Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-357 |
| Cow position: | chr21:404480-404234 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 104-366 |
| Cow position: | chr21:27287102-27287364 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 104-366 |
| Cow position: | chr21:30564874-30565139 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 136 |
| Conread position: | 104-366 |
| Cow position: | chr21:33710379-33710115 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 137 |
| Conread position: | 104-375 |
| Cow position: | chr21:34180977-34180704 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr21:27608580-27608302 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 130 |
| Conread position: | 116-357 |
| Cow position: | chr21:12099664-12099910 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 126 |
| Conread position: | 116-366 |
| Cow position: | chr21:48530300-48530553 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 125 |
| Conread position: | 120-357 |
| Cow position: | chr21:13112255-13112014 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 114 |
| Conread position: | 148-357 |
| Cow position: | chr21:47971982-47971771 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 341-746 |
| Cow position: | chr21:22456701-22457103 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 369-621 |
| Cow position: | chr21:33653327-33653582 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 374-595 |
| Cow position: | chr21:36507278-36507058 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 130 |
| Conread position: | 375-626 |
| Cow position: | chr21:10186726-10186977 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 375-750 |
| Cow position: | chr21:28660886-28660496 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 375-751 |
| Cow position: | chr21:14121614-14121222 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 161, 35 |
| Conread position: | 382-626 |
| Cow position: | chr21:46292529-46292770 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 383-599 |
| Cow position: | chr21:47662989-47663205 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 390-750 |
| Cow position: | chr21:2389502-2389868 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 140, 158 |
| Conread position: | 392-624 |
| Cow position: | chr21:12313851-12314089 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 403-752 |
| Cow position: | chr21:15532903-15533266 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 198, 71 |
Show alignments to all cow chromosomes.