Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-366 |
| Cow position: | chr24:19688546-19688281 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr24:20367400-20367679 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr24:22794592-22794872 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 117-366 |
| Cow position: | chr24:12570958-12571209 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 117-379 |
| Cow position: | chr24:5863306-5863042 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 120-356 |
| Cow position: | chr24:19643343-19643582 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 148-366 |
| Cow position: | chr24:42938881-42938659 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 350-613 |
| Cow position: | chr24:34197239-34197502 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 184, 12 |
| Conread position: | 368-750 |
| Cow position: | chr24:22643353-22643736 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 375-565 |
| Cow position: | chr24:17955051-17954860 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 114, 155 |
| Conread position: | 375-734 |
| Cow position: | chr24:37434453-37434080 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 376-652 |
| Cow position: | chr24:38620227-38620510 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 376-732 |
| Cow position: | chr24:16564074-16564454 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 377-543 |
| Cow position: | chr24:29062780-29062613 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 141, 40 |
| Conread position: | 377-603 |
| Cow position: | chr24:16580236-16580463 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 183 |
| Conread position: | 382-599 |
| Cow position: | chr24:7189265-7189047 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 384-749 |
| Cow position: | chr24:17418295-17418671 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 384-750 |
| Cow position: | chr24:16537269-16536886 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 388-750 |
| Cow position: | chr24:39048699-39048314 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 174 |
| Conread position: | 390-625 |
| Cow position: | chr24:35845495-35845260 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 390-753 |
| Cow position: | chr24:15344562-15344935 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 408-626 |
| Cow position: | chr24:30278207-30278430 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 142, 81 |
| Conread position: | 413-624 |
| Cow position: | chr24:21555500-21555709 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 188, 134 |
| Conread position: | 415-610 |
| Cow position: | chr24:43658851-43659049 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 113, 65 |
Show alignments to all cow chromosomes.