Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-363 |
| Cow position: | chr28:9288406-9288144 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 136 |
| Conread position: | 104-363 |
| Cow position: | chr28:22791468-22791731 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 111, 81 |
| Conread position: | 104-366 |
| Cow position: | chr28:8717966-8717701 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr28:20935426-20935160 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 104-366 |
| Cow position: | chr28:29036665-29036400 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-368 |
| Cow position: | chr28:30097865-30098131 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-379 |
| Cow position: | chr28:6478206-6478486 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr28:7907558-7907279 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 114-363 |
| Cow position: | chr28:28598219-28598467 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 165, 29 |
| Conread position: | 116-379 |
| Cow position: | chr28:6535798-6535531 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 116-379 |
| Cow position: | chr28:12217289-12217022 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 6 |
| Conread position: | 117-363 |
| Cow position: | chr28:10772085-10772332 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 117-366 |
| Cow position: | chr28:13462963-13463215 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 124 |
| Conread position: | 121-366 |
| Cow position: | chr28:33768030-33768277 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 341-532 |
| Cow position: | chr28:26548333-26548530 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 368-750 |
| Cow position: | chr28:20542762-20543150 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 369-723 |
| Cow position: | chr28:589216-588842 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 127, 118 |
| Conread position: | 375-626 |
| Cow position: | chr28:22536159-22535904 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 111 |
| Conread position: | 375-744 |
| Cow position: | chr28:22466156-22465766 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 375-752 |
| Cow position: | chr28:32633704-32633311 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 150, 174 |
| Conread position: | 382-749 |
| Cow position: | chr28:33134359-33134730 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 165, 52 |
| Conread position: | 382-750 |
| Cow position: | chr28:13365886-13366255 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 383-625 |
| Cow position: | chr28:28598922-28599166 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 167, 235 |
| Conread position: | 383-640 |
| Cow position: | chr28:27723653-27723912 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 385-599 |
| Cow position: | chr28:17940401-17940177 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 390-748 |
| Cow position: | chr28:22610078-22610450 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 88 |
| Conread position: | 391-626 |
| Cow position: | chr28:22370188-22370424 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 213, 98 |
| Conread position: | 392-510 |
| Cow position: | chr28:24317365-24317247 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 396-750 |
| Cow position: | chr28:13688881-13689239 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 74 |
Show alignments to all cow chromosomes.