Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 101-363 |
| Cow position: | chr29:21226932-21227196 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 104-366 |
| Cow position: | chr29:4163646-4163911 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr29:16036459-16036194 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr29:19525331-19525067 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr29:726687-726967 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr29:7847347-7847630 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr29:32556786-32556506 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 112, 136 |
| Conread position: | 116-366 |
| Cow position: | chr29:28657397-28657145 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 116-366 |
| Cow position: | chr29:35956331-35956079 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 6 |
| Conread position: | 116-367 |
| Cow position: | chr29:32291564-32291818 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 117-366 |
| Cow position: | chr29:5240365-5240617 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 124 |
| Conread position: | 117-366 |
| Cow position: | chr29:45462204-45462456 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 123-363 |
| Cow position: | chr29:29616129-29615888 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 148-366 |
| Cow position: | chr29:18266480-18266262 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 156-366 |
| Cow position: | chr29:3548762-3548975 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 336-746 |
| Cow position: | chr29:37438770-37439194 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 256, 24 |
| Conread position: | 374-633 |
| Cow position: | chr29:39293403-39293139 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 384-750 |
| Cow position: | chr29:12863160-12862784 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 390-613 |
| Cow position: | chr29:6437660-6437885 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 192 |
| Conread position: | 392-599 |
| Cow position: | chr29:35227337-35227128 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 397-628 |
| Cow position: | chr29:4765496-4765272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 32 |
Show alignments to all cow chromosomes.