Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-363 |
| Cow position: | chr4:36026593-36026331 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr4:23304664-23304399 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr4:25596808-25596543 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr4:43883771-43884035 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 109, 136 |
| Conread position: | 104-379 |
| Cow position: | chr4:7779077-7779357 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr4:62907344-62907065 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 107-366 |
| Cow position: | chr4:49419375-49419114 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 171, 31 |
| Conread position: | 116-366 |
| Cow position: | chr4:67393917-67394169 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 117-366 |
| Cow position: | chr4:37785992-37786244 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 119 |
| Conread position: | 117-379 |
| Cow position: | chr4:42331031-42330764 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 116 |
| Conread position: | 347-734 |
| Cow position: | chr4:59070919-59070521 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 374-751 |
| Cow position: | chr4:52252918-52253305 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 375-598 |
| Cow position: | chr4:10856581-10856805 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 375-750 |
| Cow position: | chr4:31937002-31937396 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 375-750 |
| Cow position: | chr4:34020919-34021308 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 375-750 |
| Cow position: | chr4:44380179-44379786 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 151, 29 |
| Conread position: | 376-526 |
| Cow position: | chr4:65142547-65142395 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 382-529 |
| Cow position: | chr4:11112583-11112437 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 383-768 |
| Cow position: | chr4:35039346-35038937 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 168, 52 |
| Conread position: | 390-527 |
| Cow position: | chr4:17616128-17615991 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 390-768 |
| Cow position: | chr4:19451464-19451064 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 77, 144 |
| Conread position: | 395-749 |
| Cow position: | chr4:61537408-61537763 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 164, 62 |
| Conread position: | 395-751 |
| Cow position: | chr4:44046961-44047314 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 198, 46 |
| Conread position: | 396-624 |
| Cow position: | chr4:16246536-16246305 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 186 |
| Conread position: | 397-749 |
| Cow position: | chr4:2598667-2598329 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 413-526 |
| Cow position: | chr4:22674690-22674804 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 417-748 |
| Cow position: | chr4:3720622-3720287 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 135, 237 |
Show alignments to all cow chromosomes.