Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-362 |
| Cow position: | chr6:15154026-15154286 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 130, 105 |
| Conread position: | 104-366 |
| Cow position: | chr6:19713318-19713053 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr6:22737791-22737525 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr6:37387494-37387759 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr6:39331615-39331350 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr6:39912241-39912505 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr6:49826336-49826056 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-386 |
| Cow position: | chr6:26772205-26771919 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 116-366 |
| Cow position: | chr6:28064920-28065172 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 116-377 |
| Cow position: | chr6:9840201-9839943 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 120 |
| Conread position: | 116-379 |
| Cow position: | chr6:16050361-16050097 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 6 |
| Conread position: | 117-366 |
| Cow position: | chr6:39999528-39999276 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 123 |
| Conread position: | 117-366 |
| Cow position: | chr6:57181749-57181999 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 124 |
| Conread position: | 117-380 |
| Cow position: | chr6:25790770-25790502 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 124 |
| Conread position: | 369-626 |
| Cow position: | chr6:53380771-53381029 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 64 |
| Conread position: | 369-750 |
| Cow position: | chr6:49064126-49064506 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 232, 156 |
| Conread position: | 373-750 |
| Cow position: | chr6:17172130-17172528 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 150 |
| Conread position: | 374-597 |
| Cow position: | chr6:52081786-52081561 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 140 |
| Conread position: | 375-579 |
| Cow position: | chr6:34617234-34617034 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 375-625 |
| Cow position: | chr6:18462895-18462640 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 29 |
| Conread position: | 375-625 |
| Cow position: | chr6:36826266-36826516 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 194, 67 |
| Conread position: | 375-728 |
| Cow position: | chr6:6998907-6999276 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 185, 55 |
| Conread position: | 375-750 |
| Cow position: | chr6:54139958-54139572 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 160, 89 |
| Conread position: | 383-532 |
| Cow position: | chr6:48473339-48473488 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 383-603 |
| Cow position: | chr6:55845474-55845693 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 132, 157 |
| Conread position: | 383-746 |
| Cow position: | chr6:29503553-29503926 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 105 |
| Conread position: | 389-626 |
| Cow position: | chr6:5340552-5340792 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 389-626 |
| Cow position: | chr6:6039490-6039732 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 390-750 |
| Cow position: | chr6:23008532-23008153 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 420-746 |
| Cow position: | chr6:31850377-31850041 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 187 |
| Conread position: | 435-736 |
| Cow position: | chr6:58041797-58042100 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 435-757 |
| Cow position: | chr6:50600921-50601247 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 50 |
Show alignments to all cow chromosomes.