Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 99-379 |
| Cow position: | chr7:27099267-27098983 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 102-379 |
| Cow position: | chr7:65557412-65557130 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 104-366 |
| Cow position: | chr7:21124662-21124397 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 137 |
| Conread position: | 104-366 |
| Cow position: | chr7:21989642-21989907 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr7:36343775-36343510 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-366 |
| Cow position: | chr7:45170543-45170808 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 136 |
| Conread position: | 104-366 |
| Cow position: | chr7:53070138-53070400 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 165, 108 |
| Conread position: | 104-366 |
| Cow position: | chr7:55041521-55041785 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr7:12904-12624 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr7:844929-845209 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr7:25415943-25416223 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 116-366 |
| Cow position: | chr7:26927155-26926904 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 130-369 |
| Cow position: | chr7:57209830-57209587 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 150-363 |
| Cow position: | chr7:48105083-48105297 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 369-526 |
| Cow position: | chr7:25015852-25015696 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 369-624 |
| Cow position: | chr7:25024559-25024303 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 159, 92 |
| Conread position: | 369-649 |
| Cow position: | chr7:51923136-51923411 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 232, 24 |
| Conread position: | 374-600 |
| Cow position: | chr7:58656568-58656803 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 94, 218 |
| Conread position: | 375-626 |
| Cow position: | chr7:63121085-63120829 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 154, 176 |
| Conread position: | 376-633 |
| Cow position: | chr7:37783257-37782995 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 381-599 |
| Cow position: | chr7:24224524-24224745 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 384-626 |
| Cow position: | chr7:34757990-34758234 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 390-603 |
| Cow position: | chr7:21875892-21875680 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 77 |
| Conread position: | 390-750 |
| Cow position: | chr7:57038454-57038083 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 400-728 |
| Cow position: | chr7:61044027-61043691 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 412-749 |
| Cow position: | chr7:46917585-46917923 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 193, 110 |
| Conread position: | 412-750 |
| Cow position: | chr7:32420211-32420570 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 429-751 |
| Cow position: | chr7:24546008-24546340 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 51 |
Show alignments to all cow chromosomes.