Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042K20.5 |
| Conread position: | 851-970 |
| Cow position: | chr17:32349294-32349174 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 851-970 |
| Cow position: | chr17:35457587-35457708 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 852-971 |
| Cow position: | chr17:40852197-40852078 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 855-961 |
| Cow position: | chr17:20887249-20887135 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 855-964 |
| Cow position: | chr17:3364816-3364706 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 855-967 |
| Cow position: | chr17:35311746-35311638 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 855-968 |
| Cow position: | chr17:6317880-6317993 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:10414720-10414607 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:12946132-12946243 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:18673810-18673931 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:20929471-20929350 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:24612872-24612759 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:33653466-33653576 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:38736658-38736547 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 855-968 |
| Cow position: | chr17:40772057-40771939 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 855-969 |
| Cow position: | chr17:29292163-29292274 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:1025607-1025718 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:7865052-7864931 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:8809281-8809398 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:12201019-12200904 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 855-970 |
| Cow position: | chr17:13478377-13478489 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:17822314-17822197 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 855-970 |
| Cow position: | chr17:24987429-24987313 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:25473054-25473173 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:29356016-29356133 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 855-970 |
| Cow position: | chr17:33275532-33275643 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 855-971 |
| Cow position: | chr17:13922709-13922595 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 855-1004 |
| Cow position: | chr17:11985659-11985805 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 855-1008 |
| Cow position: | chr17:21718770-21718928 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 855-1012 |
| Cow position: | chr17:10825703-10825546 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 855-1016 |
| Cow position: | chr17:43717113-43717274 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 855-1021 |
| Cow position: | chr17:9372351-9372518 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 119, 136 |
| Conread position: | 856-965 |
| Cow position: | chr17:24862681-24862570 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 856-970 |
| Cow position: | chr17:21039782-21039664 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 856-1004 |
| Cow position: | chr17:5372306-5372454 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 144, 116 |
| Conread position: | 857-970 |
| Cow position: | chr17:26225253-26225134 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 858-965 |
| Cow position: | chr17:7554043-7554152 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 858-970 |
| Cow position: | chr17:25126568-25126457 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 858-975 |
| Cow position: | chr17:18775965-18776084 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 117 |
| Conread position: | 858-991 |
| Cow position: | chr17:11920805-11920944 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 858-1007 |
| Cow position: | chr17:23257489-23257634 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 859-968 |
| Cow position: | chr17:3541931-3541818 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 861-968 |
| Cow position: | chr17:11912284-11912394 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 861-970 |
| Cow position: | chr17:21677941-21678051 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 878-971 |
| Cow position: | chr17:12219742-12219833 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.