Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043L16.5.5 |
| Conread position: | 396-795 |
| Cow position: | chr12:17622870-17622459 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 422-687 |
| Cow position: | chr12:3158549-3158293 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 428-701 |
| Cow position: | chr12:7262600-7262330 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 428-733 |
| Cow position: | chr12:26236371-26236665 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 429-770 |
| Cow position: | chr12:27353557-27353234 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 257, 17 |
| Conread position: | 443-687 |
| Cow position: | chr12:37444172-37444418 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 176 |
| Conread position: | 443-801 |
| Cow position: | chr12:34490884-34490540 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 444-604 |
| Cow position: | chr12:48450808-48450969 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 444-611 |
| Cow position: | chr12:40018127-40017961 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 444-625 |
| Cow position: | chr12:37566085-37566265 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 444-626 |
| Cow position: | chr12:12296497-12296676 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 444-627 |
| Cow position: | chr12:18217674-18217493 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 444-630 |
| Cow position: | chr12:39147258-39147072 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 444-645 |
| Cow position: | chr12:13965114-13964915 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 444-658 |
| Cow position: | chr12:37095616-37095831 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-659 |
| Cow position: | chr12:4782079-4781868 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 444-661 |
| Cow position: | chr12:19453735-19453955 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-663 |
| Cow position: | chr12:19221544-19221325 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 444-686 |
| Cow position: | chr12:34788731-34788489 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 444-689 |
| Cow position: | chr12:6551508-6551739 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 444-689 |
| Cow position: | chr12:34137463-34137221 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 444-690 |
| Cow position: | chr12:37180619-37180863 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 444-696 |
| Cow position: | chr12:20107661-20107422 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 444-696 |
| Cow position: | chr12:22133878-22133627 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-697 |
| Cow position: | chr12:31035499-31035750 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 444-700 |
| Cow position: | chr12:45040053-45040305 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 444-702 |
| Cow position: | chr12:12027232-12026980 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 444-705 |
| Cow position: | chr12:25357574-25357311 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 444-716 |
| Cow position: | chr12:6664607-6664338 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 444-732 |
| Cow position: | chr12:24538011-24538290 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 444-756 |
| Cow position: | chr12:16746798-16747103 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 444-759 |
| Cow position: | chr12:19252158-19251826 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 444-762 |
| Cow position: | chr12:34515881-34515557 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 444-763 |
| Cow position: | chr12:8589787-8590103 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 444-770 |
| Cow position: | chr12:16340109-16339779 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 444-770 |
| Cow position: | chr12:40693897-40693564 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 10, 192 |
| Conread position: | 444-771 |
| Cow position: | chr12:40813633-40813313 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 444-792 |
| Cow position: | chr12:40284056-40284413 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 444-794 |
| Cow position: | chr12:22213762-22213406 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-801 |
| Cow position: | chr12:4831486-4831832 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 444-802 |
| Cow position: | chr12:7398696-7399058 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 444-802 |
| Cow position: | chr12:12877002-12876654 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 444-807 |
| Cow position: | chr12:13225321-13225683 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 444-827 |
| Cow position: | chr12:16401743-16402124 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 444-827 |
| Cow position: | chr12:25925743-25925374 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 444-841 |
| Cow position: | chr12:12297608-12297222 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 444-844 |
| Cow position: | chr12:40435509-40435112 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 445-639 |
| Cow position: | chr12:17421239-17421433 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 446-701 |
| Cow position: | chr12:7212409-7212156 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 446-770 |
| Cow position: | chr12:26753390-26753720 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 446-837 |
| Cow position: | chr12:3705759-3706173 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 285 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 447-769 |
| Cow position: | chr12:43689697-43689379 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 448-659 |
| Cow position: | chr12:37893536-37893755 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 448-682 |
| Cow position: | chr12:34414622-34414853 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 448-687 |
| Cow position: | chr12:17322625-17322857 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 448-787 |
| Cow position: | chr12:16649253-16649590 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 448-802 |
| Cow position: | chr12:28841647-28841998 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 449-792 |
| Cow position: | chr12:25531723-25532072 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 450-661 |
| Cow position: | chr12:3075588-3075384 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 452-664 |
| Cow position: | chr12:4601839-4602059 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 452-691 |
| Cow position: | chr12:14736348-14736584 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 185, 97 |
| Conread position: | 452-746 |
| Cow position: | chr12:18524685-18524408 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 232, 32 |
| Conread position: | 452-798 |
| Cow position: | chr12:12737654-12737302 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 452-802 |
| Cow position: | chr12:13621913-13622258 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 185, 29 |
| Conread position: | 453-713 |
| Cow position: | chr12:28429350-28429089 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 453-759 |
| Cow position: | chr12:16722150-16721848 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 453-759 |
| Cow position: | chr12:16842863-16842563 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 454-642 |
| Cow position: | chr12:15908885-15908700 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 454-670 |
| Cow position: | chr12:42565483-42565696 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 454-690 |
| Cow position: | chr12:30857473-30857242 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 454-691 |
| Cow position: | chr12:29067140-29067370 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 455-683 |
| Cow position: | chr12:37516267-37516040 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 455-696 |
| Cow position: | chr12:37114449-37114213 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 455-706 |
| Cow position: | chr12:41965181-41964935 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 455-786 |
| Cow position: | chr12:5901470-5901806 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 455-792 |
| Cow position: | chr12:40797044-40797383 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 455-795 |
| Cow position: | chr12:12311477-12311141 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 455-795 |
| Cow position: | chr12:18003225-18002881 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 455-800 |
| Cow position: | chr12:12264425-12264779 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 455-802 |
| Cow position: | chr12:27387886-27388237 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 455-858 |
| Cow position: | chr12:10665436-10665033 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 456-685 |
| Cow position: | chr12:17410526-17410299 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 456-722 |
| Cow position: | chr12:20254403-20254666 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 456-755 |
| Cow position: | chr12:17782812-17782515 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 456-767 |
| Cow position: | chr12:40248312-40248626 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 456-795 |
| Cow position: | chr12:6420675-6421002 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 32 |
| Conread position: | 456-800 |
| Cow position: | chr12:3828417-3828760 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 457-645 |
| Cow position: | chr12:27078581-27078395 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 457-706 |
| Cow position: | chr12:8874666-8874420 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 457-789 |
| Cow position: | chr12:5762985-5763326 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 458-701 |
| Cow position: | chr12:40648051-40648285 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 458-801 |
| Cow position: | chr12:5506671-5506335 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 459-802 |
| Cow position: | chr12:39708256-39708598 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 160, 33 |
| Conread position: | 461-671 |
| Cow position: | chr12:14745678-14745471 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 461-697 |
| Cow position: | chr12:33777289-33777056 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 461-711 |
| Cow position: | chr12:29694768-29694523 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 202, 27 |
| Conread position: | 461-719 |
| Cow position: | chr12:28828562-28828816 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 463-770 |
| Cow position: | chr12:40180888-40180592 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 464-844 |
| Cow position: | chr12:36960936-36960550 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 466-715 |
| Cow position: | chr12:45617417-45617182 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 467-859 |
| Cow position: | chr12:29234504-29234900 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 470-835 |
| Cow position: | chr12:38344332-38343963 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 479-696 |
| Cow position: | chr12:2978038-2977817 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 479-729 |
| Cow position: | chr12:30597496-30597242 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 480-665 |
| Cow position: | chr12:22276502-22276681 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 129 |
| Conread position: | 480-692 |
| Cow position: | chr12:7025674-7025886 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 482-802 |
| Cow position: | chr12:10930224-10930539 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 65, 216 |
| Conread position: | 484-669 |
| Cow position: | chr12:26297826-26298008 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 484-671 |
| Cow position: | chr12:27921128-27920949 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 484-680 |
| Cow position: | chr12:10791923-10792123 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 484-697 |
| Cow position: | chr12:34876728-34876942 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 150 |
| Conread position: | 484-802 |
| Cow position: | chr12:16251487-16251802 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 273, 141 |
| Conread position: | 486-671 |
| Cow position: | chr12:43135027-43135215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 486-696 |
| Cow position: | chr12:7096269-7096057 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 148 |
| Conread position: | 486-715 |
| Cow position: | chr12:26192376-26192147 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 486-776 |
| Cow position: | chr12:23242153-23242450 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 486-789 |
| Cow position: | chr12:40172254-40171955 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 486-797 |
| Cow position: | chr12:19741255-19740943 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 207, 19 |
| Conread position: | 486-798 |
| Cow position: | chr12:8889165-8888856 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 486-801 |
| Cow position: | chr12:6118926-6118605 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 486-802 |
| Cow position: | chr12:7136963-7136640 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 486-802 |
| Cow position: | chr12:40229908-40229591 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 487-647 |
| Cow position: | chr12:14305672-14305499 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 488-797 |
| Cow position: | chr12:11750127-11749825 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 175, 45 |
| Conread position: | 489-790 |
| Cow position: | chr12:38026064-38025749 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 489-791 |
| Cow position: | chr12:8168494-8168797 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 489-853 |
| Cow position: | chr12:1331044-1331415 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 173 |
| Conread position: | 490-702 |
| Cow position: | chr12:29426708-29426496 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 198, 99 |
| Conread position: | 490-759 |
| Cow position: | chr12:18286520-18286236 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 234 |
| Conread position: | 490-795 |
| Cow position: | chr12:21186626-21186309 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 140 |
| Conread position: | 490-796 |
| Cow position: | chr12:25884469-25884170 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 214, 39 |
| Conread position: | 492-688 |
| Cow position: | chr12:39416754-39416950 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 492-688 |
| Cow position: | chr12:47532673-47532474 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 492-798 |
| Cow position: | chr12:4795764-4795453 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 197, 43 |
| Conread position: | 493-770 |
| Cow position: | chr12:31029181-31028906 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 494-681 |
| Cow position: | chr12:47823577-47823766 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 496-848 |
| Cow position: | chr12:9252789-9253141 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 259 |
| Conread position: | 500-646 |
| Cow position: | chr12:11327563-11327712 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 500-727 |
| Cow position: | chr12:6144497-6144729 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 504-761 |
| Cow position: | chr12:3840538-3840783 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 504-795 |
| Cow position: | chr12:8019726-8020024 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 504-796 |
| Cow position: | chr12:23787056-23786758 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 43, 190 |
| Conread position: | 504-835 |
| Cow position: | chr12:41462418-41462090 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 508-775 |
| Cow position: | chr12:310337-310604 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 513-691 |
| Cow position: | chr12:30570582-30570763 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 515-691 |
| Cow position: | chr12:39427588-39427761 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 518-702 |
| Cow position: | chr12:39073221-39073409 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 519-802 |
| Cow position: | chr12:15734225-15734501 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 521-690 |
| Cow position: | chr12:19006337-19006166 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 521-706 |
| Cow position: | chr12:38825769-38825582 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 180 |
| Conread position: | 525-690 |
| Cow position: | chr12:42194186-42194355 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 526-705 |
| Cow position: | chr12:47861950-47861773 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 543-839 |
| Cow position: | chr12:7076388-7076067 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 82, 88 |
| Conread position: | 544-797 |
| Cow position: | chr12:16741070-16741326 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 145, 106 |
| Conread position: | 544-797 |
| Cow position: | chr12:41972589-41972847 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 545-704 |
| Cow position: | chr12:30029562-30029719 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 132, 137 |
| Conread position: | 545-705 |
| Cow position: | chr12:40164197-40164034 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 545-858 |
| Cow position: | chr12:38109574-38109893 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 141, 199 |
| Conread position: | 546-802 |
| Cow position: | chr12:44779076-44779330 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 226, 72 |
| Conread position: | 550-793 |
| Cow position: | chr12:20314905-20314666 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 213, 46 |
| Conread position: | 559-795 |
| Cow position: | chr12:26319172-26318923 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 129, 139 |
| Conread position: | 568-806 |
| Cow position: | chr12:6785495-6785262 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 152, 98 |
| Conread position: | 582-802 |
| Cow position: | chr12:15495517-15495734 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 593-800 |
| Cow position: | chr12:19188953-19189160 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 185, 16 |
| Conread position: | 629-802 |
| Cow position: | chr12:27376030-27375849 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.