Cow genome map

Conread name: Ss1.1-Pig4-TMW8043L16.5.5

Conread position: 397-802
Cow position: chr17:3397950-3397529 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 150, 53

Conread position: 422-820
Cow position: chr17:30753334-30752932 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 425-876
Cow position: chr17:32641975-32642419 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 295
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 19

Conread position: 428-820
Cow position: chr17:29510298-29509915 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 12

Conread position: 430-657
Cow position: chr17:27324105-27323874 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 55

Conread position: 431-699
Cow position: chr17:8704958-8705222 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 39

Conread position: 431-758
Cow position: chr17:18553872-18553572 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 15

Conread position: 431-770
Cow position: chr17:26447742-26448082 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 60

Conread position: 441-713
Cow position: chr17:29405228-29405496 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 38

Conread position: 441-758
Cow position: chr17:32440752-32441073 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 442-802
Cow position: chr17:26242665-26242320 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 43

Conread position: 443-686
Cow position: chr17:35254855-35254615 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 11, 43

Conread position: 443-697
Cow position: chr17:32454752-32455002 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 39

Conread position: 444-629
Cow position: chr17:9742835-9743019 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 41

Conread position: 444-633
Cow position: chr17:36957479-36957666 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 23

Conread position: 444-643
Cow position: chr17:19025196-19024999 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 38

Conread position: 444-647
Cow position: chr17:18138733-18138937 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 45

Conread position: 444-653
Cow position: chr17:7700184-7700393 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 38

Conread position: 444-670
Cow position: chr17:32219705-32219483 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 41

Conread position: 444-671
Cow position: chr17:32133262-32133483 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 46

Conread position: 444-675
Cow position: chr17:28140903-28141133 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 41

Conread position: 444-676
Cow position: chr17:695901-695675 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 37

Conread position: 444-681
Cow position: chr17:38630514-38630746 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 41

Conread position: 444-682
Cow position: chr17:3891563-3891324 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 41

Conread position: 444-684
Cow position: chr17:39592804-39593039 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 38

Conread position: 444-688
Cow position: chr17:30281476-30281240 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 45

Conread position: 444-690
Cow position: chr17:26122144-26122387 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 46

Conread position: 444-690
Cow position: chr17:26476888-26477129 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 36

Conread position: 444-691
Cow position: chr17:27331004-27331251 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 105, 44

Conread position: 444-692
Cow position: chr17:21183841-21183593 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 21

Conread position: 444-692
Cow position: chr17:32514023-32513782 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 38

Conread position: 444-698
Cow position: chr17:3050110-3050342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 16

Conread position: 444-701
Cow position: chr17:26510102-26509853 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 38

Conread position: 444-705
Cow position: chr17:19598216-19597956 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 42

Conread position: 444-754
Cow position: chr17:19489346-19489046 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 35

Conread position: 444-758
Cow position: chr17:28833241-28833557 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 45

Conread position: 444-762
Cow position: chr17:42661240-42660915 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 55

Conread position: 444-773
Cow position: chr17:28224286-28223961 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 444-781
Cow position: chr17:7441293-7440966 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 209, 36

Conread position: 444-786
Cow position: chr17:42349753-42349416 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 42

Conread position: 444-792
Cow position: chr17:29158711-29158362 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 38

Conread position: 444-793
Cow position: chr17:20006920-20007272 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 10, 31

Conread position: 444-795
Cow position: chr17:25884402-25884760 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 444-795
Cow position: chr17:32531065-32530713 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 38

Conread position: 444-795
Cow position: chr17:35550113-35550468 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 38

Conread position: 444-795
Cow position: chr17:40080154-40080512 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 50

Conread position: 444-796
Cow position: chr17:9903674-9904023 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 444-796
Cow position: chr17:26519575-26519235 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 10, 45

Conread position: 444-796
Cow position: chr17:37029958-37029610 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 444-797
Cow position: chr17:35998386-35998016 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 237

Conread position: 444-798
Cow position: chr17:22564509-22564858 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 46

Conread position: 444-802
Cow position: chr17:12974789-12974432 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 98

Conread position: 444-802
Cow position: chr17:28543963-28544311 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 38

Conread position: 444-802
Cow position: chr17:29780082-29779725 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 444-805
Cow position: chr17:646231-645864 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 123

Conread position: 444-819
Cow position: chr17:28183250-28182874 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 31

Conread position: 444-834
Cow position: chr17:26344102-26343721 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 37

Conread position: 444-835
Cow position: chr17:30111086-30111502 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 386

Conread position: 444-858
Cow position: chr17:31852728-31853134 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 445-620
Cow position: chr17:11691121-11690950 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 36

Conread position: 445-629
Cow position: chr17:30410678-30410489 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 37

Conread position: 445-685
Cow position: chr17:26555048-26554811 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 37

Conread position: 445-691
Cow position: chr17:42488415-42488650 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 15

Conread position: 445-715
Cow position: chr17:32500882-32500622 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 37

Conread position: 445-795
Cow position: chr17:32307794-32308152 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 9, 37

Conread position: 445-802
Cow position: chr17:29274666-29275031 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 446-624
Cow position: chr17:9660538-9660362 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 41

Conread position: 446-691
Cow position: chr17:28209757-28210002 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 37

Conread position: 446-719
Cow position: chr17:37735067-37734798 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 6, 40

Conread position: 446-797
Cow position: chr17:1083845-1084186 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 35

Conread position: 446-802
Cow position: chr17:29830091-29830444 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 43

Conread position: 447-687
Cow position: chr17:27394052-27394301 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 448-645
Cow position: chr17:19906824-19907019 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 42

Conread position: 448-650
Cow position: chr17:13130337-13130135 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 38

Conread position: 448-654
Cow position: chr17:11776489-11776695 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 37

Conread position: 448-662
Cow position: chr17:28467530-28467737 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 31

Conread position: 448-680
Cow position: chr17:32150163-32150387 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 40

Conread position: 448-685
Cow position: chr17:18730500-18730265 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 42

Conread position: 448-685
Cow position: chr17:29919814-29919587 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 42

Conread position: 448-690
Cow position: chr17:10321634-10321392 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 61

Conread position: 448-694
Cow position: chr17:33026316-33026565 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 33

Conread position: 448-706
Cow position: chr17:30810643-30810894 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 40

Conread position: 448-767
Cow position: chr17:20695975-20696290 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 41

Conread position: 448-770
Cow position: chr17:12975300-12974992 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 46

Conread position: 448-796
Cow position: chr17:41046896-41046543 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 27

Conread position: 448-802
Cow position: chr17:957778-957416 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 41

Conread position: 448-802
Cow position: chr17:29916064-29916423 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 38

Conread position: 448-802
Cow position: chr17:33414392-33414027 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 7, 37

Conread position: 448-805
Cow position: chr17:25089249-25089597 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 44

Conread position: 448-810
Cow position: chr17:26533451-26533823 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 37

Conread position: 448-874
Cow position: chr17:874482-874061 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 37

Conread position: 449-624
Cow position: chr17:28757590-28757764 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 33

Conread position: 449-626
Cow position: chr17:3862631-3862456 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 32

Conread position: 449-726
Cow position: chr17:26619121-26619402 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 33

Conread position: 449-766
Cow position: chr17:35214289-35214617 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 33

Conread position: 449-797
Cow position: chr17:32018755-32019092 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 25

Conread position: 449-835
Cow position: chr17:26289249-26289640 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 13

Conread position: 449-840
Cow position: chr17:20700410-20700018 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 37

Conread position: 450-717
Cow position: chr17:32298209-32297947 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 27

Conread position: 450-835
Cow position: chr17:37977226-37976842 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 451-711
Cow position: chr17:36207682-36207421 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 33

Conread position: 451-761
Cow position: chr17:33269437-33269127 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 29

Conread position: 451-796
Cow position: chr17:36717915-36717588 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 94, 30

Conread position: 452-604
Cow position: chr17:36845962-36846114 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 32

Conread position: 452-657
Cow position: chr17:38737079-38737282 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 28

Conread position: 452-661
Cow position: chr17:28474651-28474854 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 29

Conread position: 452-719
Cow position: chr17:11767920-11768181 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 24

Conread position: 452-769
Cow position: chr17:30377171-30377499 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 130

Conread position: 452-776
Cow position: chr17:28381545-28381231 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 29

Conread position: 452-791
Cow position: chr17:29128318-29127971 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 28

Conread position: 452-795
Cow position: chr17:26814622-26814965 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 174, 26

Conread position: 452-795
Cow position: chr17:28820956-28820622 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 26

Conread position: 452-799
Cow position: chr17:29855152-29854803 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 22

Conread position: 452-800
Cow position: chr17:1217843-1217475 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 34

Conread position: 452-800
Cow position: chr17:29959369-29959014 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 452-802
Cow position: chr17:9869259-9868904 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 115

Conread position: 452-802
Cow position: chr17:18627974-18628329 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 452-802
Cow position: chr17:35575704-35576069 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 95, 21

Conread position: 452-802
Cow position: chr17:36248810-36248477 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 24

Conread position: 452-820
Cow position: chr17:4165304-4165654 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 246, 37

Conread position: 452-845
Cow position: chr17:28240508-28240894 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 228, 29

Conread position: 453-685
Cow position: chr17:5190020-5189791 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 21

Conread position: 453-840
Cow position: chr17:13220743-13221127 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 94, 28

Conread position: 454-689
Cow position: chr17:33161878-33162107 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 92, 30

Conread position: 454-690
Cow position: chr17:29355303-29355082 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 143, 27

Conread position: 454-795
Cow position: chr17:35219580-35219243 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 20

Conread position: 455-617
Cow position: chr17:42382284-42382123 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 34

Conread position: 455-635
Cow position: chr17:21481991-21482167 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 34

Conread position: 455-661
Cow position: chr17:23491160-23490961 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 25

Conread position: 455-661
Cow position: chr17:27528278-27528467 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 455-681
Cow position: chr17:20921494-20921718 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 29

Conread position: 455-688
Cow position: chr17:3906677-3906908 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 28

Conread position: 455-695
Cow position: chr17:26838676-26838435 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 36

Conread position: 455-697
Cow position: chr17:39683141-39682905 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 93, 26

Conread position: 455-789
Cow position: chr17:28200101-28199778 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 29

Conread position: 455-794
Cow position: chr17:29453702-29454049 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 30

Conread position: 455-794
Cow position: chr17:31846118-31845771 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 26

Conread position: 455-795
Cow position: chr17:22825105-22824768 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 33

Conread position: 455-795
Cow position: chr17:28072509-28072852 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 85, 29

Conread position: 455-802
Cow position: chr17:30794782-30795133 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 455-802
Cow position: chr17:32421726-32421376 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 14

Conread position: 455-802
Cow position: chr17:38659222-38658881 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 87, 38

Conread position: 455-805
Cow position: chr17:28232699-28232338 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 26

Conread position: 455-805
Cow position: chr17:32518173-32517831 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 232, 25

Conread position: 455-820
Cow position: chr17:28212716-28212360 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 116, 29

Conread position: 455-859
Cow position: chr17:28169297-28169717 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 455-877
Cow position: chr17:5358448-5358032 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 92, 35

Conread position: 456-644
Cow position: chr17:29184158-29184346 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 28

Conread position: 456-652
Cow position: chr17:18075682-18075477 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 33

Conread position: 456-682
Cow position: chr17:28850046-28849827 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 25

Conread position: 456-706
Cow position: chr17:653038-652791 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 158, 33

Conread position: 457-657
Cow position: chr17:26017151-26017344 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 18

Conread position: 457-691
Cow position: chr17:7630569-7630336 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 27

Conread position: 457-695
Cow position: chr17:38799718-38799483 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 24

Conread position: 457-795
Cow position: chr17:33488810-33488485 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 257, 28

Conread position: 457-802
Cow position: chr17:28192502-28192147 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 29

Conread position: 457-802
Cow position: chr17:30143189-30142830 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 25

Conread position: 457-802
Cow position: chr17:31305705-31305352 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 460-609
Cow position: chr17:27231504-27231653 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 460-751
Cow position: chr17:33338420-33338721 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 183

Conread position: 461-626
Cow position: chr17:16320937-16321101 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 18

Conread position: 461-698
Cow position: chr17:19900240-19900476 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 28

Conread position: 461-795
Cow position: chr17:23042300-23042630 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 86, 24

Conread position: 461-822
Cow position: chr17:37362909-37362536 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 83, 22

Conread position: 461-848
Cow position: chr17:24800136-24799735 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 25

Conread position: 462-685
Cow position: chr17:33566317-33566103 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 463-600
Cow position: chr17:27375345-27375209 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 25

Conread position: 463-795
Cow position: chr17:28915872-28915541 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 84, 25

Conread position: 464-686
Cow position: chr17:28068167-28067945 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 102, 61

Conread position: 464-808
Cow position: chr17:40415746-40415411 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 32

Conread position: 467-689
Cow position: chr17:25894348-25894571 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 14

Conread position: 468-800
Cow position: chr17:26429193-26428858 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 470-697
Cow position: chr17:11065131-11065353 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 19

Conread position: 471-697
Cow position: chr17:33271029-33270805 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 8

Conread position: 480-790
Cow position: chr17:35246710-35246389 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 154

Conread position: 481-615
Cow position: chr17:5659528-5659389 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 482-720
Cow position: chr17:40304795-40305026 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 225, 111

Conread position: 483-678
Cow position: chr17:35121689-35121888 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 483-685
Cow position: chr17:30301349-30301144 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 95

Conread position: 484-662
Cow position: chr17:5522246-5522066 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 150

Conread position: 484-703
Cow position: chr17:41919818-41920039 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 22

Conread position: 484-711
Cow position: chr17:28480871-28481102 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 151

Conread position: 485-697
Cow position: chr17:27562956-27563171 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 485-802
Cow position: chr17:28345888-28345555 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 165

Conread position: 486-645
Cow position: chr17:26813576-26813414 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 148

Conread position: 486-656
Cow position: chr17:38179568-38179740 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 148

Conread position: 486-690
Cow position: chr17:32292969-32292760 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 112

Conread position: 486-715
Cow position: chr17:33880106-33879878 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 17

Conread position: 486-726
Cow position: chr17:836225-835992 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 211, 25

Conread position: 486-790
Cow position: chr17:1921647-1921342 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 86

Conread position: 486-802
Cow position: chr17:24229109-24228806 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 93

Conread position: 486-802
Cow position: chr17:26465869-26466188 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 77

Conread position: 486-802
Cow position: chr17:28100808-28100481 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 486-802
Cow position: chr17:35089499-35089810 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 46

Conread position: 486-841
Cow position: chr17:28885939-28886287 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 276, 38

Conread position: 487-738
Cow position: chr17:28893344-28893090 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 87

Conread position: 489-660
Cow position: chr17:23088933-23089100 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 33

Conread position: 489-682
Cow position: chr17:36244713-36244899 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 35

Conread position: 489-688
Cow position: chr17:37952720-37952519 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 187

Conread position: 489-689
Cow position: chr17:15651048-15651248 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 36

Conread position: 489-696
Cow position: chr17:25898091-25898293 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 26

Conread position: 489-701
Cow position: chr17:35366873-35366650 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 88

Conread position: 489-705
Cow position: chr17:7704342-7704121 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 489-719
Cow position: chr17:26643681-26643448 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 64, 194

Conread position: 489-755
Cow position: chr17:11794270-11794005 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 60, 84

Conread position: 489-758
Cow position: chr17:28825240-28824967 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 180, 57

Conread position: 489-795
Cow position: chr17:29833075-29832762 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 489-795
Cow position: chr17:42494360-42494665 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 95

Conread position: 489-817
Cow position: chr17:38949032-38949362 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 233

Conread position: 489-843
Cow position: chr17:28502467-28502812 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 284, 69

Conread position: 490-631
Cow position: chr17:23737943-23738086 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 121

Conread position: 490-661
Cow position: chr17:39748471-39748645 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 490-686
Cow position: chr17:31743882-31743679 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 83

Conread position: 490-688
Cow position: chr17:20135031-20134832 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 79

Conread position: 490-755
Cow position: chr17:40853371-40853635 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 31

Conread position: 490-777
Cow position: chr17:21128796-21129084 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 39

Conread position: 490-787
Cow position: chr17:26228844-26229146 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 105

Conread position: 490-792
Cow position: chr17:42283814-42283517 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 67

Conread position: 490-795
Cow position: chr17:36381964-36382277 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 11

Conread position: 490-796
Cow position: chr17:8803541-8803232 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 140

Conread position: 490-858
Cow position: chr17:22053418-22053793 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 236

Conread position: 491-802
Cow position: chr17:27836882-27837192 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 21

Conread position: 491-802
Cow position: chr17:32028373-32028061 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 63

Conread position: 491-843
Cow position: chr17:28213989-28214346 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 271, 38

Conread position: 492-706
Cow position: chr17:42349339-42349122 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 34

Conread position: 493-694
Cow position: chr17:33302784-33302574 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 493-796
Cow position: chr17:21991395-21991086 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 128

Conread position: 493-802
Cow position: chr17:29487329-29487644 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 118, 31

Conread position: 494-695
Cow position: chr17:26165754-26165957 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 189

Conread position: 495-795
Cow position: chr17:38073180-38072868 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 85

Conread position: 495-802
Cow position: chr17:21073033-21072719 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 105

Conread position: 495-803
Cow position: chr17:32306633-32306314 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 496-713
Cow position: chr17:45117150-45117371 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 496-789
Cow position: chr17:36312550-36312849 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 121

Conread position: 496-789
Cow position: chr17:36316601-36316900 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 121

Conread position: 496-800
Cow position: chr17:8924146-8923815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 171

Conread position: 496-802
Cow position: chr17:35351961-35352259 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 51, 35

Conread position: 496-805
Cow position: chr17:3328811-3329133 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 151

Conread position: 496-862
Cow position: chr17:29532384-29532008 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 188

Conread position: 497-802
Cow position: chr17:29130295-29129991 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 179

Conread position: 498-756
Cow position: chr17:30013973-30014231 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 108

Conread position: 499-711
Cow position: chr17:37513551-37513759 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 126

Conread position: 503-688
Cow position: chr17:23830465-23830651 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 67

Conread position: 503-801
Cow position: chr17:29095127-29094830 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 504-661
Cow position: chr17:31771566-31771726 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 69

Conread position: 504-723
Cow position: chr17:30770251-30770036 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 147

Conread position: 504-795
Cow position: chr17:30065416-30065697 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 20

Conread position: 504-802
Cow position: chr17:28800768-28801070 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 504-802
Cow position: chr17:41285945-41285659 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 155, 5

Conread position: 505-692
Cow position: chr17:43623718-43623537 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 505-802
Cow position: chr17:28128787-28128478 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 65

Conread position: 510-795
Cow position: chr17:4608856-4609152 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 170, 29

Conread position: 511-788
Cow position: chr17:30280499-30280237 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 95

Conread position: 512-802
Cow position: chr17:25031334-25031612 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 270, 22

Conread position: 513-691
Cow position: chr17:14287813-14287640 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 57

Conread position: 513-712
Cow position: chr17:28120949-28120749 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 21

Conread position: 513-758
Cow position: chr17:20250355-20250112 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 148

Conread position: 513-800
Cow position: chr17:30151219-30150925 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 514-691
Cow position: chr17:26161707-26161525 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 146

Conread position: 515-683
Cow position: chr17:28795725-28795548 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 515-691
Cow position: chr17:26367291-26367466 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 81

Conread position: 515-763
Cow position: chr17:25093658-25093413 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 178

Conread position: 515-835
Cow position: chr17:36123588-36123919 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 301

Conread position: 516-700
Cow position: chr17:27788025-27788210 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 149

Conread position: 516-802
Cow position: chr17:38796912-38796616 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 29

Conread position: 517-714
Cow position: chr17:35521000-35520805 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 169, 24

Conread position: 518-877
Cow position: chr17:28407514-28407163 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 87

Conread position: 519-811
Cow position: chr17:33243031-33242735 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 10

Conread position: 520-759
Cow position: chr17:4616206-4616447 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 171, 14

Conread position: 522-837
Cow position: chr17:25889362-25889046 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 45

Conread position: 524-694
Cow position: chr17:37735762-37735931 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 123

Conread position: 526-802
Cow position: chr17:170855-170588 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 55

Conread position: 533-803
Cow position: chr17:42535283-42535017 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 183, 12

Conread position: 536-689
Cow position: chr17:23790380-23790529 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 78

Conread position: 536-842
Cow position: chr17:817802-818115 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 11, 70

Conread position: 537-796
Cow position: chr17:32337615-32337340 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 149

Conread position: 538-711
Cow position: chr17:30287673-30287503 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 10

Conread position: 538-782
Cow position: chr17:9914910-9915161 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 150, 0

Conread position: 539-796
Cow position: chr17:25092200-25092460 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 140, 25

Conread position: 541-799
Cow position: chr17:28815060-28814798 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 152

Conread position: 542-840
Cow position: chr17:28035224-28035539 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 0

Conread position: 543-794
Cow position: chr17:28154029-28153776 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 64

Conread position: 543-802
Cow position: chr17:26865978-26866235 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 60

Conread position: 543-802
Cow position: chr17:29653870-29654139 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 147, 0

Conread position: 543-841
Cow position: chr17:27397536-27397841 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 150, 272

Conread position: 549-689
Cow position: chr17:26874150-26874009 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 549-802
Cow position: chr17:43695613-43695872 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 145, 168

Conread position: 551-805
Cow position: chr17:24157550-24157806 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 163, 19

Conread position: 555-858
Cow position: chr17:36836240-36836560 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 129, 26

Conread position: 558-701
Cow position: chr17:26761995-26761850 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 559-719
Cow position: chr17:26545650-26545492 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 39

Conread position: 560-675
Cow position: chr17:9769832-9769717 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 564-689
Cow position: chr17:26476220-26476344 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 567-713
Cow position: chr17:26434833-26434692 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 567-811
Cow position: chr17:27471112-27470869 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 191, 46

Conread position: 572-835
Cow position: chr17:25098623-25098360 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 61

Conread position: 572-897
Cow position: chr17:26314402-26314722 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 190, 16

Conread position: 573-802
Cow position: chr17:32144323-32144560 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 177

Conread position: 575-757
Cow position: chr17:28649759-28649581 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 15

Conread position: 577-691
Cow position: chr17:28347727-28347613 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 577-745
Cow position: chr17:34064783-34064617 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 116, 56

Conread position: 577-758
Cow position: chr17:33198371-33198186 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 101, 50

Conread position: 578-801
Cow position: chr17:32243618-32243846 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 115, 169

Conread position: 578-802
Cow position: chr17:32190273-32190045 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 123, 113

Conread position: 578-858
Cow position: chr17:12752033-12752319 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 143

Conread position: 593-848
Cow position: chr17:37822263-37821997 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 99

Conread position: 594-802
Cow position: chr17:21859702-21859504 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 184, 79

Conread position: 599-795
Cow position: chr17:26513691-26513885 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 175, 81

Conread position: 609-802
Cow position: chr17:43467832-43468032 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 124, 112

Conread position: 619-802
Cow position: chr17:3200814-3200628 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 50

Conread position: 625-892
Cow position: chr17:29308059-29307788 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 50

Show alignments to all cow chromosomes.