Cow genome map

Conread name: Ss1.1-Pig4-TMW8043L16.5.5

Conread position: 407-688
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 30

Conread position: 410-711
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 21

Conread position: 413-716
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 17

Conread position: 414-660
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 7, 22

Conread position: 417-802
Cow position:
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 430-688
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 56

Conread position: 432-684
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 56

Conread position: 444-625
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 45

Conread position: 444-626
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 46

Conread position: 444-659
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 36

Conread position: 444-686
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 15

Conread position: 444-688
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 444-689
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 37

Conread position: 444-693
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 10, 45

Conread position: 444-698
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 36

Conread position: 444-704
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 31

Conread position: 444-706
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 38

Conread position: 444-706
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 49

Conread position: 444-706
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 41

Conread position: 444-709
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 45

Conread position: 444-710
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 42

Conread position: 444-713
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 102, 18

Conread position: 444-714
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 39

Conread position: 444-715
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 33

Conread position: 444-787
Cow position:
Alignm length: 353
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 49

Conread position: 444-790
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 38

Conread position: 444-790
Cow position:
Alignm length: 357
Alignm identity: 232
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 43

Conread position: 444-794
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 45

Conread position: 444-796
Cow position:
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 444-796
Cow position:
Alignm length: 360
Alignm identity: 245
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 12

Conread position: 444-798
Cow position:
Alignm length: 363
Alignm identity: 237
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 40

Conread position: 444-802
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 27

Conread position: 444-803
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 35

Conread position: 444-820
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 41

Conread position: 444-834
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 46

Conread position: 444-835
Cow position:
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 445-596
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 29

Conread position: 445-675
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 46

Conread position: 445-689
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 60

Conread position: 445-792
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 37

Conread position: 445-802
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 37

Conread position: 446-795
Cow position:
Alignm length: 360
Alignm identity: 245
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 25

Conread position: 447-835
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 42

Conread position: 447-867
Cow position:
Alignm length: 437
Alignm identity: 279
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 47

Conread position: 448-659
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 40

Conread position: 448-659
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 41

Conread position: 448-682
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 33

Conread position: 448-683
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 45

Conread position: 448-713
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 28

Conread position: 448-795
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 27

Conread position: 448-800
Cow position:
Alignm length: 367
Alignm identity: 245
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 6, 31

Conread position: 448-800
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 449-880
Cow position:
Alignm length: 445
Alignm identity: 288
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 33

Conread position: 450-762
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 36

Conread position: 451-802
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 97, 35

Conread position: 452-628
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 36

Conread position: 452-662
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 10

Conread position: 452-687
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 36

Conread position: 452-690
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 92, 32

Conread position: 452-692
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 92, 31

Conread position: 452-717
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 23

Conread position: 452-800
Cow position:
Alignm length: 370
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 32

Conread position: 452-800
Cow position:
Alignm length: 361
Alignm identity: 234
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 26

Conread position: 453-668
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 27

Conread position: 453-846
Cow position:
Alignm length: 404
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 311, 21

Conread position: 454-654
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 29

Conread position: 454-661
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 32

Conread position: 455-688
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 25

Conread position: 455-696
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 34

Conread position: 455-701
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 44

Conread position: 455-727
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 34

Conread position: 455-742
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 25

Conread position: 455-752
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 23

Conread position: 455-796
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 92, 26

Conread position: 455-861
Cow position:
Alignm length: 425
Alignm identity: 292
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 37

Conread position: 456-644
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 18, 26

Conread position: 456-705
Cow position:
Alignm length: 258
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 26

Conread position: 456-754
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 259, 20

Conread position: 456-802
Cow position:
Alignm length: 355
Alignm identity: 228
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 241, 30

Conread position: 456-802
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 183

Conread position: 457-786
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 180, 29

Conread position: 458-800
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 25

Conread position: 461-761
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 33, 149

Conread position: 461-795
Cow position:
Alignm length: 348
Alignm identity: 225
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 30

Conread position: 463-844
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 26

Conread position: 464-795
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 26

Conread position: 464-803
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 79, 22

Conread position: 465-802
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 220, 24

Conread position: 482-714
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 65, 5

Conread position: 483-835
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 328

Conread position: 484-690
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 105

Conread position: 484-758
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 167

Conread position: 484-801
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 277, 40

Conread position: 486-656
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 35

Conread position: 486-688
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 486-698
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 38

Conread position: 486-845
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 486-858
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 177

Conread position: 488-660
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 36

Conread position: 489-683
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 35

Conread position: 489-796
Cow position:
Alignm length: 313
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 116

Conread position: 489-811
Cow position:
Alignm length: 341
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 46

Conread position: 490-763
Cow position:
Alignm length: 283
Alignm identity: 184
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 32

Conread position: 492-795
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 256

Conread position: 495-762
Cow position:
Alignm length: 272
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 116

Conread position: 497-835
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 316

Conread position: 499-802
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 252, 48

Conread position: 500-840
Cow position:
Alignm length: 358
Alignm identity: 251
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 47, 274

Conread position: 503-771
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 144

Conread position: 505-776
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 54

Conread position: 505-796
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 259, 29

Conread position: 513-691
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 61

Conread position: 513-805
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 88

Conread position: 515-773
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 207, 24

Conread position: 515-792
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 108

Conread position: 516-696
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 84

Conread position: 516-707
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 26, 75

Conread position: 516-877
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 23

Conread position: 517-683
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 539-802
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 20

Conread position: 539-835
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 222, 83

Conread position: 547-664
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 557-796
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 10

Conread position: 560-661
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 579-841
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 113, 53

Conread position: 603-863
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 46

Show alignments to all cow chromosomes.