Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043L16.5.5 |
| Conread position: | 412-801 |
| Cow position: | chr24:38444500-38444888 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 416-733 |
| Cow position: | chr24:15254774-15255087 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 443-690 |
| Cow position: | chr24:39769831-39769585 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 443-800 |
| Cow position: | chr24:37514483-37514119 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 444-607 |
| Cow position: | chr24:25087789-25087951 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-655 |
| Cow position: | chr24:25265345-25265551 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-657 |
| Cow position: | chr24:36223107-36223323 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 444-683 |
| Cow position: | chr24:37453951-37453715 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 444-687 |
| Cow position: | chr24:6223235-6223474 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 444-687 |
| Cow position: | chr24:20749249-20749491 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 444-689 |
| Cow position: | chr24:30965013-30964774 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 444-692 |
| Cow position: | chr24:19040167-19039922 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-697 |
| Cow position: | chr24:29043828-29044074 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 444-698 |
| Cow position: | chr24:25719431-25719176 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 444-708 |
| Cow position: | chr24:26555502-26555765 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 444-711 |
| Cow position: | chr24:43025512-43025779 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 444-714 |
| Cow position: | chr24:44875526-44875262 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 444-719 |
| Cow position: | chr24:34197493-34197769 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 444-757 |
| Cow position: | chr24:23579711-23579400 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 444-790 |
| Cow position: | chr24:37335367-37335020 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 444-796 |
| Cow position: | chr24:35638663-35638306 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-800 |
| Cow position: | chr24:15276094-15276447 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 444-801 |
| Cow position: | chr24:29200193-29199846 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 444-801 |
| Cow position: | chr24:32087487-32087141 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 444-802 |
| Cow position: | chr24:17925148-17924771 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-802 |
| Cow position: | chr24:23140319-23139970 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 444-802 |
| Cow position: | chr24:37230067-37230418 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 444-810 |
| Cow position: | chr24:18846678-18847043 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 444-819 |
| Cow position: | chr24:25607827-25608200 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 444-834 |
| Cow position: | chr24:24862179-24862569 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 444-835 |
| Cow position: | chr24:38263960-38264357 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 445-703 |
| Cow position: | chr24:24993666-24993925 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 445-796 |
| Cow position: | chr24:24614704-24615049 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 445-802 |
| Cow position: | chr24:39027864-39027515 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 446-697 |
| Cow position: | chr24:21555693-21555942 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 446-697 |
| Cow position: | chr24:29071403-29071153 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 447-705 |
| Cow position: | chr24:12193785-12193528 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 447-803 |
| Cow position: | chr24:6192754-6193105 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 448-670 |
| Cow position: | chr24:29369583-29369364 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 448-676 |
| Cow position: | chr24:9760633-9760850 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 448-689 |
| Cow position: | chr24:43777869-43778110 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 448-691 |
| Cow position: | chr24:34219925-34219690 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 448-697 |
| Cow position: | chr24:2608808-2608565 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 448-744 |
| Cow position: | chr24:44456178-44455888 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 448-770 |
| Cow position: | chr24:16303263-16302939 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 448-793 |
| Cow position: | chr24:27892077-27891731 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 448-796 |
| Cow position: | chr24:19074078-19074420 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 6, 30 |
| Conread position: | 448-802 |
| Cow position: | chr24:20289513-20289163 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 448-810 |
| Cow position: | chr24:5616124-5616480 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 448-820 |
| Cow position: | chr24:33518314-33517945 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 448-831 |
| Cow position: | chr24:37856667-37856276 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 450-664 |
| Cow position: | chr24:16297214-16296992 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 450-706 |
| Cow position: | chr24:22187433-22187190 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 450-784 |
| Cow position: | chr24:28910784-28911108 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 451-692 |
| Cow position: | chr24:31033612-31033850 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 451-802 |
| Cow position: | chr24:44363370-44363032 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 452-625 |
| Cow position: | chr24:16143560-16143732 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 452-627 |
| Cow position: | chr24:16311214-16311044 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 452-664 |
| Cow position: | chr24:16652351-16652561 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 452-706 |
| Cow position: | chr24:25894518-25894773 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 452-752 |
| Cow position: | chr24:23988231-23988525 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 452-795 |
| Cow position: | chr24:24799486-24799141 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 452-864 |
| Cow position: | chr24:43883157-43883569 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 453-797 |
| Cow position: | chr24:37434219-37433871 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 453-802 |
| Cow position: | chr24:11253927-11253595 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 244, 32 |
| Conread position: | 454-686 |
| Cow position: | chr24:17278171-17277940 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 454-762 |
| Cow position: | chr24:29390744-29390437 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 115 |
| Conread position: | 454-795 |
| Cow position: | chr24:1498822-1499152 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 243, 42 |
| Conread position: | 454-807 |
| Cow position: | chr24:18712977-18713320 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 455-605 |
| Cow position: | chr24:28037122-28037272 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 455-624 |
| Cow position: | chr24:37429533-37429710 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 455-675 |
| Cow position: | chr24:39199711-39199938 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 455-688 |
| Cow position: | chr24:6237222-6237446 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 455-706 |
| Cow position: | chr24:24455411-24455668 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 455-706 |
| Cow position: | chr24:24583107-24582851 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 455-792 |
| Cow position: | chr24:24025328-24025669 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 455-796 |
| Cow position: | chr24:39190108-39190453 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 455-802 |
| Cow position: | chr24:5891776-5891425 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 455-802 |
| Cow position: | chr24:42959278-42959624 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 456-669 |
| Cow position: | chr24:4229141-4228935 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 456-687 |
| Cow position: | chr24:9850582-9850353 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 456-776 |
| Cow position: | chr24:23153154-23153462 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 456-811 |
| Cow position: | chr24:23715853-23715501 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 457-659 |
| Cow position: | chr24:19357817-19357618 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 457-668 |
| Cow position: | chr24:38884763-38884556 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 457-684 |
| Cow position: | chr24:3224058-3224281 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 457-705 |
| Cow position: | chr24:31185660-31185904 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 459-658 |
| Cow position: | chr24:23492140-23492337 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 459-687 |
| Cow position: | chr24:37566209-37566430 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 459-703 |
| Cow position: | chr24:29760046-29760296 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 460-716 |
| Cow position: | chr24:31797415-31797663 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 460-796 |
| Cow position: | chr24:36039636-36039296 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 460-842 |
| Cow position: | chr24:24626655-24626274 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 463-761 |
| Cow position: | chr24:17633350-17633642 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 464-690 |
| Cow position: | chr24:22989801-22989577 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 465-878 |
| Cow position: | chr24:35306028-35305619 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 257, 44 |
| Conread position: | 473-696 |
| Cow position: | chr24:6003881-6003659 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 483-846 |
| Cow position: | chr24:29710987-29710616 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 484-658 |
| Cow position: | chr24:36862826-36863003 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 484-696 |
| Cow position: | chr24:169659-169866 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 158 |
| Conread position: | 484-731 |
| Cow position: | chr24:22912704-22912959 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 484-802 |
| Cow position: | chr24:32083590-32083277 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 230, 40 |
| Conread position: | 485-646 |
| Cow position: | chr24:16207461-16207299 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 486-685 |
| Cow position: | chr24:37542838-37542637 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 486-698 |
| Cow position: | chr24:6203738-6203950 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 486-771 |
| Cow position: | chr24:44137146-44136861 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 486-792 |
| Cow position: | chr24:44552636-44552952 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 264 |
| Conread position: | 486-802 |
| Cow position: | chr24:24123702-24123387 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 486-802 |
| Cow position: | chr24:25100612-25100287 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 212 |
| Conread position: | 487-792 |
| Cow position: | chr24:28608917-28608611 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 489-675 |
| Cow position: | chr24:16564348-16564541 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 489-697 |
| Cow position: | chr24:37715989-37715779 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 489-705 |
| Cow position: | chr24:43798356-43798573 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 489-706 |
| Cow position: | chr24:31117220-31117434 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 489-794 |
| Cow position: | chr24:26776634-26776332 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 489-795 |
| Cow position: | chr24:4461701-4461391 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 489-796 |
| Cow position: | chr24:3466567-3466891 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 241 |
| Conread position: | 489-852 |
| Cow position: | chr24:6112737-6112368 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 490-772 |
| Cow position: | chr24:28537236-28537522 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 491-695 |
| Cow position: | chr24:20936022-20935824 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 494-698 |
| Cow position: | chr24:5768026-5767822 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 495-680 |
| Cow position: | chr24:23161572-23161759 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 496-660 |
| Cow position: | chr24:44805832-44805999 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 496-802 |
| Cow position: | chr24:33010396-33010091 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 28 |
| Conread position: | 497-772 |
| Cow position: | chr24:28756912-28757181 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 498-834 |
| Cow position: | chr24:3243030-3243370 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 500-842 |
| Cow position: | chr24:14267267-14267609 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 142 |
| Conread position: | 505-690 |
| Cow position: | chr24:40188231-40188416 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 505-710 |
| Cow position: | chr24:15298592-15298798 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 511-803 |
| Cow position: | chr24:32230051-32229748 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 513-685 |
| Cow position: | chr24:19907421-19907594 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 513-701 |
| Cow position: | chr24:11746266-11746456 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 513-757 |
| Cow position: | chr24:37574188-37573938 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 513-763 |
| Cow position: | chr24:37532469-37532721 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 513-840 |
| Cow position: | chr24:23205532-23205198 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 184, 27 |
| Conread position: | 514-689 |
| Cow position: | chr24:24523408-24523585 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 515-691 |
| Cow position: | chr24:39498690-39498510 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 515-768 |
| Cow position: | chr24:28981154-28981402 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 218, 54 |
| Conread position: | 515-802 |
| Cow position: | chr24:36771392-36771687 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 516-762 |
| Cow position: | chr24:23807900-23808150 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 532-796 |
| Cow position: | chr24:248901-249162 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 230, 7 |
| Conread position: | 534-797 |
| Cow position: | chr24:7239993-7240260 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 153, 5 |
| Conread position: | 534-802 |
| Cow position: | chr24:43357036-43357307 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 9 |
| Conread position: | 534-835 |
| Cow position: | chr24:15272727-15272431 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 538-692 |
| Cow position: | chr24:42852582-42852734 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 540-802 |
| Cow position: | chr24:26713370-26713098 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 148, 211 |
| Conread position: | 543-795 |
| Cow position: | chr24:30065071-30064822 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 552-808 |
| Cow position: | chr24:14773624-14773876 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 554-802 |
| Cow position: | chr24:35288226-35288483 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 135, 165 |
| Conread position: | 557-777 |
| Cow position: | chr24:26039085-26038858 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 118 |
| Conread position: | 558-708 |
| Cow position: | chr24:31641692-31641840 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 558-820 |
| Cow position: | chr24:39902867-39902600 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 559-800 |
| Cow position: | chr24:36473738-36473483 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 583-802 |
| Cow position: | chr24:9978962-9978746 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 107, 170 |
| Conread position: | 611-796 |
| Cow position: | chr24:8195920-8196111 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 116 |
| Conread position: | 615-802 |
| Cow position: | chr24:24704870-24704681 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 113 |
Show alignments to all cow chromosomes.