Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043L16.5.5 |
| Conread position: | 389-711 |
| Cow position: | chr28:30077532-30077850 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 421-713 |
| Cow position: | chr28:14925739-14925447 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 428-626 |
| Cow position: | chr28:11584934-11584738 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 441-776 |
| Cow position: | chr28:11536458-11536787 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 443-693 |
| Cow position: | chr28:23020894-23020649 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 443-695 |
| Cow position: | chr28:15258731-15258484 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 443-702 |
| Cow position: | chr28:28900490-28900748 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 443-802 |
| Cow position: | chr28:4164125-4163754 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 444-589 |
| Cow position: | chr28:15058499-15058362 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 444-601 |
| Cow position: | chr28:10228079-10227918 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 153 |
| Conread position: | 444-658 |
| Cow position: | chr28:1428211-1428422 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 444-675 |
| Cow position: | chr28:22891649-22891430 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-680 |
| Cow position: | chr28:4441187-4441412 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 444-690 |
| Cow position: | chr28:9917355-9917118 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-690 |
| Cow position: | chr28:26983949-26983701 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 444-691 |
| Cow position: | chr28:5063755-5063999 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 444-703 |
| Cow position: | chr28:3871422-3871671 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 444-704 |
| Cow position: | chr28:11857225-11857488 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 7, 233 |
| Conread position: | 444-705 |
| Cow position: | chr28:27719541-27719807 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 444-710 |
| Cow position: | chr28:1522450-1522710 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 444-711 |
| Cow position: | chr28:22359259-22359522 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 444-713 |
| Cow position: | chr28:10867612-10867878 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 444-754 |
| Cow position: | chr28:20773921-20773618 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 444-758 |
| Cow position: | chr28:3733157-3733470 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 444-777 |
| Cow position: | chr28:16540651-16540975 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 444-794 |
| Cow position: | chr28:28632070-28632437 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 444-795 |
| Cow position: | chr28:17207007-17207354 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 444-795 |
| Cow position: | chr28:19373430-19373077 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 444-796 |
| Cow position: | chr28:24350128-24350460 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 159, 12 |
| Conread position: | 444-801 |
| Cow position: | chr28:23833625-23833970 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 444-802 |
| Cow position: | chr28:9126487-9126128 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 444-802 |
| Cow position: | chr28:19360539-19360167 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 444-802 |
| Cow position: | chr28:20942011-20941656 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-802 |
| Cow position: | chr28:30435363-30435021 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 444-802 |
| Cow position: | chr28:34009719-34010088 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-806 |
| Cow position: | chr28:11533191-11533575 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 444-819 |
| Cow position: | chr28:4195224-4195598 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 444-820 |
| Cow position: | chr28:22610293-22610670 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 445-628 |
| Cow position: | chr28:9219987-9220184 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 445-653 |
| Cow position: | chr28:4157008-4157216 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 445-670 |
| Cow position: | chr28:32633474-32633255 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 445-795 |
| Cow position: | chr28:16769293-16769643 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 445-843 |
| Cow position: | chr28:4136577-4136172 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 446-688 |
| Cow position: | chr28:20899293-20899054 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 446-796 |
| Cow position: | chr28:23238252-23238586 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 448-796 |
| Cow position: | chr28:27885719-27885368 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 448-800 |
| Cow position: | chr28:22668527-22668882 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 448-802 |
| Cow position: | chr28:676898-676544 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 448-802 |
| Cow position: | chr28:23291722-23291363 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 449-626 |
| Cow position: | chr28:34632458-34632628 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 449-770 |
| Cow position: | chr28:1288116-1287810 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 451-719 |
| Cow position: | chr28:23281510-23281255 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 451-802 |
| Cow position: | chr28:16558800-16559148 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 33 |
| Conread position: | 451-802 |
| Cow position: | chr28:32765706-32766056 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 452-661 |
| Cow position: | chr28:2140245-2140445 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 452-674 |
| Cow position: | chr28:25043336-25043123 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 452-686 |
| Cow position: | chr28:14898209-14898434 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 32 |
| Conread position: | 452-689 |
| Cow position: | chr28:24226583-24226821 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 452-710 |
| Cow position: | chr28:7603457-7603201 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 452-726 |
| Cow position: | chr28:5369326-5369585 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 452-797 |
| Cow position: | chr28:23096964-23097314 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 224, 12 |
| Conread position: | 452-801 |
| Cow position: | chr28:20206342-20206696 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 452-802 |
| Cow position: | chr28:1571046-1571396 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 452-827 |
| Cow position: | chr28:606812-607194 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 453-800 |
| Cow position: | chr28:10299834-10299497 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 237, 31 |
| Conread position: | 454-595 |
| Cow position: | chr28:27776524-27776393 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 454-715 |
| Cow position: | chr28:15324635-15324368 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 455-606 |
| Cow position: | chr28:4078726-4078577 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 455-795 |
| Cow position: | chr28:4023715-4024049 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 455-795 |
| Cow position: | chr28:20147771-20148112 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 455-802 |
| Cow position: | chr28:22270068-22270423 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 455-810 |
| Cow position: | chr28:31356315-31356660 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 456-664 |
| Cow position: | chr28:13179105-13179308 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 456-727 |
| Cow position: | chr28:31654691-31654958 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 456-760 |
| Cow position: | chr28:2168772-2168463 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 456-762 |
| Cow position: | chr28:23919107-23918812 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 456-802 |
| Cow position: | chr28:26621371-26621023 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 456-841 |
| Cow position: | chr28:9083956-9084360 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 457-705 |
| Cow position: | chr28:22831277-22831513 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 176, 22 |
| Conread position: | 457-792 |
| Cow position: | chr28:527221-527549 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 190, 32 |
| Conread position: | 458-683 |
| Cow position: | chr28:2825981-2826202 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 459-791 |
| Cow position: | chr28:22843383-22843728 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 55 |
| Conread position: | 459-802 |
| Cow position: | chr28:21618476-21618823 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 175, 22 |
| Conread position: | 460-690 |
| Cow position: | chr28:24510948-24510719 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 460-710 |
| Cow position: | chr28:34573805-34574055 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 460-711 |
| Cow position: | chr28:26595463-26595711 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 460-803 |
| Cow position: | chr28:22471566-22471238 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 462-691 |
| Cow position: | chr28:32278060-32278285 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 464-705 |
| Cow position: | chr28:23111657-23111895 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 464-715 |
| Cow position: | chr28:27331119-27331370 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 479-715 |
| Cow position: | chr28:1601462-1601226 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 480-720 |
| Cow position: | chr28:12856318-12856560 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 481-820 |
| Cow position: | chr28:22645550-22645880 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 482-715 |
| Cow position: | chr28:4224715-4224949 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 211, 10 |
| Conread position: | 484-708 |
| Cow position: | chr28:22564328-22564555 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 485-800 |
| Cow position: | chr28:24672953-24673275 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 486-632 |
| Cow position: | chr28:88783-88935 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 486-683 |
| Cow position: | chr28:29752953-29752753 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 486-686 |
| Cow position: | chr28:4534231-4534038 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 486-760 |
| Cow position: | chr28:8617907-8617644 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 68 |
| Conread position: | 486-794 |
| Cow position: | chr28:27130487-27130172 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 249 |
| Conread position: | 486-802 |
| Cow position: | chr28:844018-843711 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 242, 36 |
| Conread position: | 486-802 |
| Cow position: | chr28:13366135-13366450 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 81 |
| Conread position: | 486-802 |
| Cow position: | chr28:19340601-19340285 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 486-810 |
| Cow position: | chr28:20186147-20185815 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 487-800 |
| Cow position: | chr28:23126588-23126269 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 206, 67 |
| Conread position: | 488-714 |
| Cow position: | chr28:31661384-31661156 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 166 |
| Conread position: | 489-787 |
| Cow position: | chr28:12625741-12625440 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 204, 44 |
| Conread position: | 489-802 |
| Cow position: | chr28:9858470-9858790 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 170 |
| Conread position: | 489-802 |
| Cow position: | chr28:21408810-21408494 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 275, 31 |
| Conread position: | 490-661 |
| Cow position: | chr28:31230795-31230959 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 490-689 |
| Cow position: | chr28:28505262-28505467 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 490-787 |
| Cow position: | chr28:20362189-20362494 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 490-794 |
| Cow position: | chr28:34563267-34562958 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 490-841 |
| Cow position: | chr28:11078346-11078709 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 179 |
| Conread position: | 491-690 |
| Cow position: | chr28:24298337-24298134 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 491-718 |
| Cow position: | chr28:10602025-10602248 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 491-795 |
| Cow position: | chr28:20673473-20673771 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 491-818 |
| Cow position: | chr28:4826340-4826024 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 207, 49 |
| Conread position: | 493-677 |
| Cow position: | chr28:26392374-26392564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 493-802 |
| Cow position: | chr28:25139195-25138885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 494-706 |
| Cow position: | chr28:27646154-27645949 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 193, 56 |
| Conread position: | 494-762 |
| Cow position: | chr28:19467045-19467305 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 495-761 |
| Cow position: | chr28:29759003-29758735 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 496-663 |
| Cow position: | chr28:25819253-25819416 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 497-690 |
| Cow position: | chr28:30830126-30829936 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 499-698 |
| Cow position: | chr28:20374477-20374679 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 499-698 |
| Cow position: | chr28:23688617-23688415 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 503-802 |
| Cow position: | chr28:8802731-8802430 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 503-805 |
| Cow position: | chr28:33432312-33432621 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 513-792 |
| Cow position: | chr28:21537463-21537186 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 514-779 |
| Cow position: | chr28:16195598-16195342 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 515-690 |
| Cow position: | chr28:25942105-25942281 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 517-698 |
| Cow position: | chr28:11859605-11859788 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 518-802 |
| Cow position: | chr28:27679142-27679438 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 519-795 |
| Cow position: | chr28:19731459-19731173 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 520-802 |
| Cow position: | chr28:25806803-25807093 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 529-727 |
| Cow position: | chr28:13656813-13656611 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 533-723 |
| Cow position: | chr28:28137681-28137875 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 535-802 |
| Cow position: | chr28:16484064-16484338 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 542-839 |
| Cow position: | chr28:27680025-27680318 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 543-802 |
| Cow position: | chr28:3562629-3562888 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 139, 23 |
| Conread position: | 543-802 |
| Cow position: | chr28:26595880-26596146 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 543-806 |
| Cow position: | chr28:33150703-33150443 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 136, 127 |
| Conread position: | 543-848 |
| Cow position: | chr28:19296206-19295896 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 161, 194 |
| Conread position: | 544-690 |
| Cow position: | chr28:19263960-19263816 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 545-715 |
| Cow position: | chr28:11101647-11101480 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 149, 27 |
| Conread position: | 551-797 |
| Cow position: | chr28:22246067-22246324 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 139, 95 |
| Conread position: | 556-841 |
| Cow position: | chr28:23683350-23683057 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 558-796 |
| Cow position: | chr28:13873381-13873138 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 576-867 |
| Cow position: | chr28:3544696-3544392 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 582-844 |
| Cow position: | chr28:12482336-12482597 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 112, 7 |
| Conread position: | 594-802 |
| Cow position: | chr28:23095014-23095219 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 106 |
| Conread position: | 603-794 |
| Cow position: | chr28:32818043-32818236 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 608-715 |
| Cow position: | chr28:26082209-26082316 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 609-819 |
| Cow position: | chr28:22091804-22091592 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 104 |
| Conread position: | 610-835 |
| Cow position: | chr28:19372925-19372697 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 188 |
Show alignments to all cow chromosomes.