Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043L16.5.5 |
| Conread position: | 378-664 |
| Cow position: | chr29:4537695-4537982 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 397-835 |
| Cow position: | chr29:40143407-40142980 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 402-705 |
| Cow position: | chr29:9507130-9506825 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 412-625 |
| Cow position: | chr29:1582962-1582751 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 414-711 |
| Cow position: | chr29:4103518-4103228 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 421-757 |
| Cow position: | chr29:43000641-43000313 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 422-718 |
| Cow position: | chr29:20710683-20710977 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 444-595 |
| Cow position: | chr29:34389989-34389837 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 444-615 |
| Cow position: | chr29:31050525-31050695 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 444-623 |
| Cow position: | chr29:18104358-18104183 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 444-658 |
| Cow position: | chr29:30263702-30263487 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 444-683 |
| Cow position: | chr29:36296451-36296222 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 444-687 |
| Cow position: | chr29:8825914-8826148 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 444-688 |
| Cow position: | chr29:27505598-27505841 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 444-689 |
| Cow position: | chr29:43593959-43593714 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 444-690 |
| Cow position: | chr29:36517923-36518161 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 444-698 |
| Cow position: | chr29:16057110-16056855 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 444-698 |
| Cow position: | chr29:37263458-37263206 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 444-699 |
| Cow position: | chr29:6199388-6199130 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 55 |
| Conread position: | 444-706 |
| Cow position: | chr29:26216852-26217110 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 444-718 |
| Cow position: | chr29:36603379-36603643 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 444-720 |
| Cow position: | chr29:20622034-20622302 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 444-760 |
| Cow position: | chr29:22122076-22122384 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 444-783 |
| Cow position: | chr29:9096787-9097124 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 444-791 |
| Cow position: | chr29:22610691-22611020 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 444-791 |
| Cow position: | chr29:39438525-39438859 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 444-792 |
| Cow position: | chr29:19596552-19596206 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 444-792 |
| Cow position: | chr29:42225120-42225472 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 444-795 |
| Cow position: | chr29:20971096-20970744 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 444-796 |
| Cow position: | chr29:37068662-37069000 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 120, 7 |
| Conread position: | 444-800 |
| Cow position: | chr29:9316216-9315859 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 444-802 |
| Cow position: | chr29:22443092-22443436 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 444-802 |
| Cow position: | chr29:23744582-23744238 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 444-802 |
| Cow position: | chr29:25698784-25699141 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 444-802 |
| Cow position: | chr29:36688223-36688605 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 444-802 |
| Cow position: | chr29:42543744-42544097 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 444-803 |
| Cow position: | chr29:5636656-5637023 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 444-820 |
| Cow position: | chr29:40137423-40137050 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 444-826 |
| Cow position: | chr29:32953983-32954338 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 444-833 |
| Cow position: | chr29:18980072-18979688 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 444-841 |
| Cow position: | chr29:19635762-19635350 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 444-841 |
| Cow position: | chr29:43551654-43551258 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 444-859 |
| Cow position: | chr29:5178227-5177797 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 445-607 |
| Cow position: | chr29:25059075-25059237 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 445-715 |
| Cow position: | chr29:40988938-40988663 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 445-796 |
| Cow position: | chr29:31636646-31637007 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 446-720 |
| Cow position: | chr29:26968662-26968929 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 446-799 |
| Cow position: | chr29:34332485-34332126 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 448-610 |
| Cow position: | chr29:113377-113215 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 448-692 |
| Cow position: | chr29:16939706-16939941 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 448-751 |
| Cow position: | chr29:36007569-36007871 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 448-800 |
| Cow position: | chr29:33123478-33123819 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 448-802 |
| Cow position: | chr29:40703975-40703629 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 448-809 |
| Cow position: | chr29:41809137-41809504 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 448-816 |
| Cow position: | chr29:16364887-16365261 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 451-773 |
| Cow position: | chr29:37557627-37557938 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 451-790 |
| Cow position: | chr29:19547186-19546845 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 242, 33 |
| Conread position: | 451-803 |
| Cow position: | chr29:21520464-21520098 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 170, 33 |
| Conread position: | 452-659 |
| Cow position: | chr29:13064145-13064351 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 452-682 |
| Cow position: | chr29:44598119-44597891 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 452-689 |
| Cow position: | chr29:20642424-20642654 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 452-690 |
| Cow position: | chr29:38476985-38477210 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 452-706 |
| Cow position: | chr29:23541558-23541303 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 452-792 |
| Cow position: | chr29:38858934-38859273 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 37 |
| Conread position: | 452-797 |
| Cow position: | chr29:12968105-12967758 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 452-800 |
| Cow position: | chr29:36323981-36324316 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 452-803 |
| Cow position: | chr29:9511270-9510912 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 452-823 |
| Cow position: | chr29:12292574-12292184 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 453-841 |
| Cow position: | chr29:25771687-25771288 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 454-619 |
| Cow position: | chr29:34378990-34378827 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 454-622 |
| Cow position: | chr29:36402084-36402249 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 454-659 |
| Cow position: | chr29:40920500-40920302 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 454-690 |
| Cow position: | chr29:29000996-29000766 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 454-835 |
| Cow position: | chr29:13046193-13046568 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 455-665 |
| Cow position: | chr29:18400334-18400540 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 455-688 |
| Cow position: | chr29:9462996-9462770 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 455-691 |
| Cow position: | chr29:31906211-31906444 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 455-733 |
| Cow position: | chr29:12015381-12015656 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 455-796 |
| Cow position: | chr29:6803466-6803122 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 455-802 |
| Cow position: | chr29:33128507-33128856 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 456-660 |
| Cow position: | chr29:30369304-30369104 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 456-670 |
| Cow position: | chr29:42537564-42537777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 456-706 |
| Cow position: | chr29:324047-323795 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 456-781 |
| Cow position: | chr29:41148831-41148510 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 232, 25 |
| Conread position: | 456-789 |
| Cow position: | chr29:5029387-5029728 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 456-798 |
| Cow position: | chr29:39281158-39281494 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 272, 29 |
| Conread position: | 457-736 |
| Cow position: | chr29:23052739-23052464 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 27 |
| Conread position: | 457-795 |
| Cow position: | chr29:2564411-2564736 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 457-802 |
| Cow position: | chr29:39443904-39443567 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 458-802 |
| Cow position: | chr29:19564805-19564453 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 459-669 |
| Cow position: | chr29:20085871-20085660 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 459-752 |
| Cow position: | chr29:37675515-37675222 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 459-774 |
| Cow position: | chr29:13022158-13022477 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 460-686 |
| Cow position: | chr29:30516063-30515838 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 460-706 |
| Cow position: | chr29:31377105-31377349 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 460-758 |
| Cow position: | chr29:41741393-41741671 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 460-800 |
| Cow position: | chr29:19664457-19664788 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 301, 22 |
| Conread position: | 461-671 |
| Cow position: | chr29:33101974-33102188 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 462-841 |
| Cow position: | chr29:12943440-12943834 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 465-795 |
| Cow position: | chr29:34337948-34337609 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 468-847 |
| Cow position: | chr29:5388203-5387816 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 471-802 |
| Cow position: | chr29:36727596-36727937 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 480-795 |
| Cow position: | chr29:31156460-31156137 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 481-690 |
| Cow position: | chr29:2491368-2491158 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 481-690 |
| Cow position: | chr29:2493944-2494154 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 481-802 |
| Cow position: | chr29:1600052-1599722 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 481-802 |
| Cow position: | chr29:34427214-34426887 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 482-660 |
| Cow position: | chr29:39656442-39656261 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 482-689 |
| Cow position: | chr29:23592979-23592779 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 484-674 |
| Cow position: | chr29:21591522-21591331 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 484-797 |
| Cow position: | chr29:1004808-1005139 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 484-802 |
| Cow position: | chr29:31345795-31345470 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 486-633 |
| Cow position: | chr29:25348547-25348692 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 486-792 |
| Cow position: | chr29:31836161-31836477 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 486-795 |
| Cow position: | chr29:42942602-42942909 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 486-867 |
| Cow position: | chr29:39576830-39576446 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 490-700 |
| Cow position: | chr29:29900412-29900199 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 490-827 |
| Cow position: | chr29:4760438-4760773 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 491-696 |
| Cow position: | chr29:19616513-19616304 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 491-797 |
| Cow position: | chr29:13095463-13095771 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 140, 162 |
| Conread position: | 491-802 |
| Cow position: | chr29:20922902-20922596 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 161, 58 |
| Conread position: | 492-675 |
| Cow position: | chr29:33091723-33091904 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 492-691 |
| Cow position: | chr29:33584519-33584320 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 493-770 |
| Cow position: | chr29:43071262-43070987 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 493-802 |
| Cow position: | chr29:29622476-29622780 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 218, 28 |
| Conread position: | 493-803 |
| Cow position: | chr29:34450307-34449990 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 493-820 |
| Cow position: | chr29:27687637-27687961 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 495-686 |
| Cow position: | chr29:40464807-40464998 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 495-802 |
| Cow position: | chr29:30492909-30493201 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 495-842 |
| Cow position: | chr29:45466704-45467057 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 496-661 |
| Cow position: | chr29:20615674-20615842 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 498-687 |
| Cow position: | chr29:36735366-36735555 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 500-794 |
| Cow position: | chr29:18115355-18115662 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 48, 206 |
| Conread position: | 505-690 |
| Cow position: | chr29:18276550-18276374 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 505-792 |
| Cow position: | chr29:31960262-31960559 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 505-802 |
| Cow position: | chr29:42847381-42847676 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 513-687 |
| Cow position: | chr29:25455008-25454834 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 514-787 |
| Cow position: | chr29:7341520-7341810 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 515-757 |
| Cow position: | chr29:42014424-42014666 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 515-758 |
| Cow position: | chr29:42475240-42475485 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 515-762 |
| Cow position: | chr29:28190271-28190028 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 515-803 |
| Cow position: | chr29:34283861-34283558 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 516-795 |
| Cow position: | chr29:33549228-33548941 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 517-795 |
| Cow position: | chr29:43037722-43037432 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 518-713 |
| Cow position: | chr29:39552471-39552265 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 519-795 |
| Cow position: | chr29:36299691-36299944 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 241, 19 |
| Conread position: | 539-796 |
| Cow position: | chr29:12693405-12693673 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 54 |
| Conread position: | 541-710 |
| Cow position: | chr29:353073-352902 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 543-793 |
| Cow position: | chr29:31362431-31362180 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 544-802 |
| Cow position: | chr29:29298639-29298910 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 547-719 |
| Cow position: | chr29:5921492-5921323 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 142, 17 |
| Conread position: | 548-796 |
| Cow position: | chr29:17038190-17037928 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 143, 32 |
| Conread position: | 561-796 |
| Cow position: | chr29:42367236-42366998 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 201, 135 |
| Conread position: | 572-793 |
| Cow position: | chr29:36993400-36993191 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 72 |
| Conread position: | 585-802 |
| Cow position: | chr29:36340290-36340507 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 178, 64 |
| Conread position: | 591-817 |
| Cow position: | chr29:26134511-26134265 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 235 |
| Conread position: | 594-706 |
| Cow position: | chr29:17337076-17337188 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 606-839 |
| Cow position: | chr29:18215265-18215503 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 152, 86 |
Show alignments to all cow chromosomes.