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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8043L16.5.5
        

               
Conread position:
               
357-809
               

               
Cow position:
               
chr4:22075101-22075538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
414-802
               

               
Cow position:
               
chr4:45766323-45765950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
414-833
               

               
Cow position:
               
chr4:26430831-26431274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
418-704
               

               
Cow position:
               
chr4:66199560-66199851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
421-802
               

               
Cow position:
               
chr4:14187242-14187638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
422-702
               

               
Cow position:
               
chr4:20562284-20562571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
422-719
               

               
Cow position:
               
chr4:20290389-20290088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
426-650
               

               
Cow position:
               
chr4:51275351-51275136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
431-660
               

               
Cow position:
               
chr4:52960085-52959862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
435-800
               

               
Cow position:
               
chr4:26923157-26922788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
441-802
               

               
Cow position:
               
chr4:38933118-38933478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
443-762
               

               
Cow position:
               
chr4:44407265-44407581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
444-596
               

               
Cow position:
               
chr4:48417911-48417764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
444-605
               

               
Cow position:
               
chr4:23892437-23892595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-614
               

               
Cow position:
               
chr4:29132885-29133055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
444-660
               

               
Cow position:
               
chr4:19203386-19203587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
444-660
               

               
Cow position:
               
chr4:42954725-42954938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
444-671
               

               
Cow position:
               
chr4:11319324-11319547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
444-687
               

               
Cow position:
               
chr4:56177505-56177749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
444-689
               

               
Cow position:
               
chr4:68940421-68940177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
444-708
               

               
Cow position:
               
chr4:21140443-21140695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
444-710
               

               
Cow position:
               
chr4:41897025-41896761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
444-711
               

               
Cow position:
               
chr4:20192984-20193230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 35
               

               
Conread position:
               
444-718
               

               
Cow position:
               
chr4:50874662-50874388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
444-733
               

               
Cow position:
               
chr4:51369882-51369580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
444-749
               

               
Cow position:
               
chr4:4285613-4285903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
444-756
               

               
Cow position:
               
chr4:8120475-8120163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
444-757
               

               
Cow position:
               
chr4:43381869-43382171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
444-787
               

               
Cow position:
               
chr4:12424161-12423824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 8
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr4:11225787-11225435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr4:49852144-49851802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr4:8567660-8567311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr4:33196501-33196151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr4:34117126-34116783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr4:39935356-39935697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-796
               

               
Cow position:
               
chr4:16827873-16827540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr4:20581342-20580970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr4:27723666-27723317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr4:39914584-39914954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr4:45994345-45994699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr4:46359562-46359916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
444-801
               

               
Cow position:
               
chr4:23823719-23823367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:993394-993052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:12844883-12845230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:36071071-36071434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:39227758-39228115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:56172144-56172509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:66183921-66183550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr4:69508510-69508872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
444-822
               

               
Cow position:
               
chr4:49376947-49376561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
444-833
               

               
Cow position:
               
chr4:49913694-49913312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
444-841
               

               
Cow position:
               
chr4:18185585-18185988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
444-858
               

               
Cow position:
               
chr4:66460331-66459928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-859
               

               
Cow position:
               
chr4:27167015-27167434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
444-864
               

               
Cow position:
               
chr4:66412780-66412354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
444-871
               

               
Cow position:
               
chr4:34027995-34028419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
445-661
               

               
Cow position:
               
chr4:50824297-50824504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
445-669
               

               
Cow position:
               
chr4:44039221-44039442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
445-792
               

               
Cow position:
               
chr4:23882710-23882356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
445-795
               

               
Cow position:
               
chr4:67734331-67734675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
446-624
               

               
Cow position:
               
chr4:51287752-51287926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
446-629
               

               
Cow position:
               
chr4:24661846-24661670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
446-689
               

               
Cow position:
               
chr4:11150084-11150322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
446-703
               

               
Cow position:
               
chr4:2212046-2211789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
446-704
               

               
Cow position:
               
chr4:51425561-51425824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
446-708
               

               
Cow position:
               
chr4:67106944-67107203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
447-690
               

               
Cow position:
               
chr4:60009011-60008764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
447-698
               

               
Cow position:
               
chr4:46017249-46017002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
448-680
               

               
Cow position:
               
chr4:43549205-43548976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
448-681
               

               
Cow position:
               
chr4:33929296-33929528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
448-690
               

               
Cow position:
               
chr4:20911244-20911491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
448-696
               

               
Cow position:
               
chr4:38845294-38845540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
448-705
               

               
Cow position:
               
chr4:49698288-49698550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
6, 222
               

               
Conread position:
               
448-755
               

               
Cow position:
               
chr4:43807901-43807597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
448-771
               

               
Cow position:
               
chr4:59837817-59838140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr4:11227964-11228330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr4:22523255-22523602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr4:28778239-28778591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr4:53665384-53665739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
448-805
               

               
Cow position:
               
chr4:42928443-42928798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
448-806
               

               
Cow position:
               
chr4:14384026-14383680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
448-821
               

               
Cow position:
               
chr4:37040207-37040579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
448-832
               

               
Cow position:
               
chr4:32693431-32693062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
448-834
               

               
Cow position:
               
chr4:42907422-42907824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
6, 104
               

               
Conread position:
               
448-835
               

               
Cow position:
               
chr4:47488551-47488917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
448-839
               

               
Cow position:
               
chr4:2649602-2649997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
448-857
               

               
Cow position:
               
chr4:32440842-32441235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
449-691
               

               
Cow position:
               
chr4:34724718-34724957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
449-785
               

               
Cow position:
               
chr4:5238669-5239006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
449-798
               

               
Cow position:
               
chr4:54445872-54445528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
449-801
               

               
Cow position:
               
chr4:37947193-37946835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
451-671
               

               
Cow position:
               
chr4:53558704-53558921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
451-760
               

               
Cow position:
               
chr4:35121389-35121089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
451-790
               

               
Cow position:
               
chr4:47978669-47978998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
451-802
               

               
Cow position:
               
chr4:39406546-39406190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
452-594
               

               
Cow position:
               
chr4:42871589-42871727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
452-600
               

               
Cow position:
               
chr4:26704473-26704326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
452-629
               

               
Cow position:
               
chr4:23048496-23048323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
452-660
               

               
Cow position:
               
chr4:39510657-39510459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
452-684
               

               
Cow position:
               
chr4:52054138-52054352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
452-686
               

               
Cow position:
               
chr4:29186606-29186378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
452-687
               

               
Cow position:
               
chr4:40769807-40769576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
452-687
               

               
Cow position:
               
chr4:42434996-42434770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
452-689
               

               
Cow position:
               
chr4:30997656-30997892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
452-690
               

               
Cow position:
               
chr4:34475536-34475304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
452-690
               

               
Cow position:
               
chr4:63972526-63972763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
452-697
               

               
Cow position:
               
chr4:32001472-32001709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
452-706
               

               
Cow position:
               
chr4:10996443-10996192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
452-706
               

               
Cow position:
               
chr4:49929739-49929505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
452-708
               

               
Cow position:
               
chr4:53273733-53273485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
452-711
               

               
Cow position:
               
chr4:31345598-31345851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
236, 30
               

               
Conread position:
               
452-715
               

               
Cow position:
               
chr4:14402600-14402339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
452-736
               

               
Cow position:
               
chr4:57012307-57012032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
452-761
               

               
Cow position:
               
chr4:21503330-21503028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
241, 31
               

               
Conread position:
               
452-776
               

               
Cow position:
               
chr4:60723298-60723616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
452-795
               

               
Cow position:
               
chr4:10490994-10490644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
452-797
               

               
Cow position:
               
chr4:8030045-8029687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
452-798
               

               
Cow position:
               
chr4:47137368-47137709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
452-799
               

               
Cow position:
               
chr4:64016460-64016113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
452-802
               

               
Cow position:
               
chr4:23769920-23770266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
452-802
               

               
Cow position:
               
chr4:57557394-57557769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
452-858
               

               
Cow position:
               
chr4:34074213-34073785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
452-858
               

               
Cow position:
               
chr4:44062206-44061789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
453-632
               

               
Cow position:
               
chr4:7058185-7058010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
453-800
               

               
Cow position:
               
chr4:55794768-55795117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
453-841
               

               
Cow position:
               
chr4:23888547-23888148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
454-655
               

               
Cow position:
               
chr4:52970042-52969842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
454-714
               

               
Cow position:
               
chr4:13207920-13208178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
454-819
               

               
Cow position:
               
chr4:31014388-31014031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
455-623
               

               
Cow position:
               
chr4:35316074-35315909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
455-629
               

               
Cow position:
               
chr4:64986405-64986575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
455-658
               

               
Cow position:
               
chr4:34347337-34347135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
455-671
               

               
Cow position:
               
chr4:60952478-60952263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
455-683
               

               
Cow position:
               
chr4:51515072-51514849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
455-688
               

               
Cow position:
               
chr4:22646455-22646224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
455-689
               

               
Cow position:
               
chr4:22631879-22631659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
229, 26
               

               
Conread position:
               
455-698
               

               
Cow position:
               
chr4:27543120-27542879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
455-742
               

               
Cow position:
               
chr4:43233596-43233309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
455-796
               

               
Cow position:
               
chr4:61174191-61174530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
456-579
               

               
Cow position:
               
chr4:19204125-19204004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
456-691
               

               
Cow position:
               
chr4:43456601-43456836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
456-720
               

               
Cow position:
               
chr4:51484841-51484586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 32
               

               
Conread position:
               
456-802
               

               
Cow position:
               
chr4:22877740-22877392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
456-802
               

               
Cow position:
               
chr4:49004251-49004588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
456-828
               

               
Cow position:
               
chr4:47886150-47886528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
456-909
               

               
Cow position:
               
chr4:68941747-68941297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
457-661
               

               
Cow position:
               
chr4:13313302-13313100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
457-802
               

               
Cow position:
               
chr4:3972187-3972529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
457-828
               

               
Cow position:
               
chr4:43293666-43293292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
458-647
               

               
Cow position:
               
chr4:21157108-21156923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
458-690
               

               
Cow position:
               
chr4:56874861-56875090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
458-761
               

               
Cow position:
               
chr4:5198850-5198550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
459-683
               

               
Cow position:
               
chr4:64071495-64071276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
459-690
               

               
Cow position:
               
chr4:40436396-40436165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
459-692
               

               
Cow position:
               
chr4:57513113-57513341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
460-652
               

               
Cow position:
               
chr4:29727361-29727173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
460-696
               

               
Cow position:
               
chr4:54597010-54597247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
460-767
               

               
Cow position:
               
chr4:38068286-38067998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
462-693
               

               
Cow position:
               
chr4:1760503-1760273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
462-802
               

               
Cow position:
               
chr4:1736999-1737322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
463-787
               

               
Cow position:
               
chr4:37041329-37041010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
463-803
               

               
Cow position:
               
chr4:23866253-23865905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
463-805
               

               
Cow position:
               
chr4:18760699-18761049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
464-802
               

               
Cow position:
               
chr4:47798969-47799304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
466-797
               

               
Cow position:
               
chr4:49032318-49032666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
467-726
               

               
Cow position:
               
chr4:52713345-52713603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
473-711
               

               
Cow position:
               
chr4:9389644-9389403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
474-802
               

               
Cow position:
               
chr4:32301505-32301828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
475-697
               

               
Cow position:
               
chr4:49682868-49682642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
476-798
               

               
Cow position:
               
chr4:3720419-3720087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
476-802
               

               
Cow position:
               
chr4:37055033-37054700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
479-626
               

               
Cow position:
               
chr4:11376914-11377063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
479-633
               

               
Cow position:
               
chr4:30254806-30254642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
483-715
               

               
Cow position:
               
chr4:33832988-33832758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
484-789
               

               
Cow position:
               
chr4:20614961-20614640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
484-800
               

               
Cow position:
               
chr4:34054448-34054154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
291, 37
               

               
Conread position:
               
484-802
               

               
Cow position:
               
chr4:52717443-52717111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
485-839
               

               
Cow position:
               
chr4:56816896-56817268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
486-682
               

               
Cow position:
               
chr4:6628188-6628387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
486-726
               

               
Cow position:
               
chr4:36033958-36034204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
486-797
               

               
Cow position:
               
chr4:36663511-36663202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
486-802
               

               
Cow position:
               
chr4:33663352-33663669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
486-835
               

               
Cow position:
               
chr4:58161205-58160855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
486-837
               

               
Cow position:
               
chr4:27608705-27609077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
487-844
               

               
Cow position:
               
chr4:10042330-10042691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
488-697
               

               
Cow position:
               
chr4:54828518-54828311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
489-792
               

               
Cow position:
               
chr4:25572034-25572346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
489-792
               

               
Cow position:
               
chr4:54151592-54151289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
489-796
               

               
Cow position:
               
chr4:57430235-57429929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
489-800
               

               
Cow position:
               
chr4:37495085-37494766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
489-823
               

               
Cow position:
               
chr4:22391615-22391282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
490-653
               

               
Cow position:
               
chr4:1774672-1774512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
490-703
               

               
Cow position:
               
chr4:7157487-7157704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
490-802
               

               
Cow position:
               
chr4:22696680-22696369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
491-668
               

               
Cow position:
               
chr4:55555482-55555658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
491-806
               

               
Cow position:
               
chr4:37080758-37080457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
273, 54
               

               
Conread position:
               
492-683
               

               
Cow position:
               
chr4:23813919-23814112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 141
               

               
Conread position:
               
492-788
               

               
Cow position:
               
chr4:43070467-43070757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
267, 48
               

               
Conread position:
               
492-790
               

               
Cow position:
               
chr4:41168317-41168622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 229
               

               
Conread position:
               
492-802
               

               
Cow position:
               
chr4:13652447-13652750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
492-815
               

               
Cow position:
               
chr4:22883678-22883362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
493-780
               

               
Cow position:
               
chr4:56670426-56670728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
493-802
               

               
Cow position:
               
chr4:40051751-40052055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
494-757
               

               
Cow position:
               
chr4:38831448-38831713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
495-727
               

               
Cow position:
               
chr4:46428180-46428417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
495-797
               

               
Cow position:
               
chr4:25956172-25956470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
495-858
               

               
Cow position:
               
chr4:10092414-10092050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
496-800
               

               
Cow position:
               
chr4:57475594-57475901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 199
               

               
Conread position:
               
496-805
               

               
Cow position:
               
chr4:26199277-26198957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 229
               

               
Conread position:
               
498-688
               

               
Cow position:
               
chr4:1389324-1389515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
498-797
               

               
Cow position:
               
chr4:22360318-22360017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
498-834
               

               
Cow position:
               
chr4:49219537-49219181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
499-796
               

               
Cow position:
               
chr4:1984795-1985100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
500-710
               

               
Cow position:
               
chr4:66308895-66309110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
503-671
               

               
Cow position:
               
chr4:27554712-27554882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
503-759
               

               
Cow position:
               
chr4:39961864-39961606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 221
               

               
Conread position:
               
503-772
               

               
Cow position:
               
chr4:22493570-22493839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
503-795
               

               
Cow position:
               
chr4:22601085-22600782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
504-690
               

               
Cow position:
               
chr4:65417873-65417690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
504-698
               

               
Cow position:
               
chr4:34617809-34617614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
505-711
               

               
Cow position:
               
chr4:34396338-34396537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
505-761
               

               
Cow position:
               
chr4:56812321-56812071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
506-758
               

               
Cow position:
               
chr4:63851985-63851732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
508-802
               

               
Cow position:
               
chr4:22833240-22832939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
512-693
               

               
Cow position:
               
chr4:3079830-3080008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
512-802
               

               
Cow position:
               
chr4:53492705-53493007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 222
               

               
Conread position:
               
513-714
               

               
Cow position:
               
chr4:67521843-67521641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
513-782
               

               
Cow position:
               
chr4:56580053-56580330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
513-798
               

               
Cow position:
               
chr4:5911964-5911678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
515-801
               

               
Cow position:
               
chr4:40403937-40403642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
515-863
               

               
Cow position:
               
chr4:8994983-8995343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
516-796
               

               
Cow position:
               
chr4:41599450-41599744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
31, 218
               

               
Conread position:
               
516-835
               

               
Cow position:
               
chr4:9611439-9611120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
521-687
               

               
Cow position:
               
chr4:50676832-50676664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
524-802
               

               
Cow position:
               
chr4:26703650-26703359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
525-802
               

               
Cow position:
               
chr4:22853510-22853776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
526-692
               

               
Cow position:
               
chr4:871384-871549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
539-802
               

               
Cow position:
               
chr4:11994330-11994586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
214, 28
               

               
Conread position:
               
540-795
               

               
Cow position:
               
chr4:61990795-61990541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
156, 127
               

               
Conread position:
               
543-689
               

               
Cow position:
               
chr4:19833193-19833338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
543-712
               

               
Cow position:
               
chr4:44332378-44332208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
543-827
               

               
Cow position:
               
chr4:50799116-50799408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 117
               

               
Conread position:
               
544-799
               

               
Cow position:
               
chr4:38315566-38315310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
220, 193
               

               
Conread position:
               
544-841
               

               
Cow position:
               
chr4:20245424-20245749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
545-762
               

               
Cow position:
               
chr4:12136653-12136864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
545-802
               

               
Cow position:
               
chr4:23953858-23953595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
546-796
               

               
Cow position:
               
chr4:5049377-5049633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
200, 62
               

               
Conread position:
               
547-761
               

               
Cow position:
               
chr4:44339591-44339803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
167, 145
               

               
Conread position:
               
548-832
               

               
Cow position:
               
chr4:49916428-49916726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 205
               

               
Conread position:
               
548-859
               

               
Cow position:
               
chr4:2587419-2587738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
139, 253
               

               
Conread position:
               
552-792
               

               
Cow position:
               
chr4:59890006-59889758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
552-837
               

               
Cow position:
               
chr4:27433594-27433886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 108
               

               
Conread position:
               
554-802
               

               
Cow position:
               
chr4:41210113-41209852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 193
               

               
Conread position:
               
555-802
               

               
Cow position:
               
chr4:46054726-46054470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
568-797
               

               
Cow position:
               
chr4:50988551-50988790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
576-833
               

               
Cow position:
               
chr4:54511682-54511427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
585-838
               

               
Cow position:
               
chr4:57160072-57160318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
610-802
               

               
Cow position:
               
chr4:2166004-2165803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
644-796
               

               
Cow position:
               
chr4:56908287-56908442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 48
               
Show alignments to all cow chromosomes.