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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8043L16.5.5
        

               
Conread position:
               
396-715
               

               
Cow position:
               
chr7:46964992-46965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
413-633
               

               
Cow position:
               
chr7:16855742-16855956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
426-592
               

               
Cow position:
               
chr7:5667860-5668025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
427-802
               

               
Cow position:
               
chr7:15809334-15809720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
429-685
               

               
Cow position:
               
chr7:8601948-8602200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
430-802
               

               
Cow position:
               
chr7:38487217-38487580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
442-620
               

               
Cow position:
               
chr7:11175517-11175344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
443-799
               

               
Cow position:
               
chr7:31638508-31638873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
443-802
               

               
Cow position:
               
chr7:15640176-15640540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
444-570
               

               
Cow position:
               
chr7:7745581-7745708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
444-577
               

               
Cow position:
               
chr7:41789914-41789776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
444-585
               

               
Cow position:
               
chr7:1594976-1594836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
444-591
               

               
Cow position:
               
chr7:28570196-28570344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
444-604
               

               
Cow position:
               
chr7:39925571-39925727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
444-620
               

               
Cow position:
               
chr7:26375567-26375732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
444-641
               

               
Cow position:
               
chr7:11362425-11362226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
444-647
               

               
Cow position:
               
chr7:6249066-6248863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
444-649
               

               
Cow position:
               
chr7:15381070-15381278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
444-653
               

               
Cow position:
               
chr7:6181975-6181757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 199
               

               
Conread position:
               
444-653
               

               
Cow position:
               
chr7:9856816-9856607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-658
               

               
Cow position:
               
chr7:9810198-9809984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-658
               

               
Cow position:
               
chr7:31441200-31441415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
444-668
               

               
Cow position:
               
chr7:30601759-30601977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr7:67792046-67791813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
444-683
               

               
Cow position:
               
chr7:61435019-61435261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 192
               

               
Conread position:
               
444-684
               

               
Cow position:
               
chr7:3510848-3511080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
444-684
               

               
Cow position:
               
chr7:56983671-56983430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
444-686
               

               
Cow position:
               
chr7:20944919-20945162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
444-687
               

               
Cow position:
               
chr7:17009355-17009122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
444-687
               

               
Cow position:
               
chr7:46163400-46163644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
444-689
               

               
Cow position:
               
chr7:36260173-36260422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
444-690
               

               
Cow position:
               
chr7:9138013-9138253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
444-690
               

               
Cow position:
               
chr7:26304186-26303949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
444-693
               

               
Cow position:
               
chr7:23897935-23897684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
444-702
               

               
Cow position:
               
chr7:27237095-27237345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
444-706
               

               
Cow position:
               
chr7:49111158-49110894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
444-711
               

               
Cow position:
               
chr7:5918607-5918870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
444-711
               

               
Cow position:
               
chr7:52512828-52512565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
444-722
               

               
Cow position:
               
chr7:4945516-4945787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
444-727
               

               
Cow position:
               
chr7:46070326-46070605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
444-733
               

               
Cow position:
               
chr7:32455604-32455886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
444-747
               

               
Cow position:
               
chr7:48127230-48127522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
444-754
               

               
Cow position:
               
chr7:51648674-51648980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
444-756
               

               
Cow position:
               
chr7:11024333-11024033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
444-757
               

               
Cow position:
               
chr7:17671269-17670962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
444-758
               

               
Cow position:
               
chr7:1767535-1767220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
444-758
               

               
Cow position:
               
chr7:2097572-2097266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
444-761
               

               
Cow position:
               
chr7:2628531-2628223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
444-762
               

               
Cow position:
               
chr7:4957240-4957553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 133
               

               
Conread position:
               
444-762
               

               
Cow position:
               
chr7:17001711-17001408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
444-762
               

               
Cow position:
               
chr7:29404934-29404614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
444-778
               

               
Cow position:
               
chr7:37159201-37158872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
444-787
               

               
Cow position:
               
chr7:4390535-4390197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
444-791
               

               
Cow position:
               
chr7:21249329-21249677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
444-791
               

               
Cow position:
               
chr7:45222118-45221782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr7:9747906-9747548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr7:17834338-17834683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr7:26497094-26496759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
444-794
               

               
Cow position:
               
chr7:9546040-9545698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr7:1786319-1785969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr7:8022950-8023319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr7:17796747-17796396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
444-795
               

               
Cow position:
               
chr7:42161758-42162111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
444-796
               

               
Cow position:
               
chr7:13846087-13846437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
444-796
               

               
Cow position:
               
chr7:15961614-15961967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
444-796
               

               
Cow position:
               
chr7:51942374-51942710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
444-796
               

               
Cow position:
               
chr7:65155965-65155612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr7:13456991-13456641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
444-800
               

               
Cow position:
               
chr7:17329626-17329975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:2086276-2085928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:2427766-2428128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:2659730-2659369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:4812394-4812757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:5506968-5506612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:8551916-8552271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:9107938-9108303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:12506964-12507323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:17392337-17391975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:21564808-21565153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:28476423-28476781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:28959958-28960316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:37526429-37526072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:44723368-44723014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:45386061-45386427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:48005663-48006034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
444-802
               

               
Cow position:
               
chr7:51473087-51472722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 171
               

               
Conread position:
               
444-806
               

               
Cow position:
               
chr7:34892987-34892631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-810
               

               
Cow position:
               
chr7:63783111-63782746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
444-812
               

               
Cow position:
               
chr7:4894211-4893837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
444-835
               

               
Cow position:
               
chr7:48324068-48323704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
444-841
               

               
Cow position:
               
chr7:10006309-10005916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
444-842
               

               
Cow position:
               
chr7:6421913-6421513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
444-843
               

               
Cow position:
               
chr7:36848349-36847946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
444-859
               

               
Cow position:
               
chr7:6025301-6024886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
444-883
               

               
Cow position:
               
chr7:21782078-21781645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
445-683
               

               
Cow position:
               
chr7:34832996-34833240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
445-694
               

               
Cow position:
               
chr7:29743425-29743176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
445-694
               

               
Cow position:
               
chr7:42320111-42319865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
445-708
               

               
Cow position:
               
chr7:5737056-5736794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
445-788
               

               
Cow position:
               
chr7:34141545-34141889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
445-796
               

               
Cow position:
               
chr7:26569623-26569959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
445-841
               

               
Cow position:
               
chr7:665998-666427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 199
               

               
Conread position:
               
446-675
               

               
Cow position:
               
chr7:22966314-22966085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
446-691
               

               
Cow position:
               
chr7:2740605-2740364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
446-753
               

               
Cow position:
               
chr7:4015630-4015936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
446-795
               

               
Cow position:
               
chr7:7890398-7890045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
446-802
               

               
Cow position:
               
chr7:40614976-40615327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
446-819
               

               
Cow position:
               
chr7:28947167-28946807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
446-823
               

               
Cow position:
               
chr7:15822882-15822512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
447-715
               

               
Cow position:
               
chr7:26543440-26543694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
448-655
               

               
Cow position:
               
chr7:43637249-43637456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
448-657
               

               
Cow position:
               
chr7:6978943-6978741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
448-658
               

               
Cow position:
               
chr7:19402627-19402422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
448-659
               

               
Cow position:
               
chr7:30044155-30044364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
448-686
               

               
Cow position:
               
chr7:26733343-26733103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
448-701
               

               
Cow position:
               
chr7:51939592-51939843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
448-706
               

               
Cow position:
               
chr7:22910748-22911006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
448-715
               

               
Cow position:
               
chr7:5116258-5116525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
448-754
               

               
Cow position:
               
chr7:28536902-28537209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
448-760
               

               
Cow position:
               
chr7:43367360-43367050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
448-762
               

               
Cow position:
               
chr7:2087873-2088172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
448-795
               

               
Cow position:
               
chr7:68578930-68579278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
448-796
               

               
Cow position:
               
chr7:22655360-22655009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
448-797
               

               
Cow position:
               
chr7:21847495-21847139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
448-800
               

               
Cow position:
               
chr7:10640278-10640618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
448-800
               

               
Cow position:
               
chr7:14088889-14088543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:1182734-1183090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:4068924-4069273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:6807013-6807383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:7790754-7791108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:26731650-26731304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
448-802
               

               
Cow position:
               
chr7:51853148-51853510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr7:21010363-21009989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
448-835
               

               
Cow position:
               
chr7:48725764-48725388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
448-842
               

               
Cow position:
               
chr7:23482204-23481808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
448-842
               

               
Cow position:
               
chr7:28596146-28596547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
450-603
               

               
Cow position:
               
chr7:13103357-13103205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
450-662
               

               
Cow position:
               
chr7:4009768-4009981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
451-784
               

               
Cow position:
               
chr7:21713127-21712793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
451-791
               

               
Cow position:
               
chr7:26493424-26493089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
451-802
               

               
Cow position:
               
chr7:14903497-14903145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
451-846
               

               
Cow position:
               
chr7:24278487-24278087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
451-847
               

               
Cow position:
               
chr7:26057578-26057182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
452-667
               

               
Cow position:
               
chr7:17102137-17102343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
452-689
               

               
Cow position:
               
chr7:12213799-12213563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
452-690
               

               
Cow position:
               
chr7:51523627-51523871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
452-691
               

               
Cow position:
               
chr7:1539046-1539287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
452-692
               

               
Cow position:
               
chr7:49102827-49102594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
452-696
               

               
Cow position:
               
chr7:16004293-16004048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
452-705
               

               
Cow position:
               
chr7:6992077-6991827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
452-714
               

               
Cow position:
               
chr7:18497459-18497202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
452-748
               

               
Cow position:
               
chr7:22180568-22180270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
452-760
               

               
Cow position:
               
chr7:53996781-53997076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
452-792
               

               
Cow position:
               
chr7:6709629-6709296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
452-795
               

               
Cow position:
               
chr7:5188715-5188370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
452-795
               

               
Cow position:
               
chr7:13114208-13114543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
452-797
               

               
Cow position:
               
chr7:30715527-30715181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
452-802
               

               
Cow position:
               
chr7:7549008-7549371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
452-802
               

               
Cow position:
               
chr7:20889030-20889378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
452-802
               

               
Cow position:
               
chr7:57343520-57343165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
452-841
               

               
Cow position:
               
chr7:14891747-14892146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
452-841
               

               
Cow position:
               
chr7:51413844-51414245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
453-678
               

               
Cow position:
               
chr7:7485254-7485030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
453-703
               

               
Cow position:
               
chr7:51870276-51870519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
453-762
               

               
Cow position:
               
chr7:2259225-2258939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
453-835
               

               
Cow position:
               
chr7:60178199-60177827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
453-840
               

               
Cow position:
               
chr7:60187834-60188213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
454-684
               

               
Cow position:
               
chr7:36875927-36875698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
454-691
               

               
Cow position:
               
chr7:15656453-15656217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
454-796
               

               
Cow position:
               
chr7:36241986-36242316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 26
               

               
Conread position:
               
454-797
               

               
Cow position:
               
chr7:38609850-38610182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
299, 28
               

               
Conread position:
               
454-813
               

               
Cow position:
               
chr7:1329106-1329466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
455-626
               

               
Cow position:
               
chr7:22664383-22664211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
455-661
               

               
Cow position:
               
chr7:14012431-14012226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
455-664
               

               
Cow position:
               
chr7:44596088-44595882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
455-686
               

               
Cow position:
               
chr7:32738160-32737940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
455-686
               

               
Cow position:
               
chr7:60218315-60218546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
455-689
               

               
Cow position:
               
chr7:29112139-29112362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
455-703
               

               
Cow position:
               
chr7:11478184-11477943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
455-705
               

               
Cow position:
               
chr7:15361702-15361954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
455-713
               

               
Cow position:
               
chr7:46464510-46464255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
455-718
               

               
Cow position:
               
chr7:34587032-34587300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
455-758
               

               
Cow position:
               
chr7:12205714-12206025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
455-790
               

               
Cow position:
               
chr7:23292186-23292531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
455-792
               

               
Cow position:
               
chr7:40184985-40184644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
455-794
               

               
Cow position:
               
chr7:16271954-16272292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
455-795
               

               
Cow position:
               
chr7:13052722-13053063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
455-795
               

               
Cow position:
               
chr7:23827584-23827247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
455-800
               

               
Cow position:
               
chr7:59216410-59216755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
455-802
               

               
Cow position:
               
chr7:2116221-2115889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
455-802
               

               
Cow position:
               
chr7:35749689-35750042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
455-822
               

               
Cow position:
               
chr7:38904603-38904972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
456-620
               

               
Cow position:
               
chr7:32992691-32992528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
456-659
               

               
Cow position:
               
chr7:26733980-26733776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
456-661
               

               
Cow position:
               
chr7:2150835-2150624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
456-686
               

               
Cow position:
               
chr7:14040798-14041028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
456-689
               

               
Cow position:
               
chr7:16280566-16280341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
456-690
               

               
Cow position:
               
chr7:11168339-11168110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
456-703
               

               
Cow position:
               
chr7:23411665-23411422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
456-791
               

               
Cow position:
               
chr7:29749120-29749449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
456-799
               

               
Cow position:
               
chr7:45116437-45116086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
456-800
               

               
Cow position:
               
chr7:11488720-11488384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
456-800
               

               
Cow position:
               
chr7:41845004-41844659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
456-801
               

               
Cow position:
               
chr7:4373478-4373126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
456-841
               

               
Cow position:
               
chr7:59093524-59093938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
456-842
               

               
Cow position:
               
chr7:1778626-1778231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
456-848
               

               
Cow position:
               
chr7:44523244-44522846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
457-675
               

               
Cow position:
               
chr7:26069037-26069252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
457-697
               

               
Cow position:
               
chr7:21226846-21226606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
457-713
               

               
Cow position:
               
chr7:4429950-4430199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
198, 11
               

               
Conread position:
               
457-772
               

               
Cow position:
               
chr7:5190609-5190296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
457-782
               

               
Cow position:
               
chr7:2330153-2330481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
457-795
               

               
Cow position:
               
chr7:63659179-63658841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
457-802
               

               
Cow position:
               
chr7:34247496-34247147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
458-820
               

               
Cow position:
               
chr7:2421730-2422089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
459-628
               

               
Cow position:
               
chr7:9145032-9144865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
459-643
               

               
Cow position:
               
chr7:29845245-29845428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
459-685
               

               
Cow position:
               
chr7:35066634-35066416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
459-689
               

               
Cow position:
               
chr7:9529261-9529484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
459-690
               

               
Cow position:
               
chr7:7617032-7617258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
459-696
               

               
Cow position:
               
chr7:3810016-3810252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
459-714
               

               
Cow position:
               
chr7:66518807-66518551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
459-766
               

               
Cow position:
               
chr7:31541861-31542167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
459-796
               

               
Cow position:
               
chr7:2163931-2163600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
459-796
               

               
Cow position:
               
chr7:65262741-65262402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
459-802
               

               
Cow position:
               
chr7:11729630-11729977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
460-653
               

               
Cow position:
               
chr7:35744225-35744037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
460-711
               

               
Cow position:
               
chr7:29068582-29068335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
460-757
               

               
Cow position:
               
chr7:15819223-15819521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
460-792
               

               
Cow position:
               
chr7:1215850-1216184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
460-792
               

               
Cow position:
               
chr7:17983571-17983895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
460-800
               

               
Cow position:
               
chr7:20806894-20807241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
460-802
               

               
Cow position:
               
chr7:17628402-17628740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
460-802
               

               
Cow position:
               
chr7:18352630-18352966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
460-834
               

               
Cow position:
               
chr7:28421461-28421826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
461-802
               

               
Cow position:
               
chr7:15379011-15378676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
462-703
               

               
Cow position:
               
chr7:13868326-13868565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
462-706
               

               
Cow position:
               
chr7:18160400-18160169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
462-732
               

               
Cow position:
               
chr7:50021147-50020878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
463-667
               

               
Cow position:
               
chr7:26702435-26702638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
464-674
               

               
Cow position:
               
chr7:34720129-34720338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
464-689
               

               
Cow position:
               
chr7:35775452-35775232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
464-795
               

               
Cow position:
               
chr7:3468765-3468435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
466-722
               

               
Cow position:
               
chr7:36831698-36831952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
466-796
               

               
Cow position:
               
chr7:4882266-4882576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
298, 19
               

               
Conread position:
               
466-802
               

               
Cow position:
               
chr7:5578442-5578784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
469-705
               

               
Cow position:
               
chr7:9360480-9360236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
469-800
               

               
Cow position:
               
chr7:18239364-18239029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
470-704
               

               
Cow position:
               
chr7:41328917-41329143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
470-802
               

               
Cow position:
               
chr7:43218874-43218540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
471-802
               

               
Cow position:
               
chr7:7630432-7630095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
479-791
               

               
Cow position:
               
chr7:43014476-43014798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
483-664
               

               
Cow position:
               
chr7:38546606-38546424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
483-796
               

               
Cow position:
               
chr7:42345926-42346230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
484-617
               

               
Cow position:
               
chr7:34213533-34213666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 117
               

               
Conread position:
               
484-802
               

               
Cow position:
               
chr7:29139257-29139573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
485-612
               

               
Cow position:
               
chr7:4140727-4140596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
485-689
               

               
Cow position:
               
chr7:15744778-15744984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
485-770
               

               
Cow position:
               
chr7:5486014-5485736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
225, 55
               

               
Conread position:
               
485-795
               

               
Cow position:
               
chr7:11162518-11162198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 179
               

               
Conread position:
               
485-798
               

               
Cow position:
               
chr7:1780961-1780648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
485-802
               

               
Cow position:
               
chr7:26599621-26599943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 186
               

               
Conread position:
               
486-664
               

               
Cow position:
               
chr7:23303441-23303259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
486-706
               

               
Cow position:
               
chr7:6159186-6159409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
486-719
               

               
Cow position:
               
chr7:5184395-5184164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
486-760
               

               
Cow position:
               
chr7:7012102-7012379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
211, 39
               

               
Conread position:
               
486-767
               

               
Cow position:
               
chr7:6193509-6193791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
486-770
               

               
Cow position:
               
chr7:26378103-26378389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 208
               

               
Conread position:
               
486-799
               

               
Cow position:
               
chr7:57963754-57963432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
486-800
               

               
Cow position:
               
chr7:18893734-18893424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
208, 20
               

               
Conread position:
               
486-802
               

               
Cow position:
               
chr7:6559290-6558982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
486-802
               

               
Cow position:
               
chr7:34949417-34949090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
486-805
               

               
Cow position:
               
chr7:1862340-1862665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
487-753
               

               
Cow position:
               
chr7:18243469-18243209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
487-759
               

               
Cow position:
               
chr7:66015862-66015592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
487-800
               

               
Cow position:
               
chr7:50870359-50870691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
488-657
               

               
Cow position:
               
chr7:14069236-14069066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
488-690
               

               
Cow position:
               
chr7:11762947-11763154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
488-691
               

               
Cow position:
               
chr7:22307521-22307317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
488-718
               

               
Cow position:
               
chr7:26628648-26628422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
488-795
               

               
Cow position:
               
chr7:2999923-3000226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
488-806
               

               
Cow position:
               
chr7:44479308-44478989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
489-646
               

               
Cow position:
               
chr7:37056874-37057031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
489-686
               

               
Cow position:
               
chr7:47127899-47128088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
489-690
               

               
Cow position:
               
chr7:15983326-15983522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
489-706
               

               
Cow position:
               
chr7:45585767-45585550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
489-721
               

               
Cow position:
               
chr7:6103181-6102942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
489-727
               

               
Cow position:
               
chr7:5931907-5931667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 195
               

               
Conread position:
               
489-762
               

               
Cow position:
               
chr7:29132889-29133158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
489-795
               

               
Cow position:
               
chr7:5501855-5502166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
489-795
               

               
Cow position:
               
chr7:8887726-8887406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
489-841
               

               
Cow position:
               
chr7:44538794-44538448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
490-659
               

               
Cow position:
               
chr7:22935109-22934942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
490-690
               

               
Cow position:
               
chr7:29790962-29790757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
490-794
               

               
Cow position:
               
chr7:53640389-53640708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
490-802
               

               
Cow position:
               
chr7:4513529-4513847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
490-802
               

               
Cow position:
               
chr7:5890698-5891011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 114
               

               
Conread position:
               
490-810
               

               
Cow position:
               
chr7:9803873-9803556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
272, 60
               

               
Conread position:
               
491-681
               

               
Cow position:
               
chr7:7778054-7778244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
491-689
               

               
Cow position:
               
chr7:32420448-32420648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
491-691
               

               
Cow position:
               
chr7:59520363-59520566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
491-698
               

               
Cow position:
               
chr7:39397202-39396996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
491-768
               

               
Cow position:
               
chr7:5487779-5487499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
491-776
               

               
Cow position:
               
chr7:2639792-2639506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
491-776
               

               
Cow position:
               
chr7:39888016-39887732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
196, 49
               

               
Conread position:
               
491-793
               

               
Cow position:
               
chr7:43494030-43494337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
491-795
               

               
Cow position:
               
chr7:13934364-13934057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
492-754
               

               
Cow position:
               
chr7:32777186-32777444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
240, 53
               

               
Conread position:
               
492-761
               

               
Cow position:
               
chr7:9370639-9370906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
492-798
               

               
Cow position:
               
chr7:16240085-16240393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
492-802
               

               
Cow position:
               
chr7:6779238-6779554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
492-802
               

               
Cow position:
               
chr7:14495863-14496180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
492-835
               

               
Cow position:
               
chr7:10356233-10355892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
492-840
               

               
Cow position:
               
chr7:20149015-20148661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
493-689
               

               
Cow position:
               
chr7:28325821-28325624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
493-762
               

               
Cow position:
               
chr7:15783417-15783678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
493-790
               

               
Cow position:
               
chr7:6784273-6784578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 202
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr7:14343440-14343276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
494-690
               

               
Cow position:
               
chr7:14087823-14087626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
494-763
               

               
Cow position:
               
chr7:32598589-32598861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
494-802
               

               
Cow position:
               
chr7:48672838-48672520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 153
               

               
Conread position:
               
494-842
               

               
Cow position:
               
chr7:36464174-36463809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
495-806
               

               
Cow position:
               
chr7:11783931-11784245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
496-795
               

               
Cow position:
               
chr7:44304823-44304528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
496-802
               

               
Cow position:
               
chr7:13058905-13058598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
496-802
               

               
Cow position:
               
chr7:34519699-34519401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
496-802
               

               
Cow position:
               
chr7:66246894-66246586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
497-709
               

               
Cow position:
               
chr7:35172286-35172506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
497-748
               

               
Cow position:
               
chr7:12267503-12267253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
498-802
               

               
Cow position:
               
chr7:49739832-49740150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
499-839
               

               
Cow position:
               
chr7:22013075-22012733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
500-802
               

               
Cow position:
               
chr7:41984373-41984677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
503-795
               

               
Cow position:
               
chr7:32721656-32721356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
503-799
               

               
Cow position:
               
chr7:5463807-5463509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
503-802
               

               
Cow position:
               
chr7:26389303-26388995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 236
               

               
Conread position:
               
505-796
               

               
Cow position:
               
chr7:37182909-37183213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
505-802
               

               
Cow position:
               
chr7:11590602-11590895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
506-802
               

               
Cow position:
               
chr7:6490189-6490496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
507-757
               

               
Cow position:
               
chr7:29225717-29225956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
507-844
               

               
Cow position:
               
chr7:17875373-17875037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
511-691
               

               
Cow position:
               
chr7:2139744-2139558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
511-786
               

               
Cow position:
               
chr7:14791172-14791444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
511-802
               

               
Cow position:
               
chr7:8358571-8358266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
511-835
               

               
Cow position:
               
chr7:7077332-7077011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
512-791
               

               
Cow position:
               
chr7:39954681-39954388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
512-801
               

               
Cow position:
               
chr7:1310500-1310209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
513-711
               

               
Cow position:
               
chr7:52705231-52705037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
513-726
               

               
Cow position:
               
chr7:14475344-14475558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
513-789
               

               
Cow position:
               
chr7:37675075-37674795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
513-795
               

               
Cow position:
               
chr7:13125124-13124846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
251, 26
               

               
Conread position:
               
513-802
               

               
Cow position:
               
chr7:2137174-2136876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
513-802
               

               
Cow position:
               
chr7:34102209-34101911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
514-696
               

               
Cow position:
               
chr7:307054-307240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
514-713
               

               
Cow position:
               
chr7:65570090-65570295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
514-796
               

               
Cow position:
               
chr7:30618620-30618907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
514-802
               

               
Cow position:
               
chr7:3503839-3503538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
515-664
               

               
Cow position:
               
chr7:29576339-29576488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
515-684
               

               
Cow position:
               
chr7:40117303-40117476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
515-760
               

               
Cow position:
               
chr7:14492985-14493239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr7:6420657-6420916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
515-787
               

               
Cow position:
               
chr7:4402073-4401791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
515-793
               

               
Cow position:
               
chr7:6795702-6796000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
515-797
               

               
Cow position:
               
chr7:15341745-15342030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 229
               

               
Conread position:
               
515-801
               

               
Cow position:
               
chr7:5640594-5640870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
516-802
               

               
Cow position:
               
chr7:36815628-36815920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
516-845
               

               
Cow position:
               
chr7:30593296-30592950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 215
               

               
Conread position:
               
517-659
               

               
Cow position:
               
chr7:6662711-6662856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
517-788
               

               
Cow position:
               
chr7:4818791-4819071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
517-792
               

               
Cow position:
               
chr7:16093489-16093219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
517-802
               

               
Cow position:
               
chr7:12316772-12316486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
517-802
               

               
Cow position:
               
chr7:29459987-29460253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
518-758
               

               
Cow position:
               
chr7:2236642-2236400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
518-770
               

               
Cow position:
               
chr7:8109978-8109726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
519-800
               

               
Cow position:
               
chr7:35084939-35084667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
521-687
               

               
Cow position:
               
chr7:49092816-49092652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
521-688
               

               
Cow position:
               
chr7:59019271-59019442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
521-802
               

               
Cow position:
               
chr7:47834055-47834349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
524-775
               

               
Cow position:
               
chr7:39177365-39177105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
525-802
               

               
Cow position:
               
chr7:11906399-11906684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
526-755
               

               
Cow position:
               
chr7:33356560-33356790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
533-787
               

               
Cow position:
               
chr7:2666282-2666538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
534-800
               

               
Cow position:
               
chr7:14788488-14788230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
534-802
               

               
Cow position:
               
chr7:65553926-65553652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
536-683
               

               
Cow position:
               
chr7:16296765-16296621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
538-817
               

               
Cow position:
               
chr7:6093840-6093568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
538-835
               

               
Cow position:
               
chr7:30679978-30680283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
539-707
               

               
Cow position:
               
chr7:6518278-6518443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
540-787
               

               
Cow position:
               
chr7:38218675-38218921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
542-761
               

               
Cow position:
               
chr7:14179250-14179468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
172, 91
               

               
Conread position:
               
543-692
               

               
Cow position:
               
chr7:68109415-68109561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
543-701
               

               
Cow position:
               
chr7:19826525-19826369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
543-756
               

               
Cow position:
               
chr7:54064862-54065075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
146, 203
               

               
Conread position:
               
543-776
               

               
Cow position:
               
chr7:32159503-32159738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 175
               

               
Conread position:
               
543-792
               

               
Cow position:
               
chr7:7240381-7240629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
543-795
               

               
Cow position:
               
chr7:11904684-11904945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
543-797
               

               
Cow position:
               
chr7:32435456-32435197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
543-797
               

               
Cow position:
               
chr7:64100492-64100748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
221, 174
               

               
Conread position:
               
543-802
               

               
Cow position:
               
chr7:5523411-5523682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
543-802
               

               
Cow position:
               
chr7:12990552-12990818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 107
               

               
Conread position:
               
543-802
               

               
Cow position:
               
chr7:14722828-14723085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
167, 114
               

               
Conread position:
               
543-802
               

               
Cow position:
               
chr7:17010935-17010669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 98
               

               
Conread position:
               
543-822
               

               
Cow position:
               
chr7:7594803-7594521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
544-658
               

               
Cow position:
               
chr7:10664161-10664276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
545-758
               

               
Cow position:
               
chr7:2921969-2921760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
545-761
               

               
Cow position:
               
chr7:736703-736919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 165
               

               
Conread position:
               
545-802
               

               
Cow position:
               
chr7:1348506-1348243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 169
               

               
Conread position:
               
546-690
               

               
Cow position:
               
chr7:24224925-24225070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
546-792
               

               
Cow position:
               
chr7:8836956-8837205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
213, 114
               

               
Conread position:
               
546-795
               

               
Cow position:
               
chr7:34403906-34404168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
546-796
               

               
Cow position:
               
chr7:29137271-29137521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
546-802
               

               
Cow position:
               
chr7:2242518-2242257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
546-802
               

               
Cow position:
               
chr7:12209514-12209263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
216, 63
               

               
Conread position:
               
547-706
               

               
Cow position:
               
chr7:1531331-1531174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
550-664
               

               
Cow position:
               
chr7:44460358-44460244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
550-772
               

               
Cow position:
               
chr7:26584770-26584552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 36
               

               
Conread position:
               
550-802
               

               
Cow position:
               
chr7:5643247-5643495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
212, 9
               

               
Conread position:
               
550-802
               

               
Cow position:
               
chr7:8646519-8646257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
551-686
               

               
Cow position:
               
chr7:6272210-6272079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
551-715
               

               
Cow position:
               
chr7:28598272-28598439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 109
               

               
Conread position:
               
553-802
               

               
Cow position:
               
chr7:17889235-17889481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
183, 33
               

               
Conread position:
               
553-807
               

               
Cow position:
               
chr7:28143951-28144204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
556-788
               

               
Cow position:
               
chr7:38994029-38994254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
206, 78
               

               
Conread position:
               
557-796
               

               
Cow position:
               
chr7:36939642-36939868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
206, 46
               

               
Conread position:
               
558-820
               

               
Cow position:
               
chr7:17969666-17969410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
559-695
               

               
Cow position:
               
chr7:6948645-6948512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
560-792
               

               
Cow position:
               
chr7:4379969-4379737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
200, 108
               

               
Conread position:
               
562-802
               

               
Cow position:
               
chr7:23408939-23408700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
562-811
               

               
Cow position:
               
chr7:16530321-16530070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
563-823
               

               
Cow position:
               
chr7:7893736-7894002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
567-713
               

               
Cow position:
               
chr7:61735481-61735336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
570-802
               

               
Cow position:
               
chr7:126741-126971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
205, 18
               

               
Conread position:
               
571-802
               

               
Cow position:
               
chr7:9023766-9023539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
571-802
               

               
Cow position:
               
chr7:23996841-23997076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
572-795
               

               
Cow position:
               
chr7:21050886-21051116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
574-796
               

               
Cow position:
               
chr7:35342901-35343119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
575-722
               

               
Cow position:
               
chr7:3912080-3911934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
575-766
               

               
Cow position:
               
chr7:23269744-23269930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
581-800
               

               
Cow position:
               
chr7:3542349-3542125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
182, 145
               

               
Conread position:
               
590-802
               

               
Cow position:
               
chr7:41941338-41941121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
606-793
               

               
Cow position:
               
chr7:4620391-4620573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
169, 83
               

               
Conread position:
               
608-779
               

               
Cow position:
               
chr7:64869255-64869083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
612-795
               

               
Cow position:
               
chr7:54881575-54881387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
612-835
               

               
Cow position:
               
chr7:15630097-15629870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
154, 80
               

               
Conread position:
               
615-802
               

               
Cow position:
               
chr7:30892170-30891978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
616-802
               

               
Cow position:
               
chr7:51491106-51491298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
623-842
               

               
Cow position:
               
chr7:8974344-8974569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
154, 103
               

               
Conread position:
               
624-855
               

               
Cow position:
               
chr7:1841213-1841445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
137, 141
               
Show alignments to all cow chromosomes.