Cow genome map

Conread name: Ss1.1-Pig4-TMW8043P13.5

Conread position: 143-383
Cow position: chr17:35018613-35018372 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 52

Conread position: 150-402
Cow position: chr17:43443229-43443481 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 92

Conread position: 282-569
Cow position: chr17:18829811-18829524 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 49

Conread position: 324-571
Cow position: chr17:19239579-19239829 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 50

Conread position: 346-604
Cow position: chr17:34870354-34870098 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 42

Conread position: 362-610
Cow position: chr17:10769248-10769499 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 129

Conread position: 367-621
Cow position: chr17:36818291-36818040 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 188, 40

Conread position: 371-571
Cow position: chr17:8615594-8615787 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 70

Conread position: 374-595
Cow position: chr17:34627598-34627818 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 32

Conread position: 375-612
Cow position: chr17:38139752-38139519 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 377-554
Cow position: chr17:8831897-8832075 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 377-569
Cow position: chr17:7163649-7163843 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 29

Conread position: 377-623
Cow position: chr17:12342237-12342481 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 90

Conread position: 378-613
Cow position: chr17:6569903-6570127 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 53

Conread position: 378-617
Cow position: chr17:21730049-21730290 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 65

Conread position: 379-607
Cow position: chr17:40855100-40854872 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 180

Conread position: 380-613
Cow position: chr17:26614491-26614719 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 92, 60

Conread position: 381-522
Cow position: chr17:37342050-37342192 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 89, 23

Conread position: 382-609
Cow position: chr17:33386663-33386434 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 196

Conread position: 383-609
Cow position: chr17:15634646-15634868 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 73

Conread position: 387-597
Cow position: chr17:15923073-15922867 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 162, 0

Conread position: 390-560
Cow position: chr17:8094075-8093908 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 12, 41

Conread position: 390-608
Cow position: chr17:8279480-8279691 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 48

Conread position: 391-609
Cow position: chr17:9748980-9748759 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 15

Conread position: 391-609
Cow position: chr17:10271716-10271509 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 47

Conread position: 391-609
Cow position: chr17:27256985-27257214 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 17, 196

Conread position: 391-613
Cow position: chr17:2271228-2271009 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 39

Conread position: 392-540
Cow position: chr17:6559084-6558934 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 15

Conread position: 393-602
Cow position: chr17:728133-728333 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 12

Conread position: 395-613
Cow position: chr17:13229605-13229388 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 109

Conread position: 396-609
Cow position: chr17:143954-144162 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 11

Conread position: 396-613
Cow position: chr17:3042705-3042486 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 106

Conread position: 397-613
Cow position: chr17:27819517-27819301 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 39

Conread position: 398-544
Cow position: chr17:42775043-42775190 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 398-557
Cow position: chr17:34784508-34784353 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 57

Conread position: 398-559
Cow position: chr17:7861478-7861640 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 9

Conread position: 398-572
Cow position: chr17:33925792-33925969 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 92

Conread position: 398-574
Cow position: chr17:43284869-43284693 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 9

Conread position: 398-575
Cow position: chr17:28536970-28536784 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 398-605
Cow position: chr17:5166854-5167049 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 9

Conread position: 398-609
Cow position: chr17:23803680-23803473 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 26, 60

Conread position: 398-609
Cow position: chr17:31798225-31798436 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 78, 9

Conread position: 398-609
Cow position: chr17:36400322-36400115 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 43

Conread position: 398-610
Cow position: chr17:3619863-3620073 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 119, 9

Conread position: 398-613
Cow position: chr17:18173607-18173808 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 9

Conread position: 398-613
Cow position: chr17:27505321-27505106 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 142

Conread position: 398-613
Cow position: chr17:32457346-32457556 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 41

Conread position: 398-652
Cow position: chr17:11655602-11655348 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 68, 9

Conread position: 399-573
Cow position: chr17:42435246-42435419 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 102

Conread position: 399-609
Cow position: chr17:20216390-20216181 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 74, 11

Conread position: 399-609
Cow position: chr17:26162203-26162408 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 106, 8

Conread position: 399-609
Cow position: chr17:36173743-36173959 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 37

Conread position: 399-610
Cow position: chr17:7205643-7205433 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 41

Conread position: 399-698
Cow position: chr17:10314645-10314346 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 77, 178

Conread position: 400-609
Cow position: chr17:33903702-33903905 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 7

Conread position: 402-609
Cow position: chr17:24880960-24880757 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 5

Conread position: 404-605
Cow position: chr17:9059918-9060128 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 161

Conread position: 404-606
Cow position: chr17:37138972-37138779 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 37

Conread position: 405-609
Cow position: chr17:7595371-7595168 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 151

Conread position: 406-613
Cow position: chr17:13715818-13716026 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 70, 49

Conread position: 407-609
Cow position: chr17:30236406-30236210 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 22

Conread position: 407-612
Cow position: chr17:39016313-39016109 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 20

Conread position: 407-633
Cow position: chr17:14278279-14278054 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 69, 175

Conread position: 410-613
Cow position: chr17:5360240-5360430 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 94

Conread position: 412-606
Cow position: chr17:10221060-10220868 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 92

Conread position: 412-609
Cow position: chr17:36216975-36217166 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 101

Conread position: 414-554
Cow position: chr17:11826248-11826389 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 419-607
Cow position: chr17:39012922-39012738 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 70

Conread position: 420-608
Cow position: chr17:21373876-21373691 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 20

Conread position: 423-606
Cow position: chr17:23318118-23318300 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 132

Conread position: 424-613
Cow position: chr17:33913375-33913567 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 157

Conread position: 425-554
Cow position: chr17:33930357-33930227 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 429-606
Cow position: chr17:4085949-4085775 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 125

Conread position: 432-609
Cow position: chr17:1455750-1455923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 56

Conread position: 433-554
Cow position: chr17:37043228-37043347 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 64

Conread position: 433-609
Cow position: chr17:18887586-18887753 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 434-560
Cow position: chr17:29270670-29270795 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 43

Conread position: 436-558
Cow position: chr17:23879339-23879462 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 439-612
Cow position: chr17:18568754-18568923 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 17

Conread position: 445-613
Cow position: chr17:8926039-8926204 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 130

Conread position: 446-554
Cow position: chr17:27781243-27781134 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 452-612
Cow position: chr17:11171958-11171803 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 32

Conread position: 457-607
Cow position: chr17:25180984-25181127 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 40

Conread position: 458-609
Cow position: chr17:25708121-25707973 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 95

Conread position: 480-657
Cow position: chr17:43640956-43641136 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 100

Show alignments to all cow chromosomes.