Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8043P13.5
        

               Conread position:
               319-502
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               352-613
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               125, 55
               

               Conread position:
               373-594
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               377-609
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               378-593
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               379-611
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               381-609
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               28, 183
               

               Conread position:
               381-609
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 171
               

               Conread position:
               386-542
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 11
               

               Conread position:
               390-609
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               390-609
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               390-609
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               391-604
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               391-609
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               392-581
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               125, 17
               

               Conread position:
               394-606
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               192, 36
               

               Conread position:
               395-595
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               396-609
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               397-562
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               397-602
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 186
               

               Conread position:
               397-613
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               137, 42
               

               Conread position:
               398-544
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               398-554
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               398-571
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               398-593
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               398-604
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               398-607
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               398-608
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               398-609
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               398-609
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               398-619
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 179
               

               Conread position:
               399-545
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               399-607
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               399-612
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               206, 71
               

               Conread position:
               399-613
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               400-559
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               400-575
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               400-591
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               400-601
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               400-606
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 182
               

               Conread position:
               400-610
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               400-613
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               403-613
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 175
               

               Conread position:
               404-609
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               151, 172
               

               Conread position:
               407-612
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               408-606
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               409-566
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               409-613
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 88
               

               Conread position:
               414-609
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               414-609
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               414-610
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               66, 175
               

               Conread position:
               414-611
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               414-613
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               417-609
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               171, 135
               

               Conread position:
               419-554
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               419-571
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               423-609
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               78, 143
               

               Conread position:
               424-554
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               425-609
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               426-613
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 155
               

               Conread position:
               427-609
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               13, 155
               

               Conread position:
               431-553
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               445-620
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               446-544
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               449-613
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               455-563
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               458-610
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               459-609
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               459-609
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               477-609
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               480-608
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 100
               
Show alignments to all cow chromosomes.