Cow genome map

Conread name: Ss1.1-Pig4-TMW8043P13.5

Conread position: 118-381
Cow position: chr20:5200936-5201196 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 143-384
Cow position: chr20:9035226-9035454 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 18

Conread position: 155-381
Cow position: chr20:924074-924296 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 174, 70

Conread position: 372-609
Cow position: chr20:2456280-2456048 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 72

Conread position: 376-606
Cow position: chr20:19266392-19266176 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 376-611
Cow position: chr20:35924537-35924767 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 33

Conread position: 378-610
Cow position: chr20:23235276-23235052 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 92, 12

Conread position: 390-583
Cow position: chr20:6104917-6105114 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 391-606
Cow position: chr20:33178295-33178498 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 164, 20

Conread position: 391-613
Cow position: chr20:10759241-10759461 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 7

Conread position: 391-614
Cow position: chr20:17363424-17363645 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 125

Conread position: 391-625
Cow position: chr20:15241533-15241763 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 7

Conread position: 392-622
Cow position: chr20:7386786-7386563 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 98

Conread position: 392-655
Cow position: chr20:16979983-16979715 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 189

Conread position: 393-607
Cow position: chr20:13465737-13465529 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 157, 14

Conread position: 393-609
Cow position: chr20:27001615-27001409 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 394-613
Cow position: chr20:4933839-4934057 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 157, 184

Conread position: 395-609
Cow position: chr20:17670407-17670199 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 11

Conread position: 395-610
Cow position: chr20:220839-220629 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 78, 128

Conread position: 397-530
Cow position: chr20:2801640-2801772 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 12

Conread position: 397-610
Cow position: chr20:5763067-5763279 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 10

Conread position: 398-542
Cow position: chr20:8556620-8556762 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 9

Conread position: 398-573
Cow position: chr20:39669169-39668996 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 17

Conread position: 398-607
Cow position: chr20:25686121-25686330 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 11

Conread position: 398-607
Cow position: chr20:30855533-30855736 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 61, 15

Conread position: 398-609
Cow position: chr20:25823503-25823294 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 81, 9

Conread position: 398-609
Cow position: chr20:26749987-26750202 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 156, 53

Conread position: 398-613
Cow position: chr20:1205710-1205918 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 62

Conread position: 398-615
Cow position: chr20:7101012-7100790 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 11

Conread position: 399-549
Cow position: chr20:7873760-7873909 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 399-559
Cow position: chr20:3105240-3105081 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 8

Conread position: 399-609
Cow position: chr20:8262141-8261927 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 7, 40

Conread position: 399-609
Cow position: chr20:13608845-13609049 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 80, 8

Conread position: 399-609
Cow position: chr20:24234369-24234174 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 8

Conread position: 399-611
Cow position: chr20:15073605-15073822 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 29

Conread position: 400-571
Cow position: chr20:14471342-14471519 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 7

Conread position: 400-584
Cow position: chr20:32972770-32972591 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 7

Conread position: 400-609
Cow position: chr20:14679842-14679638 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 148, 0

Conread position: 407-589
Cow position: chr20:32587574-32587398 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 407-599
Cow position: chr20:25146996-25146808 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 23

Conread position: 413-605
Cow position: chr20:17397052-17397240 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 130, 0

Conread position: 413-609
Cow position: chr20:4204498-4204309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 140

Conread position: 413-613
Cow position: chr20:42255071-42254874 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 142, 53

Conread position: 416-606
Cow position: chr20:39656452-39656271 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 81

Conread position: 418-613
Cow position: chr20:19865455-19865265 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 135

Conread position: 419-612
Cow position: chr20:32668175-32667984 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 20

Conread position: 427-581
Cow position: chr20:23604536-23604687 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 123

Conread position: 432-571
Cow position: chr20:35683212-35683349 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 121

Conread position: 433-571
Cow position: chr20:21236845-21236709 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 22

Conread position: 434-613
Cow position: chr20:25274101-25274275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 100

Conread position: 446-609
Cow position: chr20:40355301-40355147 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 463-589
Cow position: chr20:37450712-37450585 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 114

Conread position: 469-612
Cow position: chr20:34178322-34178459 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 498-609
Cow position: chr20:38124014-38123902 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 78

Show alignments to all cow chromosomes.