Cow genome map

Conread name: Ss1.1-Pig4-TMW8043P13.5

Conread position: 313-609
Cow position: chr21:36371808-36371524 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 367-607
Cow position: chr21:3254430-3254190 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 46

Conread position: 378-551
Cow position: chr21:23974007-23974181 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 378-609
Cow position: chr21:23800866-23801091 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 29

Conread position: 379-557
Cow position: chr21:44759906-44760089 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 134

Conread position: 386-609
Cow position: chr21:22352976-22353198 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 118

Conread position: 387-609
Cow position: chr21:42209369-42209593 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 19

Conread position: 389-613
Cow position: chr21:47715288-47715514 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 83, 108

Conread position: 390-553
Cow position: chr21:699059-698900 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 16

Conread position: 390-609
Cow position: chr21:6316466-6316254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 391-610
Cow position: chr21:45923411-45923616 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 391-611
Cow position: chr21:4276351-4276562 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 85, 13

Conread position: 391-613
Cow position: chr21:49649873-49649666 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 38

Conread position: 392-615
Cow position: chr21:33947001-33947221 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 85, 52

Conread position: 395-608
Cow position: chr21:39509139-39509349 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 395-609
Cow position: chr21:4723732-4723517 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 185

Conread position: 395-609
Cow position: chr21:9353698-9353483 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 12

Conread position: 396-569
Cow position: chr21:41197802-41197970 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 34

Conread position: 397-552
Cow position: chr21:27480693-27480537 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 133
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 43

Conread position: 397-610
Cow position: chr21:12301262-12301476 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 183

Conread position: 398-557
Cow position: chr21:44220613-44220451 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 398-570
Cow position: chr21:22398396-22398236 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 38

Conread position: 398-571
Cow position: chr21:30149998-30150167 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 398-572
Cow position: chr21:26147325-26147150 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 9

Conread position: 398-582
Cow position: chr21:17806892-17807070 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 79, 9

Conread position: 398-599
Cow position: chr21:37120964-37121164 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 184, 164

Conread position: 398-600
Cow position: chr21:8282510-8282321 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 72, 9

Conread position: 398-600
Cow position: chr21:49654315-49654116 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 11

Conread position: 398-606
Cow position: chr21:11675805-11676010 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 78, 155

Conread position: 398-608
Cow position: chr21:31576736-31576534 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 72, 30

Conread position: 398-608
Cow position: chr21:48290810-48291015 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 59

Conread position: 398-609
Cow position: chr21:17428744-17428535 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 105

Conread position: 398-609
Cow position: chr21:18941586-18941798 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 121

Conread position: 398-609
Cow position: chr21:31662247-31662041 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 79, 32

Conread position: 398-609
Cow position: chr21:31662713-31662502 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 9

Conread position: 398-613
Cow position: chr21:31004426-31004639 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 157

Conread position: 399-603
Cow position: chr21:25286760-25286559 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 8

Conread position: 399-608
Cow position: chr21:13737294-13737089 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 118, 65

Conread position: 399-609
Cow position: chr21:4099112-4098909 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 8

Conread position: 399-609
Cow position: chr21:7483108-7483313 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 25

Conread position: 399-609
Cow position: chr21:13755028-13754822 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 28

Conread position: 399-614
Cow position: chr21:24674962-24674752 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 14

Conread position: 400-609
Cow position: chr21:23397607-23397810 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 7

Conread position: 400-613
Cow position: chr21:15741837-15742056 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 198

Conread position: 401-554
Cow position: chr21:30053175-30053330 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 92

Conread position: 401-611
Cow position: chr21:21181422-21181213 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 86

Conread position: 404-606
Cow position: chr21:13417997-13418191 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 32

Conread position: 407-597
Cow position: chr21:15239516-15239331 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 32

Conread position: 407-608
Cow position: chr21:13358568-13358362 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 191

Conread position: 412-584
Cow position: chr21:9939955-9940127 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 78

Conread position: 413-595
Cow position: chr21:12087829-12087639 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 171

Conread position: 418-568
Cow position: chr21:16836719-16836876 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 32

Conread position: 424-571
Cow position: chr21:18782453-18782311 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 424-609
Cow position: chr21:37718227-37718406 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 424-611
Cow position: chr21:35997394-35997209 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 129

Conread position: 432-613
Cow position: chr21:26753705-26753523 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 26

Conread position: 434-606
Cow position: chr21:23768082-23767910 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 142

Conread position: 434-606
Cow position: chr21:23786243-23786071 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 142

Conread position: 445-608
Cow position: chr21:13256312-13256469 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 67

Conread position: 447-568
Cow position: chr21:44789155-44789278 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 452-610
Cow position: chr21:24698675-24698516 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 140

Conread position: 469-609
Cow position: chr21:1885614-1885753 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 107

Show alignments to all cow chromosomes.