Cow genome map
Conread name: | Ss1.1-Pig4-TMW8043P13.5 |
Conread position: | 313-609 |
Cow position: | chr21:36371808-36371524 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 367-607 |
Cow position: | chr21:3254430-3254190 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 164 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 109, 46 |
Conread position: | 378-551 |
Cow position: | chr21:23974007-23974181 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 378-609 |
Cow position: | chr21:23800866-23801091 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 165 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 140, 29 |
Conread position: | 379-557 |
Cow position: | chr21:44759906-44760089 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 134 |
Conread position: | 386-609 |
Cow position: | chr21:22352976-22353198 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 118 |
Conread position: | 387-609 |
Cow position: | chr21:42209369-42209593 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 154 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 80, 19 |
Conread position: | 389-613 |
Cow position: | chr21:47715288-47715514 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 83, 108 |
Conread position: | 390-553 |
Cow position: | chr21:699059-698900 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 80, 16 |
Conread position: | 390-609 |
Cow position: | chr21:6316466-6316254 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 152 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 391-610 |
Cow position: | chr21:45923411-45923616 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 153 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 391-611 |
Cow position: | chr21:4276351-4276562 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 166 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 85, 13 |
Conread position: | 391-613 |
Cow position: | chr21:49649873-49649666 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 166 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 19, 38 |
Conread position: | 392-615 |
Cow position: | chr21:33947001-33947221 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 85, 52 |
Conread position: | 395-608 |
Cow position: | chr21:39509139-39509349 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 158 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 395-609 |
Cow position: | chr21:4723732-4723517 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 83, 185 |
Conread position: | 395-609 |
Cow position: | chr21:9353698-9353483 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 164 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 75, 12 |
Conread position: | 396-569 |
Cow position: | chr21:41197802-41197970 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 159, 34 |
Conread position: | 397-552 |
Cow position: | chr21:27480693-27480537 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 133 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 77, 43 |
Conread position: | 397-610 |
Cow position: | chr21:12301262-12301476 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 120, 183 |
Conread position: | 398-557 |
Cow position: | chr21:44220613-44220451 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 398-570 |
Cow position: | chr21:22398396-22398236 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 157, 38 |
Conread position: | 398-571 |
Cow position: | chr21:30149998-30150167 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 398-572 |
Cow position: | chr21:26147325-26147150 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 78, 9 |
Conread position: | 398-582 |
Cow position: | chr21:17806892-17807070 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 148 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 79, 9 |
Conread position: | 398-599 |
Cow position: | chr21:37120964-37121164 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 155 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 184, 164 |
Conread position: | 398-600 |
Cow position: | chr21:8282510-8282321 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 160 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 398-600 |
Cow position: | chr21:49654315-49654116 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 95, 11 |
Conread position: | 398-606 |
Cow position: | chr21:11675805-11676010 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 78, 155 |
Conread position: | 398-608 |
Cow position: | chr21:31576736-31576534 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 163 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 72, 30 |
Conread position: | 398-608 |
Cow position: | chr21:48290810-48291015 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 71, 59 |
Conread position: | 398-609 |
Cow position: | chr21:17428744-17428535 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 81, 105 |
Conread position: | 398-609 |
Cow position: | chr21:18941586-18941798 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 167 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 81, 121 |
Conread position: | 398-609 |
Cow position: | chr21:31662247-31662041 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 79, 32 |
Conread position: | 398-609 |
Cow position: | chr21:31662713-31662502 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 76, 9 |
Conread position: | 398-613 |
Cow position: | chr21:31004426-31004639 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 158 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 48, 157 |
Conread position: | 399-603 |
Cow position: | chr21:25286760-25286559 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 77, 8 |
Conread position: | 399-608 |
Cow position: | chr21:13737294-13737089 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 158 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 118, 65 |
Conread position: | 399-609 |
Cow position: | chr21:4099112-4098909 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 77, 8 |
Conread position: | 399-609 |
Cow position: | chr21:7483108-7483313 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 134, 25 |
Conread position: | 399-609 |
Cow position: | chr21:13755028-13754822 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 120, 28 |
Conread position: | 399-614 |
Cow position: | chr21:24674962-24674752 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 149 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 77, 14 |
Conread position: | 400-609 |
Cow position: | chr21:23397607-23397810 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 76, 7 |
Conread position: | 400-613 |
Cow position: | chr21:15741837-15742056 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 8, 198 |
Conread position: | 401-554 |
Cow position: | chr21:30053175-30053330 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 125 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 69, 92 |
Conread position: | 401-611 |
Cow position: | chr21:21181422-21181213 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 75, 86 |
Conread position: | 404-606 |
Cow position: | chr21:13417997-13418191 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 72, 32 |
Conread position: | 407-597 |
Cow position: | chr21:15239516-15239331 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 407-608 |
Cow position: | chr21:13358568-13358362 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 60, 191 |
Conread position: | 412-584 |
Cow position: | chr21:9939955-9940127 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 54, 78 |
Conread position: | 413-595 |
Cow position: | chr21:12087829-12087639 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 153 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 60, 171 |
Conread position: | 418-568 |
Cow position: | chr21:16836719-16836876 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 9, 32 |
Conread position: | 424-571 |
Cow position: | chr21:18782453-18782311 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 424-609 |
Cow position: | chr21:37718227-37718406 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 424-611 |
Cow position: | chr21:35997394-35997209 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 50, 129 |
Conread position: | 432-613 |
Cow position: | chr21:26753705-26753523 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 140 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 44, 26 |
Conread position: | 434-606 |
Cow position: | chr21:23768082-23767910 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 121 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 121, 142 |
Conread position: | 434-606 |
Cow position: | chr21:23786243-23786071 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 123 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 121, 142 |
Conread position: | 445-608 |
Cow position: | chr21:13256312-13256469 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 32, 67 |
Conread position: | 447-568 |
Cow position: | chr21:44789155-44789278 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 452-610 |
Cow position: | chr21:24698675-24698516 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 128 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 22, 140 |
Conread position: | 469-609 |
Cow position: | chr21:1885614-1885753 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 83, 107 |
Show alignments to all cow chromosomes.