Cow genome map

Conread name: Ss1.1-Pig4-TMW8043P13.5

Conread position: 143-444
Cow position: chr22:12060413-12060703 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 68

Conread position: 355-608
Cow position: chr22:33386286-33386534 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 121, 78

Conread position: 365-521
Cow position: chr22:30919458-30919303 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 32

Conread position: 370-605
Cow position: chr22:7287723-7287483 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 211

Conread position: 372-569
Cow position: chr22:23009739-23009932 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 26

Conread position: 372-609
Cow position: chr22:29868406-29868636 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 36

Conread position: 376-606
Cow position: chr22:9594398-9594164 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 31

Conread position: 377-560
Cow position: chr22:25168093-25168272 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 140, 20

Conread position: 378-559
Cow position: chr22:23750980-23751161 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 99, 19

Conread position: 378-607
Cow position: chr22:32221828-32221614 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 12

Conread position: 382-544
Cow position: chr22:10555306-10555464 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 24

Conread position: 386-571
Cow position: chr22:44468999-44468810 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 56

Conread position: 390-557
Cow position: chr22:2135958-2135797 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 54

Conread position: 391-587
Cow position: chr22:23037557-23037755 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 164

Conread position: 391-590
Cow position: chr22:6859050-6859242 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 32

Conread position: 391-597
Cow position: chr22:17780541-17780744 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 163

Conread position: 391-606
Cow position: chr22:34675708-34675496 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 162

Conread position: 391-607
Cow position: chr22:13274668-13274456 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 7

Conread position: 391-609
Cow position: chr22:139124-139331 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 164, 45

Conread position: 391-609
Cow position: chr22:5622537-5622745 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 164, 16

Conread position: 392-613
Cow position: chr22:21650359-21650136 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 171

Conread position: 393-613
Cow position: chr22:7301657-7301870 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 162, 13

Conread position: 394-508
Cow position: chr22:26262920-26263030 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 394-609
Cow position: chr22:5927781-5927989 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 161, 12

Conread position: 395-606
Cow position: chr22:45355560-45355354 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 129, 12

Conread position: 395-608
Cow position: chr22:41389289-41389078 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 160, 11

Conread position: 397-538
Cow position: chr22:3063569-3063709 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 16

Conread position: 397-604
Cow position: chr22:26760889-26760690 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 13

Conread position: 398-505
Cow position: chr22:20840050-20839942 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 398-556
Cow position: chr22:26012063-26011912 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 398-566
Cow position: chr22:37554334-37554502 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 100

Conread position: 398-571
Cow position: chr22:19208141-19207974 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 157, 9

Conread position: 398-586
Cow position: chr22:32690259-32690442 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 161, 0

Conread position: 398-600
Cow position: chr22:45291504-45291305 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 164

Conread position: 398-604
Cow position: chr22:19040188-19040389 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 9

Conread position: 398-607
Cow position: chr22:13188059-13187853 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 9

Conread position: 398-607
Cow position: chr22:29004247-29004447 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 196, 12

Conread position: 398-609
Cow position: chr22:23580664-23580870 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 140

Conread position: 398-612
Cow position: chr22:42612640-42612423 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 9

Conread position: 399-558
Cow position: chr22:19069264-19069109 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 8

Conread position: 399-602
Cow position: chr22:15424314-15424112 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 8

Conread position: 399-608
Cow position: chr22:22999772-22999564 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 99

Conread position: 399-609
Cow position: chr22:4753576-4753786 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 88

Conread position: 399-609
Cow position: chr22:15358426-15358215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 181

Conread position: 399-609
Cow position: chr22:18486750-18486954 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 0

Conread position: 399-610
Cow position: chr22:17184506-17184718 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 8

Conread position: 399-613
Cow position: chr22:28685505-28685297 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 118, 8

Conread position: 399-639
Cow position: chr22:876459-876215 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 8

Conread position: 401-569
Cow position: chr22:17074548-17074380 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 149

Conread position: 401-603
Cow position: chr22:39983019-39983221 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 6

Conread position: 401-609
Cow position: chr22:44835833-44835618 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 38

Conread position: 402-610
Cow position: chr22:25715181-25714974 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 153, 5

Conread position: 407-554
Cow position: chr22:33067129-33066981 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 407-607
Cow position: chr22:9466781-9466585 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 32

Conread position: 408-532
Cow position: chr22:30521067-30520942 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 408-554
Cow position: chr22:32053545-32053398 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 408-606
Cow position: chr22:26941959-26941766 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 71, 31

Conread position: 408-609
Cow position: chr22:43262619-43262428 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 33

Conread position: 412-553
Cow position: chr22:13057539-13057682 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 415-605
Cow position: chr22:42945889-42946075 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 43

Conread position: 415-608
Cow position: chr22:26764192-26764005 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 416-609
Cow position: chr22:2913440-2913249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 123

Conread position: 419-607
Cow position: chr22:4651340-4651148 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 164

Conread position: 430-571
Cow position: chr22:23270197-23270340 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 433-608
Cow position: chr22:22997623-22997447 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 138

Conread position: 437-613
Cow position: chr22:15398435-15398612 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 87

Conread position: 440-605
Cow position: chr22:14119116-14118954 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 113

Conread position: 445-570
Cow position: chr22:1277204-1277078 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 62

Conread position: 446-613
Cow position: chr22:10649647-10649811 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 107

Conread position: 449-606
Cow position: chr22:1998413-1998256 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 120

Conread position: 457-608
Cow position: chr22:12535660-12535807 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 31

Conread position: 457-613
Cow position: chr22:26057502-26057346 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 86

Conread position: 466-620
Cow position: chr22:23016846-23017001 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 32

Show alignments to all cow chromosomes.