Cow genome map

Conread name: Ss1.1-Pig4-TMW8043P13.5

Conread position: 375-609
Cow position: chr27:783457-783683 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 375-611
Cow position: chr27:12244376-12244140 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 32

Conread position: 378-609
Cow position: chr27:12247443-12247661 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 25

Conread position: 379-522
Cow position: chr27:19057039-19056896 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 379-557
Cow position: chr27:1674903-1675081 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 28

Conread position: 382-584
Cow position: chr27:11746344-11746547 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 9

Conread position: 382-600
Cow position: chr27:16526085-16525870 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 171

Conread position: 390-607
Cow position: chr27:11356766-11356560 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 19

Conread position: 391-521
Cow position: chr27:11322372-11322499 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 65

Conread position: 391-544
Cow position: chr27:1085183-1085033 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 39

Conread position: 391-564
Cow position: chr27:2403512-2403341 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 39

Conread position: 391-571
Cow position: chr27:6347987-6347808 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 29

Conread position: 391-608
Cow position: chr27:26441281-26441065 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 15

Conread position: 391-609
Cow position: chr27:8048965-8048756 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 79, 16

Conread position: 391-609
Cow position: chr27:25998472-25998686 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 16

Conread position: 391-613
Cow position: chr27:21578810-21578587 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 85, 187

Conread position: 391-613
Cow position: chr27:22108442-22108216 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 169

Conread position: 391-620
Cow position: chr27:20766188-20765965 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 120

Conread position: 392-549
Cow position: chr27:31339985-31339830 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 14

Conread position: 396-613
Cow position: chr27:23662821-23662609 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 10

Conread position: 397-518
Cow position: chr27:18028384-18028505 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 10

Conread position: 397-553
Cow position: chr27:1899800-1899644 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 52

Conread position: 397-608
Cow position: chr27:6159759-6159963 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 157, 19

Conread position: 397-609
Cow position: chr27:26299617-26299824 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 156, 40

Conread position: 398-599
Cow position: chr27:24225124-24224926 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 32

Conread position: 398-601
Cow position: chr27:10119310-10119103 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 9

Conread position: 398-607
Cow position: chr27:24341674-24341892 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 184

Conread position: 398-609
Cow position: chr27:14937656-14937446 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 15

Conread position: 398-612
Cow position: chr27:19601148-19601367 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 9

Conread position: 398-612
Cow position: chr27:31251542-31251329 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 83

Conread position: 398-613
Cow position: chr27:2847627-2847842 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 9

Conread position: 398-613
Cow position: chr27:8430666-8430453 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 9

Conread position: 398-613
Cow position: chr27:30790245-30790446 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 49

Conread position: 399-608
Cow position: chr27:1536953-1536737 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 71, 8

Conread position: 399-608
Cow position: chr27:19544147-19543937 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 99, 90

Conread position: 399-609
Cow position: chr27:13958570-13958360 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 77, 28

Conread position: 399-609
Cow position: chr27:13970607-13970406 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 80

Conread position: 399-609
Cow position: chr27:16493358-16493564 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 110

Conread position: 399-613
Cow position: chr27:25982944-25982739 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 399-622
Cow position: chr27:13005622-13005840 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 118

Conread position: 400-559
Cow position: chr27:17875367-17875207 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 7

Conread position: 400-608
Cow position: chr27:30365093-30365301 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 78, 10

Conread position: 400-609
Cow position: chr27:25970182-25970383 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 7

Conread position: 400-609
Cow position: chr27:29039165-29038957 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 7

Conread position: 401-532
Cow position: chr27:7983328-7983196 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 404-609
Cow position: chr27:19083939-19083732 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 72, 168

Conread position: 405-609
Cow position: chr27:27050126-27049927 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 68, 31

Conread position: 408-554
Cow position: chr27:29339521-29339667 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 31

Conread position: 408-590
Cow position: chr27:25879884-25880066 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 171

Conread position: 408-610
Cow position: chr27:6453990-6454193 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 81

Conread position: 413-550
Cow position: chr27:9692230-9692095 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 126

Conread position: 415-600
Cow position: chr27:26161293-26161476 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 82

Conread position: 421-571
Cow position: chr27:18219193-18219340 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 6

Conread position: 424-587
Cow position: chr27:21991329-21991498 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 428-610
Cow position: chr27:21971080-21970902 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 121

Conread position: 431-606
Cow position: chr27:21681520-21681344 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 66

Conread position: 445-612
Cow position: chr27:13977727-13977558 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 50

Conread position: 446-613
Cow position: chr27:21138650-21138814 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 108

Conread position: 448-609
Cow position: chr27:6883855-6884017 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 129

Show alignments to all cow chromosomes.