Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043P13.5 | 
| Conread position: | 343-591 | 
| Cow position: | chr6:47192247-47192494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 64 | 
| Conread position: | 352-608 | 
| Cow position: | chr6:4163900-4164153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 15, 56 | 
| Conread position: | 367-542 | 
| Cow position: | chr6:50287524-50287698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 103, 38 | 
| Conread position: | 371-548 | 
| Cow position: | chr6:33985473-33985299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 374-604 | 
| Cow position: | chr6:36652665-36652439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 102, 20 | 
| Conread position: | 374-608 | 
| Cow position: | chr6:9026758-9026537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 99, 17 | 
| Conread position: | 377-606 | 
| Cow position: | chr6:30160563-30160341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 378-601 | 
| Cow position: | chr6:15943758-15943980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 95, 28 | 
| Conread position: | 378-608 | 
| Cow position: | chr6:51294526-51294298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 98, 29 | 
| Conread position: | 380-609 | 
| Cow position: | chr6:40410-40637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 169, 33 | 
| Conread position: | 390-574 | 
| Cow position: | chr6:37612339-37612153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 18, 177 | 
| Conread position: | 391-607 | 
| Cow position: | chr6:48572653-48572866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 85, 16 | 
| Conread position: | 391-613 | 
| Cow position: | chr6:50034502-50034718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 10, 40 | 
| Conread position: | 391-623 | 
| Cow position: | chr6:59496446-59496217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 86, 39 | 
| Conread position: | 392-584 | 
| Cow position: | chr6:11790207-11790011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 16, 183 | 
| Conread position: | 392-612 | 
| Cow position: | chr6:31564103-31564327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 57, 97 | 
| Conread position: | 392-613 | 
| Cow position: | chr6:38453550-38453762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 16, 46 | 
| Conread position: | 393-615 | 
| Cow position: | chr6:20255177-20255407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 83, 182 | 
| Conread position: | 394-607 | 
| Cow position: | chr6:53674087-53673878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 161, 12 | 
| Conread position: | 394-614 | 
| Cow position: | chr6:24622753-24622966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 78, 10 | 
| Conread position: | 395-577 | 
| Cow position: | chr6:28810779-28810955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 121, 19 | 
| Conread position: | 395-624 | 
| Cow position: | chr6:41042143-41041925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 396-609 | 
| Cow position: | chr6:38018483-38018274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 159, 80 | 
| Conread position: | 396-609 | 
| Cow position: | chr6:43760578-43760380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 81, 11 | 
| Conread position: | 397-555 | 
| Cow position: | chr6:31225931-31225773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 79, 9 | 
| Conread position: | 397-569 | 
| Cow position: | chr6:24650067-24649897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 80, 10 | 
| Conread position: | 397-599 | 
| Cow position: | chr6:15782289-15782492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 79, 180 | 
| Conread position: | 397-599 | 
| Cow position: | chr6:56376128-56376326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 158, 10 | 
| Conread position: | 397-603 | 
| Cow position: | chr6:28795559-28795355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 73, 42 | 
| Conread position: | 397-613 | 
| Cow position: | chr6:19427671-19427465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 80, 45 | 
| Conread position: | 397-658 | 
| Cow position: | chr6:53264576-53264842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 80, 42 | 
| Conread position: | 398-553 | 
| Cow position: | chr6:28278896-28278745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 398-559 | 
| Cow position: | chr6:22863044-22863198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 78, 9 | 
| Conread position: | 398-576 | 
| Cow position: | chr6:7707358-7707178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 398-581 | 
| Cow position: | chr6:38594017-38594196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 157, 9 | 
| Conread position: | 398-596 | 
| Cow position: | chr6:16219834-16220035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 20, 142 | 
| Conread position: | 398-606 | 
| Cow position: | chr6:51840510-51840294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 194 | 
| Conread position: | 398-607 | 
| Cow position: | chr6:33917615-33917826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 73, 9 | 
| Conread position: | 398-608 | 
| Cow position: | chr6:56860763-56860560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 125, 41 | 
| Conread position: | 398-609 | 
| Cow position: | chr6:6994735-6994939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 72, 9 | 
| Conread position: | 398-609 | 
| Cow position: | chr6:41655812-41656030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 68, 97 | 
| Conread position: | 398-609 | 
| Cow position: | chr6:55475480-55475267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 68, 183 | 
| Conread position: | 398-611 | 
| Cow position: | chr6:20754078-20754291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 78, 15 | 
| Conread position: | 398-611 | 
| Cow position: | chr6:31425335-31425550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 77, 39 | 
| Conread position: | 398-612 | 
| Cow position: | chr6:4023326-4023112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 78, 184 | 
| Conread position: | 398-613 | 
| Cow position: | chr6:6367449-6367658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 73, 51 | 
| Conread position: | 398-613 | 
| Cow position: | chr6:6943463-6943671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 157, 9 | 
| Conread position: | 398-613 | 
| Cow position: | chr6:24545837-24545622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 78, 9 | 
| Conread position: | 398-614 | 
| Cow position: | chr6:2324000-2324214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 72, 57 | 
| Conread position: | 398-615 | 
| Cow position: | chr6:37054208-37053996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 398-641 | 
| Cow position: | chr6:52705356-52705594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 78, 9 | 
| Conread position: | 399-549 | 
| Cow position: | chr6:60423119-60423268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 399-553 | 
| Cow position: | chr6:47624664-47624813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 399-590 | 
| Cow position: | chr6:28165047-28164854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 78, 8 | 
| Conread position: | 399-606 | 
| Cow position: | chr6:827485-827687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 80, 8 | 
| Conread position: | 399-608 | 
| Cow position: | chr6:47026699-47026490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 77, 8 | 
| Conread position: | 399-613 | 
| Cow position: | chr6:32412418-32412626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 82, 51 | 
| Conread position: | 400-597 | 
| Cow position: | chr6:35774761-35774958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 70, 7 | 
| Conread position: | 400-606 | 
| Cow position: | chr6:13718986-13718779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 7 | 
| Conread position: | 400-607 | 
| Cow position: | chr6:24222937-24223140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 79, 7 | 
| Conread position: | 400-609 | 
| Cow position: | chr6:24583012-24583209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 77, 19 | 
| Conread position: | 407-575 | 
| Cow position: | chr6:36892118-36892284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 67, 89 | 
| Conread position: | 407-611 | 
| Cow position: | chr6:41679296-41679096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 70, 83 | 
| Conread position: | 407-613 | 
| Cow position: | chr6:510089-510294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 148, 91 | 
| Conread position: | 408-585 | 
| Cow position: | chr6:32809724-32809549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 147, 65 | 
| Conread position: | 408-599 | 
| Cow position: | chr6:17534304-17534491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 147, 104 | 
| Conread position: | 408-606 | 
| Cow position: | chr6:53939178-53938979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 68, 53 | 
| Conread position: | 408-608 | 
| Cow position: | chr6:47858504-47858304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 19, 87 | 
| Conread position: | 408-609 | 
| Cow position: | chr6:24558092-24557897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 409-613 | 
| Cow position: | chr6:7173547-7173741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 105, 21 | 
| Conread position: | 409-613 | 
| Cow position: | chr6:38914654-38914452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 65, 139 | 
| Conread position: | 412-610 | 
| Cow position: | chr6:46676221-46676416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 22, 10 | 
| Conread position: | 413-609 | 
| Cow position: | chr6:54144512-54144321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 64, 140 | 
| Conread position: | 413-612 | 
| Cow position: | chr6:32277151-32276955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 63, 25 | 
| Conread position: | 413-613 | 
| Cow position: | chr6:52002561-52002368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 414-585 | 
| Cow position: | chr6:15754049-15753878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 141, 25 | 
| Conread position: | 415-611 | 
| Cow position: | chr6:10237541-10237348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 60, 138 | 
| Conread position: | 416-545 | 
| Cow position: | chr6:1907726-1907596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 417-613 | 
| Cow position: | chr6:32798670-32798862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 418-609 | 
| Cow position: | chr6:1890373-1890564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 57, 139 | 
| Conread position: | 419-584 | 
| Cow position: | chr6:7498266-7498423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 51, 20 | 
| Conread position: | 425-609 | 
| Cow position: | chr6:59588211-59588391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 44, 55 | 
| Conread position: | 428-609 | 
| Cow position: | chr6:18582621-18582795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 49, 68 | 
| Conread position: | 430-574 | 
| Cow position: | chr6:29649298-29649152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 430-603 | 
| Cow position: | chr6:57118749-57118923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 21, 39 | 
| Conread position: | 430-613 | 
| Cow position: | chr6:16733607-16733428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 41, 91 | 
| Conread position: | 440-609 | 
| Cow position: | chr6:60503560-60503393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 36, 56 | 
| Conread position: | 445-608 | 
| Cow position: | chr6:44371763-44371931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 32, 43 | 
| Conread position: | 445-609 | 
| Cow position: | chr6:29412611-29412771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 31, 108 | 
| Conread position: | 445-611 | 
| Cow position: | chr6:18469056-18469216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 163, 50 | 
| Conread position: | 457-614 | 
| Cow position: | chr6:2583025-2582867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 120 | 
| Conread position: | 468-605 | 
| Cow position: | chr6:51387904-51387765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 11, 113 | 
| Conread position: | 468-613 | 
| Cow position: | chr6:7836069-7835927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 11, 82 | 
Show alignments to all cow chromosomes.
