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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8043P14.3
        

               
Conread position:
               
53-1125
               

               
Cow position:
               
chr21:6863908-6862842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1075
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
929, 919
               

               
Conread position:
               
56-1124
               

               
Cow position:
               
chr21:4958422-4957354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1070
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
1008, 1029
               

               
Conread position:
               
399-1124
               

               
Cow position:
               
chr21:4092095-4092818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
664, 673
               

               
Conread position:
               
593-764
               

               
Cow position:
               
chr21:23586926-23586750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
612-764
               

               
Cow position:
               
chr21:15584395-15584540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
857-1130
               

               
Cow position:
               
chr21:8274616-8274346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
100, 220
               

               
Conread position:
               
860-1110
               

               
Cow position:
               
chr21:33832078-33831824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 225
               

               
Conread position:
               
864-1094
               

               
Cow position:
               
chr21:6102748-6102519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 90
               

               
Conread position:
               
866-1125
               

               
Cow position:
               
chr21:1179356-1179099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
869-1130
               

               
Cow position:
               
chr21:44514848-44515116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
870-1078
               

               
Cow position:
               
chr21:26736730-26736512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
871-1105
               

               
Cow position:
               
chr21:35573301-35573070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
873-1129
               

               
Cow position:
               
chr21:4079940-4080195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
874-1082
               

               
Cow position:
               
chr21:18818745-18818535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
874-1094
               

               
Cow position:
               
chr21:1058386-1058617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
874-1105
               

               
Cow position:
               
chr21:44761769-44761539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
190, 10
               

               
Conread position:
               
874-1118
               

               
Cow position:
               
chr21:43901-44146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
874-1118
               

               
Cow position:
               
chr21:44804671-44804431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
874-1120
               

               
Cow position:
               
chr21:9006170-9006417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
874-1124
               

               
Cow position:
               
chr21:9201774-9202026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
874-1124
               

               
Cow position:
               
chr21:9209223-9209472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
874-1124
               

               
Cow position:
               
chr21:11509853-11510102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 10
               

               
Conread position:
               
874-1125
               

               
Cow position:
               
chr21:40013776-40013525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 211
               

               
Conread position:
               
874-1128
               

               
Cow position:
               
chr21:25475718-25475972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
874-1130
               

               
Cow position:
               
chr21:8420256-8420496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
189, 93
               

               
Conread position:
               
874-1131
               

               
Cow position:
               
chr21:4282278-4282025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 190
               

               
Conread position:
               
874-1134
               

               
Cow position:
               
chr21:4998899-4998638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 209
               

               
Conread position:
               
874-1146
               

               
Cow position:
               
chr21:7672709-7672987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
876-1053
               

               
Cow position:
               
chr21:42390614-42390432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
876-1105
               

               
Cow position:
               
chr21:49662833-49662600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
876-1115
               

               
Cow position:
               
chr21:21027376-21027626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
876-1124
               

               
Cow position:
               
chr21:31039764-31039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
876-1128
               

               
Cow position:
               
chr21:34617969-34618227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 213
               

               
Conread position:
               
876-1130
               

               
Cow position:
               
chr21:220550-220808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
876-1131
               

               
Cow position:
               
chr21:23293566-23293313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
187, 120
               

               
Conread position:
               
876-1131
               

               
Cow position:
               
chr21:24130674-24130923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 158
               

               
Conread position:
               
876-1132
               

               
Cow position:
               
chr21:2906313-2906054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
876-1132
               

               
Cow position:
               
chr21:13190022-13190282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
877-1006
               

               
Cow position:
               
chr21:2767915-2767786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1018
               

               
Cow position:
               
chr21:29955659-29955518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1027
               

               
Cow position:
               
chr21:43266574-43266424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1032
               

               
Cow position:
               
chr21:33350292-33350445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
877-1034
               

               
Cow position:
               
chr21:26241129-26241287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
877-1036
               

               
Cow position:
               
chr21:4812415-4812256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1041
               

               
Cow position:
               
chr21:29015572-29015406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
877-1041
               

               
Cow position:
               
chr21:29826460-29826290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
877-1051
               

               
Cow position:
               
chr21:24111040-24110865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
877-1053
               

               
Cow position:
               
chr21:38908128-38908309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
877-1057
               

               
Cow position:
               
chr21:27613854-27614040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
877-1059
               

               
Cow position:
               
chr21:13752201-13752383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1060
               

               
Cow position:
               
chr21:20243704-20243516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
877-1060
               

               
Cow position:
               
chr21:46143310-46143496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr21:17454993-17455176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr21:18828748-18828564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr21:28057181-28057371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
877-1063
               

               
Cow position:
               
chr21:2293274-2293087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
877-1071
               

               
Cow position:
               
chr21:33107575-33107380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr21:19436814-19436611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr21:27623495-27623696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr21:28617190-28617389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
877-1075
               

               
Cow position:
               
chr21:9363455-9363250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
877-1076
               

               
Cow position:
               
chr21:8686644-8686444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1076
               

               
Cow position:
               
chr21:23341570-23341771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1078
               

               
Cow position:
               
chr21:34835866-34835663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
877-1078
               

               
Cow position:
               
chr21:36756197-36756405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
108, 182
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr21:10000700-10000497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr21:16293004-16293218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr21:20575871-20575663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
877-1080
               

               
Cow position:
               
chr21:2810524-2810321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
186, 122
               

               
Conread position:
               
877-1080
               

               
Cow position:
               
chr21:3813878-3813674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr21:28839890-28840090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr21:31252917-31253121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
186, 17
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr21:36995602-36995398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr21:45355026-45355237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 205
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:2261092-2260877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:12802194-12801985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:21000466-21000255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:25799953-25800164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:28768847-28768641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:31661295-31661506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 173
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr21:40128424-40128219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1083
               

               
Cow position:
               
chr21:29855263-29855467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr21:31900-32113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
185, 90
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr21:10777368-10777152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr21:20910516-20910306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr21:28210775-28210988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
186, 65
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr21:32560049-32559835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1092
               

               
Cow position:
               
chr21:36956547-36956765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:1752309-1752525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:2927643-2927426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
168, 27
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:10045826-10046043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
186, 96
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:29785731-29785951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:31661645-31661866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:45781818-45781601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 167
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr21:46132407-46132193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
86, 185
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:3765848-3765632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:4277013-4276802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
186, 39
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:5634605-5634825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:6051066-6051290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:25473091-25473309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 173
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr21:38450093-38449870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 204
               

               
Conread position:
               
877-1097
               

               
Cow position:
               
chr21:12075818-12075604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
877-1098
               

               
Cow position:
               
chr21:30151036-30150807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 185
               

               
Conread position:
               
877-1102
               

               
Cow position:
               
chr21:48531099-48531324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1103
               

               
Cow position:
               
chr21:446646-446872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
877-1103
               

               
Cow position:
               
chr21:9218524-9218741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
179, 78
               

               
Conread position:
               
877-1103
               

               
Cow position:
               
chr21:27146616-27146388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1103
               

               
Cow position:
               
chr21:32358976-32358750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1104
               

               
Cow position:
               
chr21:44074050-44074261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr21:16889925-16889697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr21:19050897-19050670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr21:27619601-27619374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr21:31040850-31040620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1106
               

               
Cow position:
               
chr21:13257259-13257488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 94
               

               
Conread position:
               
877-1108
               

               
Cow position:
               
chr21:3496587-3496357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
877-1109
               

               
Cow position:
               
chr21:22464378-22464611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 207
               

               
Conread position:
               
877-1110
               

               
Cow position:
               
chr21:26829648-26829419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
877-1115
               

               
Cow position:
               
chr21:5630091-5629845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 132
               

               
Conread position:
               
877-1116
               

               
Cow position:
               
chr21:32297913-32297674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1117
               

               
Cow position:
               
chr21:4473429-4473191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:2935161-2934922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:8126196-8125962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:11195722-11195963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:22855811-22856048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 128
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:26756804-26756563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:26875510-26875753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:34181584-34181827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:38691783-38692023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:44122644-44122887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 206
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr21:48484851-48484609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr21:2514763-2515007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr21:5857547-5857303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr21:25598583-25598827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr21:42443018-42442774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:1780943-1781187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:2472858-2472611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:7666467-7666221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:17208085-17208323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:26744368-26744107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr21:33901345-33901591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:48062-48311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:168057-167809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 209
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:684077-684316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
186, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:750327-750574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:2871127-2870880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:2877923-2877676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:3173706-3173958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:5021057-5021304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:5641919-5641672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:6063672-6063931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:7038274-7038027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:7047266-7047021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:7525036-7525283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:7597352-7597098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:10075345-10075100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:10263630-10263880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:10436759-10437005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 81
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:10571189-10571436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:10756830-10757077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:11143931-11143684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:11292625-11292874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:11353411-11353658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:13632479-13632725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:13735243-13734996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:15584811-15584566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:16575528-16575281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:16794929-16795176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:17411918-17411671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:17539323-17539570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:18935361-18935597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:19350942-19350696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:19614163-19614409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:19626791-19626544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:19702113-19702360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:19957820-19958062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:20370284-20370531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:21103637-21103884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:21480590-21480343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:21624003-21624250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:21909944-21910191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:22100281-22100034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:23329424-23329176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:24297171-24296928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:25738288-25738041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:26399866-26399619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:26628686-26628933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:26633088-26632828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:26854774-26854527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:27036367-27036614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:29423977-29424222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:29954809-29955056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:30134708-30134952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:30655558-30655805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:30966024-30965776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:31948481-31948728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:31950332-31950579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:33245570-33245325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:33709581-33709334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:33770596-33770843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 195
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:34074556-34074803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:34684941-34685186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:34900594-34900841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:36225337-36225583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 42
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:36376921-36377173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 149
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:36892313-36892066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:38848881-38848634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:39225029-39224782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:39486355-39486109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 137
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:39700487-39700240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:40479180-40479427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:41795805-41795558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:42917712-42917959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:47767790-47767547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:47978186-47978432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr21:48459280-48459032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:451793-452041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:1196456-1196704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:4732628-4732380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:5840762-5841009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 107
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:18574433-18574681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:26835704-26835458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:27607774-27607526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 98
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:28259579-28259834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 213
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:31435946-31436184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
186, 71
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:31512352-31512105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:33316446-33316205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:33933795-33933547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:34301494-34301743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 207
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:36781044-36781287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:39429537-39429785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 202
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:42558693-42558941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 202
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:47140104-47139856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:47429259-47429506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr21:47649260-47649504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
877-1126
               

               
Cow position:
               
chr21:30571161-30570912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1127
               

               
Cow position:
               
chr21:471212-471474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
877-1127
               

               
Cow position:
               
chr21:3920623-3920372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr21:13070275-13070020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr21:23658129-23658384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr21:33415202-33414952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 205
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr21:34251944-34251694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr21:37874106-37874358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 207
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:4559154-4558902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
187, 59
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:9711126-9710863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
100, 95
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:12506995-12507252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 226
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:14727645-14727888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
186, 108
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:20234689-20234428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:32814228-32813969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 222
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:36711782-36712038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 213
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr21:37942101-37941846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 194
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:45634-45887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 207
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:363242-363497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 208
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:612178-611927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:1803165-1802913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:2420094-2420346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:4098478-4098717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:5237995-5238237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
189, 202
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:8981536-8981288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 207
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:11676676-11676410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:13111208-13110955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 209
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:14762925-14762665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:15545773-15545521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 112
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:19882326-19882065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:20588620-20588873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:21216552-21216299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:23683131-23683392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 228
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:28477214-28477463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:29253298-29253047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 185
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:29839754-29840005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:31975061-31975321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:36657158-36657415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 214
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:41957594-41957332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
134, 220
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:42540632-42540378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:43240453-43240700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
189, 48
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:44331702-44331445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:44657907-44658159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 205
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr21:47823683-47823430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 213
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:393611-393864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 83
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:725299-725049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:912372-912124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
215, 155
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:1463822-1464071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:3236118-3236373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:4189429-4189677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
177, 88
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:4905380-4905129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 211
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:5595252-5595504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 197
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:5649496-5649749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:5898821-5898555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:6697502-6697249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:6765111-6764859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 18
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:7564733-7564479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:7717198-7716948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 123
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:9981099-9980858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
184, 141
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:12365976-12366230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:13395144-13395398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:20262747-20262491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 210
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:20925916-20925664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 163
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:22719185-22718938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:23192930-23192675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 209
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:24222950-24222695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:27230202-27229952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 62
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:27341996-27341754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:27712847-27712589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 101
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:27743330-27743585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:28442325-28442587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:30250616-30250366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
186, 164
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:31691085-31691321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
186, 63
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:32535574-32535819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:33420127-33419872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:33579787-33580030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:33729024-33729277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:33983220-33982966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:34391377-34391128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 166
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:34658627-34658877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:34738183-34738441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:36163367-36163120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:36297086-36297321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:37299056-37299310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:38917824-38918057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:44671341-44671596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
44, 207
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr21:48638154-48637903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
877-1132
               

               
Cow position:
               
chr21:34254690-34254438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr21:2904874-2904614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr21:20549333-20549062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr21:46912132-46912390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
877-1138
               

               
Cow position:
               
chr21:17794608-17794346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr21:2657184-2657440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
184, 36
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr21:12153724-12153987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 46
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr21:38900373-38900626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr21:42464258-42463989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 192
               

               
Conread position:
               
877-1149
               

               
Cow position:
               
chr21:1765617-1765343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 192
               

               
Conread position:
               
877-1150
               

               
Cow position:
               
chr21:28599360-28599630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
877-1150
               

               
Cow position:
               
chr21:31576097-31576373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 212
               

               
Conread position:
               
877-1152
               

               
Cow position:
               
chr21:4279224-4279493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 57
               

               
Conread position:
               
877-1191
               

               
Cow position:
               
chr21:30897008-30897316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 122
               

               
Conread position:
               
877-1206
               

               
Cow position:
               
chr21:30354764-30355088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
877-1208
               

               
Cow position:
               
chr21:81662-81983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
877-1210
               

               
Cow position:
               
chr21:32447131-32447463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1220
               

               
Cow position:
               
chr21:3782689-3783024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1229
               

               
Cow position:
               
chr21:21785498-21785147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1242
               

               
Cow position:
               
chr21:44281244-44280882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 208
               

               
Conread position:
               
877-1256
               

               
Cow position:
               
chr21:34899766-34899390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
878-1065
               

               
Cow position:
               
chr21:28026715-28026903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
878-1074
               

               
Cow position:
               
chr21:28934959-28935161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
878-1094
               

               
Cow position:
               
chr21:23283243-23283023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
878-1113
               

               
Cow position:
               
chr21:29214565-29214331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
185, 197
               

               
Conread position:
               
878-1120
               

               
Cow position:
               
chr21:36505646-36505406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr21:2495581-2495338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr21:4035400-4035157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
186, 99
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr21:45842084-45841835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 208
               

               
Conread position:
               
878-1125
               

               
Cow position:
               
chr21:28914770-28914526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 13
               

               
Conread position:
               
878-1128
               

               
Cow position:
               
chr21:27376040-27376289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 58
               

               
Conread position:
               
878-1129
               

               
Cow position:
               
chr21:18289254-18289503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
878-1129
               

               
Cow position:
               
chr21:30849346-30849098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
179, 8
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr21:642936-643175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr21:23606261-23606516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr21:17433662-17433412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
162, 183
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr21:29069728-29069486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
878-1144
               

               
Cow position:
               
chr21:17412702-17412439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
186, 207
               

               
Conread position:
               
878-1144
               

               
Cow position:
               
chr21:17452422-17452162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
878-1144
               

               
Cow position:
               
chr21:17713904-17714166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
878-1144
               

               
Cow position:
               
chr21:20107160-20106893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 208
               

               
Conread position:
               
878-1153
               

               
Cow position:
               
chr21:17482349-17482620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
188, 204
               

               
Conread position:
               
878-1154
               

               
Cow position:
               
chr21:13704095-13703816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
878-1154
               

               
Cow position:
               
chr21:18934518-18934792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 33
               

               
Conread position:
               
878-1157
               

               
Cow position:
               
chr21:17417164-17416891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
878-1166
               

               
Cow position:
               
chr21:19974340-19974627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
185, 108
               

               
Conread position:
               
879-1044
               

               
Cow position:
               
chr21:21907988-21907823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
879-1061
               

               
Cow position:
               
chr21:23603735-23603916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
879-1075
               

               
Cow position:
               
chr21:28625700-28625895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
184, 38
               

               
Conread position:
               
879-1088
               

               
Cow position:
               
chr21:26681347-26681138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
183, 202
               

               
Conread position:
               
879-1091
               

               
Cow position:
               
chr21:39583889-39583681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
879-1093
               

               
Cow position:
               
chr21:3047255-3047469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
183, 203
               

               
Conread position:
               
879-1094
               

               
Cow position:
               
chr21:24418391-24418171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
879-1118
               

               
Cow position:
               
chr21:36982628-36982867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
879-1120
               

               
Cow position:
               
chr21:13897784-13898023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 204
               

               
Conread position:
               
879-1123
               

               
Cow position:
               
chr21:29999991-29999746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 207
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr21:3923832-3924078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr21:27287896-27288142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 201
               

               
Conread position:
               
879-1125
               

               
Cow position:
               
chr21:10854177-10854425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
879-1128
               

               
Cow position:
               
chr21:34909783-34910031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
879-1129
               

               
Cow position:
               
chr21:24698068-24698331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:12465941-12466198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 210
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:19237309-19237558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 204
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:22140751-22140496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 209
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:24082264-24082006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:25764226-25764476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
155, 88
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:29942587-29942849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr21:37352820-37352582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:4585756-4585509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:5566569-5566832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 220
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:9863033-9862782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:18979264-18979003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
184, 156
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:33997633-33997379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:45263430-45263179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 81
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr21:46973544-46973283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
879-1161
               

               
Cow position:
               
chr21:28512132-28512402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
880-1090
               

               
Cow position:
               
chr21:18846231-18846024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 124
               

               
Conread position:
               
880-1093
               

               
Cow position:
               
chr21:44861671-44861450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
5, 211
               

               
Conread position:
               
880-1124
               

               
Cow position:
               
chr21:40177976-40178226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 209
               

               
Conread position:
               
880-1131
               

               
Cow position:
               
chr21:25382590-25382852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
880-1134
               

               
Cow position:
               
chr21:12325633-12325882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
881-1063
               

               
Cow position:
               
chr21:28989205-28989394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
881-1131
               

               
Cow position:
               
chr21:42914150-42913903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
882-1124
               

               
Cow position:
               
chr21:27147630-27147388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
882-1124
               

               
Cow position:
               
chr21:33993472-33993226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
883-1123
               

               
Cow position:
               
chr21:23971241-23970996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
883-1130
               

               
Cow position:
               
chr21:10514407-10514649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 200
               

               
Conread position:
               
883-1131
               

               
Cow position:
               
chr21:23672347-23672586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
884-1082
               

               
Cow position:
               
chr21:39508040-39507846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
884-1120
               

               
Cow position:
               
chr21:36115929-36116162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr21:2938625-2938865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr21:24796441-24796202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 191
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr21:25480185-25480425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
884-1128
               

               
Cow position:
               
chr21:26969-27219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 196
               

               
Conread position:
               
884-1128
               

               
Cow position:
               
chr21:13159728-13159985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
884-1128
               

               
Cow position:
               
chr21:22856776-22857017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 63
               

               
Conread position:
               
884-1130
               

               
Cow position:
               
chr21:16695967-16696212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 20
               

               
Conread position:
               
884-1130
               

               
Cow position:
               
chr21:17219023-17218774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 161
               

               
Conread position:
               
884-1130
               

               
Cow position:
               
chr21:21170350-21170100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
884-1130
               

               
Cow position:
               
chr21:29704611-29704370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr21:6623745-6623985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr21:13728161-13727917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr21:48262726-48262974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
885-1043
               

               
Cow position:
               
chr21:14293771-14293613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
885-1090
               

               
Cow position:
               
chr21:4541276-4541067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
885-1100
               

               
Cow position:
               
chr21:297320-297531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
885-1114
               

               
Cow position:
               
chr21:16278308-16278537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
885-1120
               

               
Cow position:
               
chr21:5455393-5455150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
885-1125
               

               
Cow position:
               
chr21:4428276-4428525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
885-1130
               

               
Cow position:
               
chr21:19698962-19698725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
885-1131
               

               
Cow position:
               
chr21:25158491-25158732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
178, 9
               

               
Conread position:
               
885-1225
               

               
Cow position:
               
chr21:8451442-8451772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
178, 212
               

               
Conread position:
               
886-1079
               

               
Cow position:
               
chr21:13163522-13163703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 32
               

               
Conread position:
               
886-1124
               

               
Cow position:
               
chr21:17144746-17144984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 197
               

               
Conread position:
               
886-1124
               

               
Cow position:
               
chr21:23900208-23899971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
886-1124
               

               
Cow position:
               
chr21:37517766-37517529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
887-1090
               

               
Cow position:
               
chr21:37342257-37342057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
176, 90
               

               
Conread position:
               
887-1124
               

               
Cow position:
               
chr21:150075-150312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 196
               

               
Conread position:
               
887-1125
               

               
Cow position:
               
chr21:3818710-3818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
176, 105
               

               
Conread position:
               
887-1130
               

               
Cow position:
               
chr21:12338765-12339011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
84, 163
               

               
Conread position:
               
887-1131
               

               
Cow position:
               
chr21:24606995-24607228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
887-1131
               

               
Cow position:
               
chr21:25344475-25344720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 198
               

               
Conread position:
               
887-1131
               

               
Cow position:
               
chr21:36909420-36909669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 163
               

               
Conread position:
               
887-1132
               

               
Cow position:
               
chr21:13300751-13300996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
888-1131
               

               
Cow position:
               
chr21:33209799-33210041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 187
               

               
Conread position:
               
889-1120
               

               
Cow position:
               
chr21:2709959-2709728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
889-1120
               

               
Cow position:
               
chr21:39401195-39401432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
890-1079
               

               
Cow position:
               
chr21:44219831-44220027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
891-1131
               

               
Cow position:
               
chr21:27863917-27863677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 207
               

               
Conread position:
               
896-1045
               

               
Cow position:
               
chr21:18044172-18044023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
896-1075
               

               
Cow position:
               
chr21:28923750-28923930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
896-1105
               

               
Cow position:
               
chr21:18601270-18601477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
896-1124
               

               
Cow position:
               
chr21:443640-443866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
896-1129
               

               
Cow position:
               
chr21:10071321-10071088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
168, 189
               

               
Conread position:
               
896-1131
               

               
Cow position:
               
chr21:2366949-2367183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
896-1131
               

               
Cow position:
               
chr21:5153225-5153460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 187
               

               
Conread position:
               
898-1123
               

               
Cow position:
               
chr21:36680315-36680546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
899-1161
               

               
Cow position:
               
chr21:7582292-7582040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
900-1143
               

               
Cow position:
               
chr21:12616755-12616991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
900-1252
               

               
Cow position:
               
chr21:28908218-28907863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
903-1115
               

               
Cow position:
               
chr21:3467885-3468101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
904-1036
               

               
Cow position:
               
chr21:8896563-8896431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
904-1036
               

               
Cow position:
               
chr21:10664056-10664188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1087
               

               
Cow position:
               
chr21:13303146-13303328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
904-1087
               

               
Cow position:
               
chr21:46830530-46830343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
904-1093
               

               
Cow position:
               
chr21:37706801-37706614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
159, 126
               

               
Conread position:
               
904-1103
               

               
Cow position:
               
chr21:21076744-21076942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 142
               

               
Conread position:
               
904-1110
               

               
Cow position:
               
chr21:17479001-17479206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 89
               

               
Conread position:
               
904-1110
               

               
Cow position:
               
chr21:31276337-31276543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
904-1119
               

               
Cow position:
               
chr21:34337297-34337510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
904-1121
               

               
Cow position:
               
chr21:937668-937882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 172
               

               
Conread position:
               
904-1122
               

               
Cow position:
               
chr21:18932110-18932325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
904-1123
               

               
Cow position:
               
chr21:18494596-18494801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr21:30566648-30566855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
160, 51
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr21:30595134-30594916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
904-1125
               

               
Cow position:
               
chr21:25042105-25042326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
904-1125
               

               
Cow position:
               
chr21:29500523-29500743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr21:19766471-19766696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr21:30904985-30904763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 172
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr21:32191796-32192012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr21:14760194-14760423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr21:15976258-15976484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr21:40244050-40244277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 179
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr21:42500652-42500875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
159, 107
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr21:45866555-45866779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
904-1134
               

               
Cow position:
               
chr21:38867950-38867727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
904-1142
               

               
Cow position:
               
chr21:46462807-46463045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 75
               

               
Conread position:
               
904-1143
               

               
Cow position:
               
chr21:33263467-33263702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
160, 180
               

               
Conread position:
               
904-1143
               

               
Cow position:
               
chr21:35898005-35897774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
159, 169
               

               
Conread position:
               
904-1152
               

               
Cow position:
               
chr21:28881765-28882003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
158, 178
               

               
Conread position:
               
905-1128
               

               
Cow position:
               
chr21:37924129-37924353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
905-1129
               

               
Cow position:
               
chr21:44108638-44108848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
905-1130
               

               
Cow position:
               
chr21:8290026-8289799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
906-1121
               

               
Cow position:
               
chr21:39672292-39672507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
906-1124
               

               
Cow position:
               
chr21:39674957-39675176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
907-1074
               

               
Cow position:
               
chr21:28910083-28909916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 76
               

               
Conread position:
               
908-1040
               

               
Cow position:
               
chr21:35437728-35437598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
908-1105
               

               
Cow position:
               
chr21:26557438-26557241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
909-1131
               

               
Cow position:
               
chr21:16612250-16612472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 174
               

               
Conread position:
               
909-1131
               

               
Cow position:
               
chr21:45971530-45971315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
154, 6
               

               
Conread position:
               
912-1124
               

               
Cow position:
               
chr21:27500419-27500631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
913-1124
               

               
Cow position:
               
chr21:4898025-4897817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
913-1124
               

               
Cow position:
               
chr21:7815093-7814875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
913-1129
               

               
Cow position:
               
chr21:16789346-16789562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 169
               

               
Conread position:
               
913-1131
               

               
Cow position:
               
chr21:30232074-30231859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
914-1082
               

               
Cow position:
               
chr21:13159159-13159326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
914-1098
               

               
Cow position:
               
chr21:8071149-8070971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
914-1103
               

               
Cow position:
               
chr21:28810629-28810435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 167
               

               
Conread position:
               
915-1101
               

               
Cow position:
               
chr21:33154951-33155137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 168
               

               
Conread position:
               
915-1120
               

               
Cow position:
               
chr21:24864776-24864987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
915-1124
               

               
Cow position:
               
chr21:9743952-9743743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
915-1130
               

               
Cow position:
               
chr21:17262485-17262274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 130
               

               
Conread position:
               
915-1130
               

               
Cow position:
               
chr21:45916077-45915862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
149, 170
               

               
Conread position:
               
915-1143
               

               
Cow position:
               
chr21:4794848-4795077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
134, 169
               

               
Conread position:
               
916-1124
               

               
Cow position:
               
chr21:30688561-30688353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
917-1051
               

               
Cow position:
               
chr21:13315879-13316012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
917-1125
               

               
Cow position:
               
chr21:24136547-24136754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 166
               

               
Conread position:
               
917-1130
               

               
Cow position:
               
chr21:28429078-28429291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
918-1130
               

               
Cow position:
               
chr21:23984653-23984442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
918-1131
               

               
Cow position:
               
chr21:23821801-23822011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
919-1128
               

               
Cow position:
               
chr21:19668758-19668553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
919-1131
               

               
Cow position:
               
chr21:31158886-31159099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 122
               

               
Conread position:
               
919-1134
               

               
Cow position:
               
chr21:30626551-30626337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
920-1131
               

               
Cow position:
               
chr21:9415875-9416085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
143, 115
               

               
Conread position:
               
921-1115
               

               
Cow position:
               
chr21:14125695-14125890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 163
               

               
Conread position:
               
921-1124
               

               
Cow position:
               
chr21:40267195-40266992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 164
               

               
Conread position:
               
921-1124
               

               
Cow position:
               
chr21:45151998-45151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
922-1055
               

               
Cow position:
               
chr21:47168318-47168185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
922-1121
               

               
Cow position:
               
chr21:24236747-24236946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
922-1124
               

               
Cow position:
               
chr21:4569864-4569659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 161
               

               
Conread position:
               
922-1130
               

               
Cow position:
               
chr21:32574358-32574575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
924-1131
               

               
Cow position:
               
chr21:20162171-20162378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
139, 159
               

               
Conread position:
               
926-1129
               

               
Cow position:
               
chr21:17370245-17370043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 159
               

               
Conread position:
               
927-1040
               

               
Cow position:
               
chr21:49702615-49702502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
927-1094
               

               
Cow position:
               
chr21:23586502-23586670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 110
               

               
Conread position:
               
927-1105
               

               
Cow position:
               
chr21:42136205-42136034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
927-1112
               

               
Cow position:
               
chr21:14238193-14238378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
134, 156
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr21:5790864-5791061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr21:11024351-11024154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr21:33235437-33235634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr21:36973175-36972978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr21:38651282-38651085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 158
               

               
Conread position:
               
927-1128
               

               
Cow position:
               
chr21:16909694-16909899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
927-1129
               

               
Cow position:
               
chr21:10642240-10642438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
136, 110
               

               
Conread position:
               
927-1131
               

               
Cow position:
               
chr21:30990627-30990426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
927-1143
               

               
Cow position:
               
chr21:46777334-46777121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 158
               

               
Conread position:
               
928-1103
               

               
Cow position:
               
chr21:19363810-19363636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 155
               

               
Conread position:
               
928-1128
               

               
Cow position:
               
chr21:32190809-32191009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 155
               

               
Conread position:
               
928-1131
               

               
Cow position:
               
chr21:45474115-45473914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
143, 125
               

               
Conread position:
               
928-1150
               

               
Cow position:
               
chr21:4399440-4399658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 168
               

               
Conread position:
               
928-1154
               

               
Cow position:
               
chr21:21964671-21964896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
929-1124
               

               
Cow position:
               
chr21:42190517-42190328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
134, 104
               

               
Conread position:
               
929-1230
               

               
Cow position:
               
chr21:35899446-35899747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
931-1125
               

               
Cow position:
               
chr21:25193438-25193632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
132, 152
               

               
Conread position:
               
931-1128
               

               
Cow position:
               
chr21:2984148-2983950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
133, 155
               

               
Conread position:
               
931-1131
               

               
Cow position:
               
chr21:37479602-37479799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
932-1119
               

               
Cow position:
               
chr21:41032925-41033115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
932-1124
               

               
Cow position:
               
chr21:21963122-21963314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
933-1124
               

               
Cow position:
               
chr21:4665839-4665648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
933-1124
               

               
Cow position:
               
chr21:26071507-26071316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
933-1125
               

               
Cow position:
               
chr21:5344313-5344497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
935-1125
               

               
Cow position:
               
chr21:17439231-17439046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
935-1132
               

               
Cow position:
               
chr21:41974732-41974535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
936-1061
               

               
Cow position:
               
chr21:27124758-27124636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
936-1143
               

               
Cow position:
               
chr21:28029046-28029249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
937-1121
               

               
Cow position:
               
chr21:22349792-22349975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 106
               

               
Conread position:
               
937-1128
               

               
Cow position:
               
chr21:11759806-11759624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
938-1081
               

               
Cow position:
               
chr21:7067672-7067816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
939-1120
               

               
Cow position:
               
chr21:21961184-21961363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
939-1120
               

               
Cow position:
               
chr21:22310544-22310724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 98
               

               
Conread position:
               
940-1083
               

               
Cow position:
               
chr21:5137855-5137710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
942-1120
               

               
Cow position:
               
chr21:34955854-34956030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
943-1105
               

               
Cow position:
               
chr21:9011235-9011080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
944-1131
               

               
Cow position:
               
chr21:641243-641427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
946-1111
               

               
Cow position:
               
chr21:41281246-41281080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
946-1124
               

               
Cow position:
               
chr21:3364447-3364625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
946-1124
               

               
Cow position:
               
chr21:13930795-13930973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
946-1130
               

               
Cow position:
               
chr21:17616658-17616483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
947-1081
               

               
Cow position:
               
chr21:28955142-28955275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
949-1126
               

               
Cow position:
               
chr21:27065467-27065295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
949-1126
               

               
Cow position:
               
chr21:43402329-43402156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
951-1131
               

               
Cow position:
               
chr21:13048533-13048354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
952-1129
               

               
Cow position:
               
chr21:39061512-39061690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
952-1149
               

               
Cow position:
               
chr21:45250615-45250418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 148
               

               
Conread position:
               
955-1131
               

               
Cow position:
               
chr21:42384173-42384348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
955-1134
               

               
Cow position:
               
chr21:19196501-19196321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
956-1131
               

               
Cow position:
               
chr21:5392870-5392700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
956-1131
               

               
Cow position:
               
chr21:8985217-8985392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
957-1124
               

               
Cow position:
               
chr21:35823220-35823052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
958-1131
               

               
Cow position:
               
chr21:11740465-11740288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
958-1131
               

               
Cow position:
               
chr21:24857981-24858154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
105, 120
               

               
Conread position:
               
958-1134
               

               
Cow position:
               
chr21:20045098-20044925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
959-1128
               

               
Cow position:
               
chr21:20160355-20160523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 126
               

               
Conread position:
               
960-1124
               

               
Cow position:
               
chr21:13954184-13954349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
960-1131
               

               
Cow position:
               
chr21:38120775-38120950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 122
               

               
Conread position:
               
961-1092
               

               
Cow position:
               
chr21:8910366-8910235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr21:15905495-15905658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1125
               

               
Cow position:
               
chr21:10624199-10624035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
961-1130
               

               
Cow position:
               
chr21:42487209-42487378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 125
               

               
Conread position:
               
961-1131
               

               
Cow position:
               
chr21:7132788-7132620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
962-1122
               

               
Cow position:
               
chr21:47746001-47745839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
962-1124
               

               
Cow position:
               
chr21:1815286-1815125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
964-1094
               

               
Cow position:
               
chr21:11645309-11645177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
964-1130
               

               
Cow position:
               
chr21:703490-703325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
964-1131
               

               
Cow position:
               
chr21:17282379-17282546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
964-1131
               

               
Cow position:
               
chr21:18155690-18155856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
964-1131
               

               
Cow position:
               
chr21:40786347-40786513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
964-1134
               

               
Cow position:
               
chr21:47760453-47760624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
964-1230
               

               
Cow position:
               
chr21:42170306-42170572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
966-1131
               

               
Cow position:
               
chr21:42414421-42414260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
967-1124
               

               
Cow position:
               
chr21:45372034-45372191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
968-1094
               

               
Cow position:
               
chr21:27521713-27521585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
968-1111
               

               
Cow position:
               
chr21:39019939-39020083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 115
               

               
Conread position:
               
968-1130
               

               
Cow position:
               
chr21:10032037-10032199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 115
               

               
Conread position:
               
969-1131
               

               
Cow position:
               
chr21:46263858-46264019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
970-1131
               

               
Cow position:
               
chr21:6833734-6833895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 113
               

               
Conread position:
               
973-1105
               

               
Cow position:
               
chr21:34586729-34586596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
977-1125
               

               
Cow position:
               
chr21:18718358-18718505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
979-1094
               

               
Cow position:
               
chr21:8617928-8618046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
979-1105
               

               
Cow position:
               
chr21:14742941-14743067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
979-1105
               

               
Cow position:
               
chr21:17196817-17196692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
979-1113
               

               
Cow position:
               
chr21:45373798-45373932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1114
               

               
Cow position:
               
chr21:2663512-2663380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
979-1130
               

               
Cow position:
               
chr21:19614868-19615015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
979-1130
               

               
Cow position:
               
chr21:26097719-26097569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
979-1130
               

               
Cow position:
               
chr21:28993935-28993784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1130
               

               
Cow position:
               
chr21:31702265-31702114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:395569-395718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:426483-426632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:29225368-29225219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:31278473-31278622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:34010696-34010548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr21:36642598-36642750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
980-1131
               

               
Cow position:
               
chr21:40265525-40265676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr21:661914-661771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr21:32395988-32395846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr21:35068055-35068198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
982-1125
               

               
Cow position:
               
chr21:3987792-3987649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
82, 103
               

               
Conread position:
               
982-1130
               

               
Cow position:
               
chr21:11228260-11228112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
983-1105
               

               
Cow position:
               
chr21:14452521-14452643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
983-1124
               

               
Cow position:
               
chr21:39561292-39561433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
985-1124
               

               
Cow position:
               
chr21:5009480-5009341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
985-1128
               

               
Cow position:
               
chr21:40530605-40530467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
986-1124
               

               
Cow position:
               
chr21:19439162-19439299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
986-1131
               

               
Cow position:
               
chr21:36762747-36762896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
987-1124
               

               
Cow position:
               
chr21:19501724-19501861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
987-1129
               

               
Cow position:
               
chr21:7452425-7452287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr21:13168850-13168986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr21:25076688-25076552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
988-1130
               

               
Cow position:
               
chr21:11707050-11706910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
988-1131
               

               
Cow position:
               
chr21:43317582-43317434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
988-1179
               

               
Cow position:
               
chr21:18712986-18713174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
989-1124
               

               
Cow position:
               
chr21:19170209-19170078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
990-1134
               

               
Cow position:
               
chr21:27406502-27406362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
991-1130
               

               
Cow position:
               
chr21:43046608-43046471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
991-1131
               

               
Cow position:
               
chr21:47802559-47802417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
992-1124
               

               
Cow position:
               
chr21:40058509-40058642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
992-1131
               

               
Cow position:
               
chr21:28734209-28734069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
994-1124
               

               
Cow position:
               
chr21:2491084-2490954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
994-1131
               

               
Cow position:
               
chr21:13489349-13489485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
995-1123
               

               
Cow position:
               
chr21:10726988-10727116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
995-1124
               

               
Cow position:
               
chr21:25173576-25173706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
995-1129
               

               
Cow position:
               
chr21:32237007-32237137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
995-1230
               

               
Cow position:
               
chr21:11639728-11639959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
996-1125
               

               
Cow position:
               
chr21:2359600-2359729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
996-1128
               

               
Cow position:
               
chr21:25127318-25127448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
996-1129
               

               
Cow position:
               
chr21:2679267-2679393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
997-1125
               

               
Cow position:
               
chr21:5808712-5808584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
998-1125
               

               
Cow position:
               
chr21:697275-697151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
999-1125
               

               
Cow position:
               
chr21:41039929-41040055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
1002-1124
               

               
Cow position:
               
chr21:8888580-8888702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
1002-1124
               

               
Cow position:
               
chr21:20377648-20377530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1003-1124
               

               
Cow position:
               
chr21:1457906-1457785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
1004-1125
               

               
Cow position:
               
chr21:21600944-21600823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
1006-1131
               

               
Cow position:
               
chr21:29954709-29954585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
1006-1131
               

               
Cow position:
               
chr21:39889026-39888901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
1007-1124
               

               
Cow position:
               
chr21:33632730-33632613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
1007-1128
               

               
Cow position:
               
chr21:1529509-1529389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
1009-1124
               

               
Cow position:
               
chr21:39822089-39821974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
1010-1125
               

               
Cow position:
               
chr21:39313447-39313332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
1010-1129
               

               
Cow position:
               
chr21:17511501-17511617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1012-1124
               

               
Cow position:
               
chr21:35919312-35919424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
1015-1120
               

               
Cow position:
               
chr21:27336549-27336654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
1015-1124
               

               
Cow position:
               
chr21:43251850-43251741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
1015-1130
               

               
Cow position:
               
chr21:10966960-10967075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 68
               
Show alignments to all cow chromosomes.