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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8043P14.3
        

               
Conread position:
               
124-1124
               

               
Cow position:
               
chr5:52227448-52226448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1003
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
858, 848
               

               
Conread position:
               
419-1120
               

               
Cow position:
               
chr5:55653828-55654529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
563, 553
               

               
Conread position:
               
499-1124
               

               
Cow position:
               
chr5:11618969-11618344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
565, 586
               

               
Conread position:
               
554-1124
               

               
Cow position:
               
chr5:50675450-50674880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
428, 418
               

               
Conread position:
               
597-764
               

               
Cow position:
               
chr5:9090019-9090188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
734-1131
               

               
Cow position:
               
chr5:23856755-23856357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
329, 349
               

               
Conread position:
               
813-1124
               

               
Cow position:
               
chr5:14542964-14542655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 272
               

               
Conread position:
               
860-1125
               

               
Cow position:
               
chr5:10853279-10853015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 18
               

               
Conread position:
               
860-1125
               

               
Cow position:
               
chr5:43984639-43984906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 225
               

               
Conread position:
               
860-1129
               

               
Cow position:
               
chr5:29680619-29680881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
860-1131
               

               
Cow position:
               
chr5:37942255-37941988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 44
               

               
Conread position:
               
861-1120
               

               
Cow position:
               
chr5:9873795-9874056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
866-1093
               

               
Cow position:
               
chr5:34300435-34300660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
866-1128
               

               
Cow position:
               
chr5:36793573-36793838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
197, 23
               

               
Conread position:
               
871-1130
               

               
Cow position:
               
chr5:18127178-18127448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
873-1131
               

               
Cow position:
               
chr5:28456966-28456712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 212
               

               
Conread position:
               
873-1131
               

               
Cow position:
               
chr5:28460268-28460014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 212
               

               
Conread position:
               
874-1001
               

               
Cow position:
               
chr5:59564-59438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
874-1048
               

               
Cow position:
               
chr5:4348138-4347967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
874-1062
               

               
Cow position:
               
chr5:69460952-69461140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
874-1088
               

               
Cow position:
               
chr5:37432250-37432037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
874-1093
               

               
Cow position:
               
chr5:15455388-15455611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
874-1120
               

               
Cow position:
               
chr5:20408109-20407869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 10
               

               
Conread position:
               
874-1125
               

               
Cow position:
               
chr5:37288756-37289008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
874-1130
               

               
Cow position:
               
chr5:59505859-59505600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
874-1131
               

               
Cow position:
               
chr5:42667842-42667584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
189, 62
               

               
Conread position:
               
874-1131
               

               
Cow position:
               
chr5:70102256-70102004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
874-1132
               

               
Cow position:
               
chr5:56467254-56467506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
874-1157
               

               
Cow position:
               
chr5:61576068-61576367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
875-1111
               

               
Cow position:
               
chr5:11645244-11645487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 213
               

               
Conread position:
               
875-1125
               

               
Cow position:
               
chr5:26402276-26402019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 218
               

               
Conread position:
               
875-1131
               

               
Cow position:
               
chr5:47601360-47601621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 243
               

               
Conread position:
               
876-1051
               

               
Cow position:
               
chr5:68604335-68604510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
876-1078
               

               
Cow position:
               
chr5:6901198-6900989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
876-1089
               

               
Cow position:
               
chr5:9071250-9071037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
187, 66
               

               
Conread position:
               
876-1089
               

               
Cow position:
               
chr5:13045229-13045007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
876-1091
               

               
Cow position:
               
chr5:21784212-21783991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 213
               

               
Conread position:
               
876-1091
               

               
Cow position:
               
chr5:38379725-38379943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 140
               

               
Conread position:
               
876-1104
               

               
Cow position:
               
chr5:31784364-31784595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
876-1124
               

               
Cow position:
               
chr5:46653444-46653701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
876-1124
               

               
Cow position:
               
chr5:47750500-47750745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
187, 197
               

               
Conread position:
               
876-1126
               

               
Cow position:
               
chr5:49220922-49220672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
876-1131
               

               
Cow position:
               
chr5:64524331-64524075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 205
               

               
Conread position:
               
876-1150
               

               
Cow position:
               
chr5:35144893-35145173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 265
               

               
Conread position:
               
877-984
               

               
Cow position:
               
chr5:5849103-5848996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1003
               

               
Cow position:
               
chr5:1640299-1640173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1004
               

               
Cow position:
               
chr5:6773141-6773268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1017
               

               
Cow position:
               
chr5:50483362-50483222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1028
               

               
Cow position:
               
chr5:61147344-61147495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1033
               

               
Cow position:
               
chr5:54351600-54351444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1036
               

               
Cow position:
               
chr5:36832549-36832394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
877-1037
               

               
Cow position:
               
chr5:39216831-39216991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1037
               

               
Cow position:
               
chr5:59268995-59269156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
877-1041
               

               
Cow position:
               
chr5:27903973-27904140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 113
               

               
Conread position:
               
877-1041
               

               
Cow position:
               
chr5:32394163-32394327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1043
               

               
Cow position:
               
chr5:9390226-9390060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
877-1045
               

               
Cow position:
               
chr5:31217664-31217828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
877-1045
               

               
Cow position:
               
chr5:43350370-43350538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
877-1046
               

               
Cow position:
               
chr5:6576011-6575839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
877-1046
               

               
Cow position:
               
chr5:72309777-72309948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
877-1048
               

               
Cow position:
               
chr5:53776033-53776204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1049
               

               
Cow position:
               
chr5:34915690-34915512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
877-1053
               

               
Cow position:
               
chr5:24946950-24947132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
877-1059
               

               
Cow position:
               
chr5:23641445-23641252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
877-1060
               

               
Cow position:
               
chr5:40890010-40889827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr5:6286793-6286608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr5:7140531-7140348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr5:20779905-20779715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr5:64759180-64759001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
877-1061
               

               
Cow position:
               
chr5:69771727-69771918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
877-1063
               

               
Cow position:
               
chr5:3439763-3439571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
877-1063
               

               
Cow position:
               
chr5:11834604-11834417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1071
               

               
Cow position:
               
chr5:4682925-4682731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
877-1071
               

               
Cow position:
               
chr5:7066647-7066452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1072
               

               
Cow position:
               
chr5:18459419-18459217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr5:3442000-3442192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr5:12323244-12323045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
877-1074
               

               
Cow position:
               
chr5:53835246-53835443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
877-1075
               

               
Cow position:
               
chr5:1766744-1766546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
877-1075
               

               
Cow position:
               
chr5:50443118-50442917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
877-1078
               

               
Cow position:
               
chr5:63388299-63388501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1078
               

               
Cow position:
               
chr5:64823751-64823547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
877-1078
               

               
Cow position:
               
chr5:70249702-70249908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr5:8821436-8821239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr5:56433144-56433341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr5:57074765-57074563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
877-1079
               

               
Cow position:
               
chr5:72007325-72007122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
877-1080
               

               
Cow position:
               
chr5:14904505-14904301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1080
               

               
Cow position:
               
chr5:27615045-27615257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 179
               

               
Conread position:
               
877-1080
               

               
Cow position:
               
chr5:39419272-39419080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr5:4032460-4032251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
877-1081
               

               
Cow position:
               
chr5:37047481-37047692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:5826770-5826564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:6839597-6839385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:27172396-27172188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:27193500-27193294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:34669519-34669314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
186, 201
               

               
Conread position:
               
877-1082
               

               
Cow position:
               
chr5:40928458-40928246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
877-1083
               

               
Cow position:
               
chr5:62573644-62573851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 203
               

               
Conread position:
               
877-1084
               

               
Cow position:
               
chr5:25495835-25495626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
877-1088
               

               
Cow position:
               
chr5:3971098-3971307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
187, 55
               

               
Conread position:
               
877-1088
               

               
Cow position:
               
chr5:37436692-37436905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1089
               

               
Cow position:
               
chr5:7042165-7041955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1089
               

               
Cow position:
               
chr5:23745228-23745018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
186, 58
               

               
Conread position:
               
877-1090
               

               
Cow position:
               
chr5:2310030-2309818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 202
               

               
Conread position:
               
877-1090
               

               
Cow position:
               
chr5:7584999-7584781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
877-1090
               

               
Cow position:
               
chr5:7721806-7722033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 220
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:6032546-6032760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:16062259-16062048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 63
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:31661614-31661403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:31918182-31918387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:35262020-35262231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 162
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:35684260-35684462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:38431615-38431831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:45036330-45036550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:53764194-53763982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:58145083-58144874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
877-1091
               

               
Cow position:
               
chr5:72172578-72172800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 217
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:3058227-3058439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:17869001-17869213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:20808207-20808429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 212
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:22856791-22856569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:24643261-24643047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:28229677-28229896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:34232275-34232494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:48407035-48406811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:50064110-50064329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 142
               

               
Conread position:
               
877-1093
               

               
Cow position:
               
chr5:57941338-57941116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:1246791-1247011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:18902118-18902335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
187, 206
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:27305820-27306038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:29138515-29138738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:32088209-32087991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:33537281-33537493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:37377420-37377636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:54556750-54556975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:55195005-55195226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 95
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:63174167-63173947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 171
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:64176632-64176410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
877-1094
               

               
Cow position:
               
chr5:73525878-73526101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
877-1095
               

               
Cow position:
               
chr5:12563510-12563283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
98, 220
               

               
Conread position:
               
877-1095
               

               
Cow position:
               
chr5:26156417-26156199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1095
               

               
Cow position:
               
chr5:43991835-43992066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
877-1096
               

               
Cow position:
               
chr5:40891951-40891729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
877-1102
               

               
Cow position:
               
chr5:41363203-41362979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
877-1102
               

               
Cow position:
               
chr5:47719060-47719297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
877-1103
               

               
Cow position:
               
chr5:5337652-5337426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 220
               

               
Conread position:
               
877-1104
               

               
Cow position:
               
chr5:29750679-29750909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
877-1104
               

               
Cow position:
               
chr5:32070521-32070285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:5812533-5812308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:10065861-10065638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:32754859-32754633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:38883113-38882893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:49428745-49428511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
877-1105
               

               
Cow position:
               
chr5:51858734-51858500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
877-1106
               

               
Cow position:
               
chr5:3242908-3242683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
877-1107
               

               
Cow position:
               
chr5:58322157-58321930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
877-1108
               

               
Cow position:
               
chr5:48026843-48027074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
877-1110
               

               
Cow position:
               
chr5:60968000-60968228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
877-1111
               

               
Cow position:
               
chr5:6129907-6130141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1111
               

               
Cow position:
               
chr5:36867822-36868061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
877-1112
               

               
Cow position:
               
chr5:15882931-15882695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 214
               

               
Conread position:
               
877-1113
               

               
Cow position:
               
chr5:62272506-62272264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 212
               

               
Conread position:
               
877-1115
               

               
Cow position:
               
chr5:15722744-15722506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 205
               

               
Conread position:
               
877-1115
               

               
Cow position:
               
chr5:31645806-31646043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
877-1116
               

               
Cow position:
               
chr5:29660818-29660581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
877-1118
               

               
Cow position:
               
chr5:56820813-56821045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
877-1118
               

               
Cow position:
               
chr5:58245907-58246148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1119
               

               
Cow position:
               
chr5:59779607-59779365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 180
               

               
Conread position:
               
877-1119
               

               
Cow position:
               
chr5:59782208-59781966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 180
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:4015203-4014960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:9074182-9073940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:10260849-10260609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:10514695-10514940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:11631409-11631166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:17387044-17386800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 209
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:23777853-23778096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:29843858-29844104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:44276171-44276414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:46295121-46294871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:46732784-46732543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
187, 115
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:55756888-55756648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
877-1120
               

               
Cow position:
               
chr5:60376664-60376425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr5:408017-408261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr5:2330904-2330663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr5:5081033-5081277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr5:32809452-32809205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 222
               

               
Conread position:
               
877-1121
               

               
Cow position:
               
chr5:48718376-48718619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 54
               

               
Conread position:
               
877-1122
               

               
Cow position:
               
chr5:7175874-7176119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr5:279604-279358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 98
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr5:7192987-7193229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr5:37586491-37586245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 220
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr5:55723105-55723350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1123
               

               
Cow position:
               
chr5:74015494-74015737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:351282-351034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:360390-360144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:446070-446317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:709576-709328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:825784-826031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:1058991-1058743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:1383549-1383800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:2428172-2427929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:3066092-3065845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:3229187-3228940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:3696519-3696761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 150
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:4041713-4041960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:4716186-4715939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:4753558-4753311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:5814524-5814277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6060056-6059809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6124587-6124340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6455087-6454841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6616118-6616365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6694430-6694183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:6735213-6734966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:7007228-7006981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:9056408-9056161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:9165082-9164833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10250697-10250450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10283697-10283944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10299923-10300170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10417772-10417525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10479068-10478821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:10772254-10772007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:11986608-11986361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:11988906-11988659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:12324999-12324751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:13127952-13127705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:13271089-13271336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:14636003-14635757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:15112679-15112432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:15530307-15530061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 198
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:17027640-17027896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 215
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:17982837-17982590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:18072340-18072094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:18118399-18118153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:18287218-18287464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 138
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:19283927-19283687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:19890641-19890888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:19978333-19978088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 115
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:20107456-20107211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:23354287-23354533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:23881755-23881508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:24086126-24085880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:24633650-24633897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:25926861-25926613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:26053307-26053554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:26075117-26074871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:26505852-26505608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:27046483-27046730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:27461494-27461247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:27548938-27548696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
100, 188
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:28013433-28013680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29223606-29223841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29255638-29255391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
189, 209
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29633408-29633161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29635005-29635252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29741982-29741738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:29893538-29893785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:30259155-30258908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:31285433-31285680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:31686949-31687196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:31709867-31710115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:33077521-33077768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:33870267-33870020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:34480419-34480172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:34583740-34583493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:34682787-34682542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:34709343-34709590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:35455570-35455323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:35498083-35498330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:35543235-35543482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:36369416-36369169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:37380660-37380908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:37430940-37430693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:37609433-37609186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:37626422-37626669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:37782559-37782316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:38439407-38439654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:38663297-38663543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:38831439-38831196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:39363448-39363690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:40116202-40115955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:41067575-41067821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:41331912-41332159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:41586850-41587097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:42283739-42283986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:42871393-42871640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:43031363-43031123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
187, 81
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:43395868-43396115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:45025592-45025338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:45179273-45179026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46235257-46235008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46587489-46587242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46628255-46628502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46667647-46667888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46780086-46780332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46816528-46816289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
187, 12
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:46845497-46845250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:47055373-47055126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:47343450-47343697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:47564741-47564494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:47590019-47589773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:47959417-47959665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:49103400-49103648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:49239808-49240055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:49522277-49522526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 208
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:49970402-49970155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:50622670-50622423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:51165735-51165488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:51746794-51747039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:52239691-52239444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:53075294-53075047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:54679008-54678761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:54927350-54927104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 70
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:54929678-54929436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:54951541-54951295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 70
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:55233218-55232981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:56271560-56271313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:56442833-56443075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:56931315-56931065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 240
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:57335788-57335541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:57584568-57584828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 250
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:57879443-57879690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:57987068-57987301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:58202109-58202355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:58323744-58323991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:58770296-58770052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:58796091-58795843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:59065019-59065267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:59147183-59147429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:59518440-59518193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:60897293-60897047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:61763190-61762943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:63647916-63647669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 101
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:65053245-65053499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:68273273-68273026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:68377167-68377414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:72857452-72857700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
877-1124
               

               
Cow position:
               
chr5:76097913-76097667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 100
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:1338348-1338104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:3500556-3500299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
187, 202
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:4071423-4071672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:5924407-5924159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:7397097-7397345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:7498409-7498161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:8178733-8178977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:9001787-9001548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
187, 78
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:15677632-15677884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:18557842-18557594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:21189793-21190041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:24087474-24087235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:29969184-29969432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 205
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:30582901-30583150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:31119621-31119373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:34612349-34612597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:36724168-36723920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:41547454-41547208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:43437368-43437118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:47559985-47559737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 208
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:49116778-49116537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
186, 116
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:50981917-50982164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:51936712-51936955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 202
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:52822633-52822385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:53005683-53005436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:53184928-53184676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 213
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:53381129-53381377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:59339369-59339617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:61055078-61054831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 117
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:62427816-62428064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:64061903-64062151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:70593427-70593181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 40
               

               
Conread position:
               
877-1125
               

               
Cow position:
               
chr5:75754548-75754299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
877-1126
               

               
Cow position:
               
chr5:4962811-4962567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
877-1126
               

               
Cow position:
               
chr5:21188507-21188756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
877-1126
               

               
Cow position:
               
chr5:51683692-51683445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
877-1126
               

               
Cow position:
               
chr5:64778430-64778181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1127
               

               
Cow position:
               
chr5:5193962-5194216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 215
               

               
Conread position:
               
877-1127
               

               
Cow position:
               
chr5:39299078-39299328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:2977363-2977633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:12640678-12640428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:31730746-31730988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
192, 36
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:50645901-50645650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 208
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:54868968-54869219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 206
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:62436695-62436949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 210
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:70290035-70290287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
877-1128
               

               
Cow position:
               
chr5:70960597-70960346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:14833059-14832805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 212
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:16184643-16184892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 210
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:37645617-37645876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 7
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:39334007-39333755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:40711905-40711641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 252
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:46080708-46080454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:54714191-54713935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1129
               

               
Cow position:
               
chr5:74644109-74643859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:3281316-3281065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 117
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:3695940-3696199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 186
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:4630668-4630931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 210
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:8819778-8819523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:11954747-11954495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:11955942-11955680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:19817255-19817001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:21184784-21184522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:25928139-25927888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 191
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:26561696-26561957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:28330772-28330528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 48
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:28650809-28651051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
189, 17
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:30347406-30347157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:31097251-31097000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:33087768-33088028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:34638444-34638689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:34678446-34678695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:35988867-35989119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:37758266-37758000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:44380017-44380282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 252
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:49127283-49127554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:49912598-49912854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:51151810-51151559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 54
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:51293186-51292924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 257
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:51819078-51819344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:51951902-51952161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:52289332-52289577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
186, 159
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:52830998-52831246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 208
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:57365522-57365271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 192
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:60447798-60448049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:63608016-63607758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 213
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:64844567-64844314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:69466652-69466903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 206
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:70608542-70608801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
877-1130
               

               
Cow position:
               
chr5:72902101-72902362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:1105309-1105066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:1677335-1677082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:3204391-3204640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:3639975-3639709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:4166223-4166476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 95
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:6044837-6045092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:12315872-12316119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 22
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:15363445-15363695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:16508637-16508900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:16894218-16893971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
183, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:17384549-17384296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
185, 30
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:17645336-17645088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:18573721-18573975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:18702651-18702408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:19969481-19969227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:21828407-21828669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:26096847-26097100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:26467173-26467425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
186, 204
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:27403689-27403439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:28224013-28224259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:28247728-28247981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:29903971-29903717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:30816265-30816520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 207
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:31145225-31144971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:31470023-31469778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
186, 156
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:34506375-34506121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:35207812-35208066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 210
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:35826151-35826395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 153
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:39447983-39447726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:40058129-40058381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 138
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:41392296-41392550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:41546340-41546089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:41976292-41976040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 149
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:41980953-41981206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 114
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:43923598-43923345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:44054483-44054233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:44752768-44752506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 254
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:44848463-44848212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 142
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:46104396-46104131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 212
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:47704584-47704330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:48828696-48828953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 208
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:49820693-49820947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:50637389-50637634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:52165628-52165378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:53855260-53855509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:54126634-54126884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 128
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:54405344-54405091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 207
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:55176437-55176691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 212
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:55942846-55942593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
165, 86
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:58460854-58460600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:58855656-58855908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:59873973-59873724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:62827203-62826949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 117
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:64321306-64321553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:65593424-65593684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 240
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:65776845-65776581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:66257199-66257447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 95
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:66366085-66366335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 75
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:66816029-66815771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 56
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr5:75756169-75756429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
186, 157
               

               
Conread position:
               
877-1132
               

               
Cow position:
               
chr5:34115193-34115468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
877-1132
               

               
Cow position:
               
chr5:64615563-64615824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr5:30302449-30302706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr5:34464033-34463778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 131
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr5:59082641-59082385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
877-1134
               

               
Cow position:
               
chr5:65312526-65312780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 42
               

               
Conread position:
               
877-1135
               

               
Cow position:
               
chr5:55684676-55684938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
877-1136
               

               
Cow position:
               
chr5:31635000-31635260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 112
               

               
Conread position:
               
877-1138
               

               
Cow position:
               
chr5:30486804-30487060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 42
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr5:26378117-26377853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr5:34528129-34528375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr5:39242794-39242526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr5:46130232-46129967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
877-1143
               

               
Cow position:
               
chr5:72046093-72045827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
162, 95
               

               
Conread position:
               
877-1145
               

               
Cow position:
               
chr5:16206591-16206327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1145
               

               
Cow position:
               
chr5:27010840-27011110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 211
               

               
Conread position:
               
877-1148
               

               
Cow position:
               
chr5:15472674-15472403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
877-1160
               

               
Cow position:
               
chr5:42673645-42673926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
877-1161
               

               
Cow position:
               
chr5:47871494-47871219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 81
               

               
Conread position:
               
877-1164
               

               
Cow position:
               
chr5:15478660-15478948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
186, 136
               

               
Conread position:
               
877-1210
               

               
Cow position:
               
chr5:58004796-58005126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 160
               

               
Conread position:
               
877-1211
               

               
Cow position:
               
chr5:45846141-45845818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
877-1220
               

               
Cow position:
               
chr5:14630357-14630017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 199
               

               
Conread position:
               
877-1220
               

               
Cow position:
               
chr5:54337474-54337809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 206
               

               
Conread position:
               
877-1224
               

               
Cow position:
               
chr5:27690515-27690166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 124
               

               
Conread position:
               
877-1229
               

               
Cow position:
               
chr5:1394875-1394529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
877-1229
               

               
Cow position:
               
chr5:59877187-59876835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 208
               

               
Conread position:
               
877-1230
               

               
Cow position:
               
chr5:46023630-46023280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
877-1230
               

               
Cow position:
               
chr5:46708734-46709083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
877-1230
               

               
Cow position:
               
chr5:47756316-47756671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 212
               

               
Conread position:
               
877-1233
               

               
Cow position:
               
chr5:694126-694488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 251
               

               
Conread position:
               
877-1237
               

               
Cow position:
               
chr5:5106798-5107156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
878-1028
               

               
Cow position:
               
chr5:24299868-24300018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
878-1082
               

               
Cow position:
               
chr5:32697233-32697040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 54
               

               
Conread position:
               
878-1084
               

               
Cow position:
               
chr5:73089194-73088989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
185, 99
               

               
Conread position:
               
878-1093
               

               
Cow position:
               
chr5:36406721-36406945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 183
               

               
Conread position:
               
878-1103
               

               
Cow position:
               
chr5:55820930-55821161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 146
               

               
Conread position:
               
878-1110
               

               
Cow position:
               
chr5:30276254-30276479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
185, 77
               

               
Conread position:
               
878-1119
               

               
Cow position:
               
chr5:54089261-54089512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
878-1122
               

               
Cow position:
               
chr5:27100827-27101078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 228
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr5:3544872-3545118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 205
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr5:4600176-4599934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
878-1124
               

               
Cow position:
               
chr5:13453665-13453419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
878-1129
               

               
Cow position:
               
chr5:31480705-31480957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 205
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr5:21137721-21137459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 142
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr5:33189776-33190032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr5:40270179-40269925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr5:70631424-70631172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr5:7740773-7740502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 265
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr5:27154576-27154827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr5:27179211-27179459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
194, 170
               

               
Conread position:
               
878-1131
               

               
Cow position:
               
chr5:35762844-35763095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 6
               

               
Conread position:
               
878-1149
               

               
Cow position:
               
chr5:12873301-12873565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
878-1226
               

               
Cow position:
               
chr5:45999471-45999126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
879-1025
               

               
Cow position:
               
chr5:42676822-42676969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
879-1058
               

               
Cow position:
               
chr5:12352513-12352332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
879-1071
               

               
Cow position:
               
chr5:40977579-40977775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
879-1074
               

               
Cow position:
               
chr5:2500640-2500444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
879-1075
               

               
Cow position:
               
chr5:44660174-44660376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 173
               

               
Conread position:
               
879-1075
               

               
Cow position:
               
chr5:49239339-49239147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
879-1078
               

               
Cow position:
               
chr5:63456995-63456796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
879-1081
               

               
Cow position:
               
chr5:56927324-56927534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 175
               

               
Conread position:
               
879-1084
               

               
Cow position:
               
chr5:29755853-29756067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
879-1090
               

               
Cow position:
               
chr5:35967754-35967973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
879-1093
               

               
Cow position:
               
chr5:6670603-6670387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
879-1093
               

               
Cow position:
               
chr5:52437660-52437878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 205
               

               
Conread position:
               
879-1093
               

               
Cow position:
               
chr5:57772079-57771864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 207
               

               
Conread position:
               
879-1094
               

               
Cow position:
               
chr5:34923572-34923357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 204
               

               
Conread position:
               
879-1095
               

               
Cow position:
               
chr5:29559884-29560104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 210
               

               
Conread position:
               
879-1105
               

               
Cow position:
               
chr5:46339686-46339907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr5:6584950-6584707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr5:48374241-48374486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr5:51309521-51309765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr5:58441094-58441338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr5:72314901-72314658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
185, 94
               

               
Conread position:
               
879-1125
               

               
Cow position:
               
chr5:26101297-26101543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 204
               

               
Conread position:
               
879-1125
               

               
Cow position:
               
chr5:37190535-37190297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
879-1128
               

               
Cow position:
               
chr5:2262818-2262572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
185, 87
               

               
Conread position:
               
879-1128
               

               
Cow position:
               
chr5:13909053-13908809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 85
               

               
Conread position:
               
879-1128
               

               
Cow position:
               
chr5:67462533-67462775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
879-1129
               

               
Cow position:
               
chr5:19780455-19780207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 195
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:674959-675208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:15088738-15088990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 208
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:24925388-24925636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:25930337-25930085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:33270025-33270276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:41410867-41410616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 206
               

               
Conread position:
               
879-1130
               

               
Cow position:
               
chr5:41520000-41519751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:6087011-6086757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:17087468-17087224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 40
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:21943930-21944186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 208
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:24348677-24348916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:29827606-29827858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 204
               

               
Conread position:
               
879-1131
               

               
Cow position:
               
chr5:40532087-40531830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 100
               

               
Conread position:
               
879-1132
               

               
Cow position:
               
chr5:7921835-7921573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
879-1132
               

               
Cow position:
               
chr5:18478977-18479240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
879-1132
               

               
Cow position:
               
chr5:67932916-67932656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
879-1167
               

               
Cow position:
               
chr5:25231455-25231173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
880-1074
               

               
Cow position:
               
chr5:19813667-19813471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
880-1075
               

               
Cow position:
               
chr5:60186401-60186600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
880-1076
               

               
Cow position:
               
chr5:24837485-24837289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
880-1082
               

               
Cow position:
               
chr5:3582131-3582336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
880-1091
               

               
Cow position:
               
chr5:59508878-59509092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 168
               

               
Conread position:
               
880-1093
               

               
Cow position:
               
chr5:32815431-32815650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
880-1093
               

               
Cow position:
               
chr5:33266102-33265885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 207
               

               
Conread position:
               
880-1093
               

               
Cow position:
               
chr5:47082705-47082920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
880-1093
               

               
Cow position:
               
chr5:68480753-68480977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
880-1104
               

               
Cow position:
               
chr5:46797788-46798005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
880-1128
               

               
Cow position:
               
chr5:75185141-75184893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
880-1129
               

               
Cow position:
               
chr5:30359703-30359453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
880-1130
               

               
Cow position:
               
chr5:15598679-15598430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 168
               

               
Conread position:
               
880-1130
               

               
Cow position:
               
chr5:22770011-22770268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 200
               

               
Conread position:
               
880-1132
               

               
Cow position:
               
chr5:48244635-48244888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
880-1143
               

               
Cow position:
               
chr5:46510313-46510053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
880-1150
               

               
Cow position:
               
chr5:38286648-38286923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 260
               

               
Conread position:
               
881-1084
               

               
Cow position:
               
chr5:26045849-26046058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
881-1119
               

               
Cow position:
               
chr5:9676052-9675801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 215
               

               
Conread position:
               
881-1119
               

               
Cow position:
               
chr5:50599626-50599859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
881-1127
               

               
Cow position:
               
chr5:21555512-21555261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 222
               

               
Conread position:
               
881-1129
               

               
Cow position:
               
chr5:52610964-52610712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
883-1128
               

               
Cow position:
               
chr5:4353566-4353817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
884-1036
               

               
Cow position:
               
chr5:17424963-17424815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
884-1053
               

               
Cow position:
               
chr5:52040752-52040583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
884-1061
               

               
Cow position:
               
chr5:25935184-25935368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
884-1082
               

               
Cow position:
               
chr5:60752534-60752331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
884-1094
               

               
Cow position:
               
chr5:34885849-34885643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
884-1120
               

               
Cow position:
               
chr5:59758952-59759184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
884-1122
               

               
Cow position:
               
chr5:26094612-26094375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
162, 214
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr5:10482814-10482574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr5:11780285-11780045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 201
               

               
Conread position:
               
884-1124
               

               
Cow position:
               
chr5:19470619-19470385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
884-1125
               

               
Cow position:
               
chr5:12134164-12134405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
884-1125
               

               
Cow position:
               
chr5:48804864-48804623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 200
               

               
Conread position:
               
884-1128
               

               
Cow position:
               
chr5:68461165-68460935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:12557848-12557603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:14551020-14550781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:41951522-41951280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:45705589-45705852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
102, 215
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:50821347-50821593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr5:65933375-65933123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 204
               

               
Conread position:
               
884-1143
               

               
Cow position:
               
chr5:14314081-14314335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 160
               

               
Conread position:
               
884-1234
               

               
Cow position:
               
chr5:21617023-21617361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
179, 145
               

               
Conread position:
               
885-1082
               

               
Cow position:
               
chr5:42727232-42727035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
178, 118
               

               
Conread position:
               
885-1096
               

               
Cow position:
               
chr5:32140520-32140308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
885-1121
               

               
Cow position:
               
chr5:15760809-15760569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 204
               

               
Conread position:
               
885-1124
               

               
Cow position:
               
chr5:442730-442492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
885-1124
               

               
Cow position:
               
chr5:13807178-13806939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
885-1129
               

               
Cow position:
               
chr5:73070007-73070250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 19
               

               
Conread position:
               
885-1131
               

               
Cow position:
               
chr5:5937883-5938129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 198
               

               
Conread position:
               
885-1131
               

               
Cow position:
               
chr5:34192505-34192750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 185
               

               
Conread position:
               
885-1131
               

               
Cow position:
               
chr5:41936229-41935994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 28
               

               
Conread position:
               
885-1137
               

               
Cow position:
               
chr5:41953253-41952993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 220
               

               
Conread position:
               
885-1157
               

               
Cow position:
               
chr5:4218442-4218705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
178, 107
               

               
Conread position:
               
885-1157
               

               
Cow position:
               
chr5:48542741-48542469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
885-1234
               

               
Cow position:
               
chr5:14141248-14141593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 50
               

               
Conread position:
               
886-1040
               

               
Cow position:
               
chr5:73485303-73485150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
886-1106
               

               
Cow position:
               
chr5:51999745-51999972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
886-1124
               

               
Cow position:
               
chr5:26647277-26647516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
886-1124
               

               
Cow position:
               
chr5:48972151-48972389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 197
               

               
Conread position:
               
886-1125
               

               
Cow position:
               
chr5:411135-410896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 199
               

               
Conread position:
               
886-1125
               

               
Cow position:
               
chr5:55631649-55631888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 197
               

               
Conread position:
               
886-1128
               

               
Cow position:
               
chr5:37736246-37736487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
886-1134
               

               
Cow position:
               
chr5:26790884-26790641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 187
               

               
Conread position:
               
887-1104
               

               
Cow position:
               
chr5:29771082-29771296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
887-1132
               

               
Cow position:
               
chr5:10261682-10261433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 231
               

               
Conread position:
               
887-1134
               

               
Cow position:
               
chr5:49558723-49558967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
888-1102
               

               
Cow position:
               
chr5:40595464-40595252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
175, 79
               

               
Conread position:
               
888-1105
               

               
Cow position:
               
chr5:24102290-24102507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
888-1120
               

               
Cow position:
               
chr5:7581314-7581076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
888-1143
               

               
Cow position:
               
chr5:57935543-57935300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
889-1035
               

               
Cow position:
               
chr5:22311829-22311975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
889-1090
               

               
Cow position:
               
chr5:69337377-69337577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
189, 154
               

               
Conread position:
               
889-1211
               

               
Cow position:
               
chr5:3789811-3790126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 190
               

               
Conread position:
               
891-1100
               

               
Cow position:
               
chr5:63635618-63635832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
892-1107
               

               
Cow position:
               
chr5:38818925-38818710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
892-1124
               

               
Cow position:
               
chr5:56879505-56879737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 191
               

               
Conread position:
               
894-1124
               

               
Cow position:
               
chr5:2279183-2278953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
895-1055
               

               
Cow position:
               
chr5:65600998-65601155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
896-1061
               

               
Cow position:
               
chr5:24996883-24996719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
896-1127
               

               
Cow position:
               
chr5:60669462-60669695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
896-1131
               

               
Cow position:
               
chr5:40672947-40673189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
896-1134
               

               
Cow position:
               
chr5:27015263-27015499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 132
               

               
Conread position:
               
896-1134
               

               
Cow position:
               
chr5:41523217-41522985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
167, 74
               

               
Conread position:
               
901-1131
               

               
Cow position:
               
chr5:55068297-55068522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 93
               

               
Conread position:
               
902-1124
               

               
Cow position:
               
chr5:23957204-23956984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 6
               

               
Conread position:
               
904-1087
               

               
Cow position:
               
chr5:28323766-28323952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
904-1087
               

               
Cow position:
               
chr5:32378447-32378634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
904-1090
               

               
Cow position:
               
chr5:7277489-7277675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 179
               

               
Conread position:
               
904-1123
               

               
Cow position:
               
chr5:57002842-57002623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:1054764-1054545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
159, 116
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:11763412-11763632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:24614024-24614249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:30274487-30274267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:42508044-42508264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:55685140-55685360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:59135022-59135242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:59450360-59450139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1124
               

               
Cow position:
               
chr5:74550046-74550266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 181
               

               
Conread position:
               
904-1125
               

               
Cow position:
               
chr5:16085218-16085001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
904-1127
               

               
Cow position:
               
chr5:21550310-21550082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
904-1129
               

               
Cow position:
               
chr5:30977948-30978188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 190
               

               
Conread position:
               
904-1129
               

               
Cow position:
               
chr5:59303695-59303466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr5:19300198-19299976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr5:28946485-28946255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
904-1130
               

               
Cow position:
               
chr5:29675880-29676103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr5:2332946-2332709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr5:6528259-6528485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 89
               

               
Conread position:
               
904-1131
               

               
Cow position:
               
chr5:14420767-14420540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 181
               

               
Conread position:
               
904-1132
               

               
Cow position:
               
chr5:8986347-8986123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
904-1139
               

               
Cow position:
               
chr5:59473046-59473281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
904-1143
               

               
Cow position:
               
chr5:12672447-12672213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
66, 182
               

               
Conread position:
               
904-1143
               

               
Cow position:
               
chr5:58519822-58519585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 182
               

               
Conread position:
               
904-1150
               

               
Cow position:
               
chr5:26133496-26133253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
160, 181
               

               
Conread position:
               
904-1188
               

               
Cow position:
               
chr5:41604184-41604470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 197
               

               
Conread position:
               
904-1218
               

               
Cow position:
               
chr5:29504680-29504994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
905-1105
               

               
Cow position:
               
chr5:62377969-62378167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
905-1123
               

               
Cow position:
               
chr5:9385408-9385193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
158, 167
               

               
Conread position:
               
905-1125
               

               
Cow position:
               
chr5:13328348-13328560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
906-1078
               

               
Cow position:
               
chr5:31433853-31434030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
906-1124
               

               
Cow position:
               
chr5:1163616-1163821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
906-1134
               

               
Cow position:
               
chr5:33414825-33414597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 177
               

               
Conread position:
               
906-1207
               

               
Cow position:
               
chr5:56523754-56524051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 177
               

               
Conread position:
               
907-1084
               

               
Cow position:
               
chr5:68871740-68871918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
907-1091
               

               
Cow position:
               
chr5:68846959-68846774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
907-1097
               

               
Cow position:
               
chr5:51502470-51502669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
907-1106
               

               
Cow position:
               
chr5:34888282-34888077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
907-1130
               

               
Cow position:
               
chr5:765304-765526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
156, 99
               

               
Conread position:
               
907-1131
               

               
Cow position:
               
chr5:23912470-23912694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
156, 176
               

               
Conread position:
               
907-1131
               

               
Cow position:
               
chr5:48224994-48224771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
908-1079
               

               
Cow position:
               
chr5:3627778-3627614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
908-1124
               

               
Cow position:
               
chr5:48227400-48227616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
908-1130
               

               
Cow position:
               
chr5:22737690-22737909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
908-1136
               

               
Cow position:
               
chr5:62268160-62268395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
908-1230
               

               
Cow position:
               
chr5:47889133-47888812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 175
               

               
Conread position:
               
909-1081
               

               
Cow position:
               
chr5:15425829-15426002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 5
               

               
Conread position:
               
909-1105
               

               
Cow position:
               
chr5:48938087-48937892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
909-1132
               

               
Cow position:
               
chr5:28930957-28931179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
909-1134
               

               
Cow position:
               
chr5:61839771-61839997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
910-1081
               

               
Cow position:
               
chr5:43930183-43930015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
910-1149
               

               
Cow position:
               
chr5:65887430-65887194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
912-1129
               

               
Cow position:
               
chr5:53002012-53001797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
912-1131
               

               
Cow position:
               
chr5:21524751-21524969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 116
               

               
Conread position:
               
913-1082
               

               
Cow position:
               
chr5:28854323-28854152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
913-1105
               

               
Cow position:
               
chr5:3966923-3967116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
913-1105
               

               
Cow position:
               
chr5:9024694-9024504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
913-1118
               

               
Cow position:
               
chr5:19389391-19389601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
913-1121
               

               
Cow position:
               
chr5:64122464-64122244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
913-1122
               

               
Cow position:
               
chr5:30176594-30176384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 185
               

               
Conread position:
               
913-1124
               

               
Cow position:
               
chr5:4434045-4433833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
913-1124
               

               
Cow position:
               
chr5:19020631-19020422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
151, 64
               

               
Conread position:
               
913-1124
               

               
Cow position:
               
chr5:58329643-58329854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
913-1126
               

               
Cow position:
               
chr5:20411051-20410838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 172
               

               
Conread position:
               
913-1128
               

               
Cow position:
               
chr5:41532588-41532369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
150, 102
               

               
Conread position:
               
913-1130
               

               
Cow position:
               
chr5:42096209-42096425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
915-1080
               

               
Cow position:
               
chr5:5855377-5855543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
915-1093
               

               
Cow position:
               
chr5:57271848-57271662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
915-1104
               

               
Cow position:
               
chr5:26595608-26595412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
915-1124
               

               
Cow position:
               
chr5:4571157-4571367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
915-1124
               

               
Cow position:
               
chr5:20270369-20270578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
915-1130
               

               
Cow position:
               
chr5:28374754-28374537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
915-1131
               

               
Cow position:
               
chr5:24919288-24919072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 170
               

               
Conread position:
               
915-1131
               

               
Cow position:
               
chr5:24933777-24934011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
915-1131
               

               
Cow position:
               
chr5:39094142-39094358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 93
               

               
Conread position:
               
916-1130
               

               
Cow position:
               
chr5:31053011-31053225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 167
               

               
Conread position:
               
916-1130
               

               
Cow position:
               
chr5:69520219-69520419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
917-1094
               

               
Cow position:
               
chr5:10248313-10248484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
917-1105
               

               
Cow position:
               
chr5:33820919-33820731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
147, 168
               

               
Conread position:
               
917-1124
               

               
Cow position:
               
chr5:1690502-1690709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
917-1125
               

               
Cow position:
               
chr5:4388944-4389151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 166
               

               
Conread position:
               
917-1129
               

               
Cow position:
               
chr5:51761586-51761367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
918-1124
               

               
Cow position:
               
chr5:10838490-10838284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
918-1124
               

               
Cow position:
               
chr5:41370926-41371132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
919-1123
               

               
Cow position:
               
chr5:74162104-74161901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
144, 156
               

               
Conread position:
               
919-1124
               

               
Cow position:
               
chr5:40864617-40864822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
920-1079
               

               
Cow position:
               
chr5:5879722-5879563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
921-1093
               

               
Cow position:
               
chr5:1460854-1460683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
921-1128
               

               
Cow position:
               
chr5:22071668-22071888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
921-1131
               

               
Cow position:
               
chr5:21040379-21040169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
922-1061
               

               
Cow position:
               
chr5:57889316-57889455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
922-1082
               

               
Cow position:
               
chr5:47629277-47629117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 130
               

               
Conread position:
               
922-1124
               

               
Cow position:
               
chr5:42769402-42769200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
922-1124
               

               
Cow position:
               
chr5:54360577-54360375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
922-1131
               

               
Cow position:
               
chr5:14415368-14415577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
922-1131
               

               
Cow position:
               
chr5:61030639-61030424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 181
               

               
Conread position:
               
922-1143
               

               
Cow position:
               
chr5:59114502-59114721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
924-1130
               

               
Cow position:
               
chr5:6986755-6986962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 160
               

               
Conread position:
               
924-1130
               

               
Cow position:
               
chr5:31103895-31104106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
925-1125
               

               
Cow position:
               
chr5:10922783-10922979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
926-1146
               

               
Cow position:
               
chr5:44583514-44583302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
927-1021
               

               
Cow position:
               
chr5:54753322-54753416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
927-1091
               

               
Cow position:
               
chr5:14557626-14557461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
927-1093
               

               
Cow position:
               
chr5:33977267-33977433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr5:247929-248126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr5:30158023-30158220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr5:37801327-37801524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr5:38838666-38838469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 158
               

               
Conread position:
               
927-1124
               

               
Cow position:
               
chr5:50979405-50979601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
927-1125
               

               
Cow position:
               
chr5:44369494-44369693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
927-1125
               

               
Cow position:
               
chr5:55428157-55428355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
927-1129
               

               
Cow position:
               
chr5:41531489-41531285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 157
               

               
Conread position:
               
927-1130
               

               
Cow position:
               
chr5:42777375-42777568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
927-1131
               

               
Cow position:
               
chr5:62172007-62172223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
928-1100
               

               
Cow position:
               
chr5:1282202-1282030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
928-1124
               

               
Cow position:
               
chr5:17048000-17048196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
928-1124
               

               
Cow position:
               
chr5:48799662-48799857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
928-1128
               

               
Cow position:
               
chr5:63306008-63305805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
929-1131
               

               
Cow position:
               
chr5:66972005-66972207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
134, 154
               

               
Conread position:
               
929-1131
               

               
Cow position:
               
chr5:70270564-70270767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
163, 114
               

               
Conread position:
               
929-1231
               

               
Cow position:
               
chr5:63103512-63103815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
930-1123
               

               
Cow position:
               
chr5:18404476-18404282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
930-1124
               

               
Cow position:
               
chr5:11129629-11129822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
930-1131
               

               
Cow position:
               
chr5:50573361-50573561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 145
               

               
Conread position:
               
931-1111
               

               
Cow position:
               
chr5:32698789-32698609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
931-1124
               

               
Cow position:
               
chr5:49286855-49286663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
931-1124
               

               
Cow position:
               
chr5:58100081-58099890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
932-1102
               

               
Cow position:
               
chr5:8995115-8994941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
932-1108
               

               
Cow position:
               
chr5:1688551-1688369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
932-1126
               

               
Cow position:
               
chr5:12161297-12161105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
933-1128
               

               
Cow position:
               
chr5:48765240-48765432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
934-1110
               

               
Cow position:
               
chr5:33792240-33792413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
934-1150
               

               
Cow position:
               
chr5:22565246-22565464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 112
               

               
Conread position:
               
935-1114
               

               
Cow position:
               
chr5:7385755-7385933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 102
               

               
Conread position:
               
935-1131
               

               
Cow position:
               
chr5:50729108-50729300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
936-1124
               

               
Cow position:
               
chr5:44707962-44707774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
937-1124
               

               
Cow position:
               
chr5:33180526-33180704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
937-1150
               

               
Cow position:
               
chr5:13691964-13691754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
938-1124
               

               
Cow position:
               
chr5:26138808-26138622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
938-1124
               

               
Cow position:
               
chr5:39173575-39173389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
940-1134
               

               
Cow position:
               
chr5:31020500-31020306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 143
               

               
Conread position:
               
941-1129
               

               
Cow position:
               
chr5:60210524-60210337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
941-1245
               

               
Cow position:
               
chr5:21005059-21004759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
942-1124
               

               
Cow position:
               
chr5:39368598-39368416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
943-1124
               

               
Cow position:
               
chr5:44617019-44616838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
123, 142
               

               
Conread position:
               
943-1131
               

               
Cow position:
               
chr5:72564376-72564566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 109
               

               
Conread position:
               
944-1120
               

               
Cow position:
               
chr5:39675831-39675650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
944-1131
               

               
Cow position:
               
chr5:12149164-12149350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
119, 139
               

               
Conread position:
               
944-1131
               

               
Cow position:
               
chr5:71846036-71846225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
945-1143
               

               
Cow position:
               
chr5:54310948-54311147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 49
               

               
Conread position:
               
946-1094
               

               
Cow position:
               
chr5:42744388-42744539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
946-1124
               

               
Cow position:
               
chr5:22761937-22761759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
946-1129
               

               
Cow position:
               
chr5:55430254-55430437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
946-1150
               

               
Cow position:
               
chr5:62678278-62678479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
948-1233
               

               
Cow position:
               
chr5:9099813-9099528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
116, 137
               

               
Conread position:
               
949-1130
               

               
Cow position:
               
chr5:40423267-40423446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 130
               

               
Conread position:
               
950-1125
               

               
Cow position:
               
chr5:62107864-62107696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
951-1121
               

               
Cow position:
               
chr5:43457883-43457721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
951-1128
               

               
Cow position:
               
chr5:5785814-5785637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 134
               

               
Conread position:
               
951-1128
               

               
Cow position:
               
chr5:26403877-26403696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
951-1130
               

               
Cow position:
               
chr5:36679821-36679636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
951-1146
               

               
Cow position:
               
chr5:38852984-38853176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
112, 132
               

               
Conread position:
               
952-1134
               

               
Cow position:
               
chr5:47317342-47317159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 133
               

               
Conread position:
               
955-1061
               

               
Cow position:
               
chr5:20127708-20127814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
956-1124
               

               
Cow position:
               
chr5:66064758-66064926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
956-1125
               

               
Cow position:
               
chr5:11639150-11639319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
958-1128
               

               
Cow position:
               
chr5:34482059-34481889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
958-1128
               

               
Cow position:
               
chr5:73967800-73967630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
958-1131
               

               
Cow position:
               
chr5:65968337-65968160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 163
               

               
Conread position:
               
959-1128
               

               
Cow position:
               
chr5:63840511-63840344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr5:630840-631003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr5:2395232-2395395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 122
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr5:27933404-27933567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr5:35031263-35031426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1124
               

               
Cow position:
               
chr5:48496924-48497086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
961-1125
               

               
Cow position:
               
chr5:25913397-25913562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
961-1125
               

               
Cow position:
               
chr5:25935886-25936052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
962-1117
               

               
Cow position:
               
chr5:12105437-12105591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
962-1124
               

               
Cow position:
               
chr5:59136179-59136341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
962-1125
               

               
Cow position:
               
chr5:9867814-9867975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
962-1131
               

               
Cow position:
               
chr5:66338722-66338888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
964-1121
               

               
Cow position:
               
chr5:21937768-21937608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
964-1130
               

               
Cow position:
               
chr5:44994407-44994234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 160
               

               
Conread position:
               
964-1131
               

               
Cow position:
               
chr5:34442155-34441987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
967-1126
               

               
Cow position:
               
chr5:70035039-70035198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
967-1130
               

               
Cow position:
               
chr5:75259469-75259632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
967-1131
               

               
Cow position:
               
chr5:9894483-9894321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
967-1131
               

               
Cow position:
               
chr5:43858785-43858623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
970-1154
               

               
Cow position:
               
chr5:33471595-33471411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
975-1091
               

               
Cow position:
               
chr5:14703631-14703512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
975-1130
               

               
Cow position:
               
chr5:30950496-30950336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
979-1093
               

               
Cow position:
               
chr5:57890124-57890238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1120
               

               
Cow position:
               
chr5:28807532-28807674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
979-1124
               

               
Cow position:
               
chr5:12718907-12719051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
979-1124
               

               
Cow position:
               
chr5:23397540-23397677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
979-1124
               

               
Cow position:
               
chr5:31681914-31682059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1124
               

               
Cow position:
               
chr5:52243761-52243617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
979-1125
               

               
Cow position:
               
chr5:20959009-20959151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
979-1129
               

               
Cow position:
               
chr5:34887545-34887395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
979-1130
               

               
Cow position:
               
chr5:14538996-14538846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr5:32153663-32153511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr5:34288815-34288665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr5:37255703-37255551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr5:58793961-58793810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
979-1131
               

               
Cow position:
               
chr5:67212034-67212183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
979-1150
               

               
Cow position:
               
chr5:28927944-28927772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
980-1128
               

               
Cow position:
               
chr5:42845946-42845798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 106
               

               
Conread position:
               
980-1130
               

               
Cow position:
               
chr5:7763732-7763877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
981-1105
               

               
Cow position:
               
chr5:48926038-48925914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr5:14278825-14278968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr5:18514327-18514184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr5:27501297-27501154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr5:58516449-58516306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
981-1124
               

               
Cow position:
               
chr5:59473676-59473819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
981-1129
               

               
Cow position:
               
chr5:60215449-60215594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
983-1124
               

               
Cow position:
               
chr5:472971-472827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
983-1129
               

               
Cow position:
               
chr5:6219760-6219907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
983-1131
               

               
Cow position:
               
chr5:60519832-60519971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
985-1123
               

               
Cow position:
               
chr5:39936762-39936900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
985-1131
               

               
Cow position:
               
chr5:47313132-47313278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
986-1131
               

               
Cow position:
               
chr5:56137236-56137377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
987-1129
               

               
Cow position:
               
chr5:35123883-35123736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
987-1131
               

               
Cow position:
               
chr5:45226167-45226019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
988-1110
               

               
Cow position:
               
chr5:73551398-73551276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
988-1120
               

               
Cow position:
               
chr5:75725892-75725760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
988-1120
               

               
Cow position:
               
chr5:75726141-75726009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:3453797-3453661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 99
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:29240131-29240267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:43446495-43446359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:45837506-45837642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:45881528-45881389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
988-1124
               

               
Cow position:
               
chr5:64650790-64650926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
988-1138
               

               
Cow position:
               
chr5:67598360-67598510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
990-1115
               

               
Cow position:
               
chr5:10253257-10253382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
990-1124
               

               
Cow position:
               
chr5:35807285-35807151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
990-1124
               

               
Cow position:
               
chr5:47347019-47347153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
990-1128
               

               
Cow position:
               
chr5:5725401-5725267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
991-1128
               

               
Cow position:
               
chr5:40559502-40559365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
991-1151
               

               
Cow position:
               
chr5:44447705-44447545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
992-1124
               

               
Cow position:
               
chr5:20971412-20971280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
993-1124
               

               
Cow position:
               
chr5:20344835-20344967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
993-1128
               

               
Cow position:
               
chr5:43330026-43329891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
993-1131
               

               
Cow position:
               
chr5:61725638-61725774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
994-1131
               

               
Cow position:
               
chr5:26990066-26990198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
995-1124
               

               
Cow position:
               
chr5:39361437-39361308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
995-1124
               

               
Cow position:
               
chr5:45965983-45965854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
995-1124
               

               
Cow position:
               
chr5:62397024-62397153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
995-1128
               

               
Cow position:
               
chr5:43677007-43676874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
995-1130
               

               
Cow position:
               
chr5:75244617-75244486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
996-1121
               

               
Cow position:
               
chr5:46052134-46052009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
997-1124
               

               
Cow position:
               
chr5:1641568-1641695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
997-1134
               

               
Cow position:
               
chr5:34915812-34915949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
997-1157
               

               
Cow position:
               
chr5:34560812-34560972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
998-1120
               

               
Cow position:
               
chr5:53825198-53825318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
998-1124
               

               
Cow position:
               
chr5:12212501-12212375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
998-1124
               

               
Cow position:
               
chr5:42533044-42532918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
998-1237
               

               
Cow position:
               
chr5:6151158-6150922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
999-1124
               

               
Cow position:
               
chr5:37084371-37084496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
1003-1125
               

               
Cow position:
               
chr5:60037972-60037850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
1005-1130
               

               
Cow position:
               
chr5:20555069-20554946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
1006-1124
               

               
Cow position:
               
chr5:366305-366187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
1006-1124
               

               
Cow position:
               
chr5:31694025-31693907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
1006-1124
               

               
Cow position:
               
chr5:51902474-51902356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
1006-1131
               

               
Cow position:
               
chr5:60715675-60715550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
1007-1124
               

               
Cow position:
               
chr5:37271332-37271449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
1007-1128
               

               
Cow position:
               
chr5:43990074-43990195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
1007-1131
               

               
Cow position:
               
chr5:47857305-47857433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1008-1120
               

               
Cow position:
               
chr5:47036771-47036883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
1009-1124
               

               
Cow position:
               
chr5:35280775-35280890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1011-1143
               

               
Cow position:
               
chr5:5111392-5111263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
1012-1124
               

               
Cow position:
               
chr5:18716445-18716333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
1015-1124
               

               
Cow position:
               
chr5:20341617-20341508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
1015-1129
               

               
Cow position:
               
chr5:53735876-53735990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
1015-1130
               

               
Cow position:
               
chr5:53055864-53055749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
1015-1130
               

               
Cow position:
               
chr5:63033062-63033178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
1015-1131
               

               
Cow position:
               
chr5:4797624-4797506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1016-1226
               

               
Cow position:
               
chr5:50483172-50482969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
1019-1131
               

               
Cow position:
               
chr5:4551825-4551936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
1020-1124
               

               
Cow position:
               
chr5:20777731-20777627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
1020-1131
               

               
Cow position:
               
chr5:3281525-3281636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
1021-1131
               

               
Cow position:
               
chr5:64392849-64392959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
1022-1124
               

               
Cow position:
               
chr5:24918200-24918302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
1022-1130
               

               
Cow position:
               
chr5:40831009-40831117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
1026-1131
               

               
Cow position:
               
chr5:45170061-45170167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
1030-1124
               

               
Cow position:
               
chr5:37653984-37654078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 53
               
Show alignments to all cow chromosomes.