Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044D16.3 | 
| Conread position: | 74-211 | 
| Cow position: | chr3:6505803-6505666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 210-289 | 
| Cow position: | chr3:6504133-6504054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 80 | 
| Alignm identity: | 74 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 286-364 | 
| Cow position: | chr3:6503108-6503030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 79 | 
| Alignm identity: | 73 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 414-523 | 
| Cow position: | chr3:6493459-6493350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 519-597 | 
| Cow position: | chr3:6492199-6492121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 79 | 
| Alignm identity: | 78 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 598-697 | 
| Cow position: | chr3:6489908-6489809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 757-895 | 
| Cow position: | chr3:6486355-6486217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 889-1053 | 
| Cow position: | chr3:6484253-6484090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 0 | 
| Conread position: | 1035-1212 | 
| Cow position: | chr3:6483191-6483014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1213-1349 | 
| Cow position: | chr3:6482079-6481943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1347-1685 | 
| Cow position: | chr3:6471893-6471564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 0 | 
Show alignments to all cow chromosomes.
