Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044D23.3 |
| Conread position: | 1-80 |
| Cow position: | chr5:21812134-21812213 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-200 |
| Cow position: | chr5:21813342-21813462 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 116 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-339 |
| Cow position: | chr5:21813969-21814109 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-481 |
| Cow position: | chr5:21814448-21814599 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 477-637 |
| Cow position: | chr5:21815207-21815367 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-748 |
| Cow position: | chr5:21815506-21815625 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 115 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 719-856 |
| Cow position: | chr5:21816529-21816666 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 125 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 856-995 |
| Cow position: | chr5:21816948-21817087 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 993-1072 |
| Cow position: | chr5:21819272-21819351 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1100-1208 |
| Cow position: | chr5:21819847-21819953 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1191-1276 |
| Cow position: | chr5:21820125-21820210 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1275-1365 |
| Cow position: | chr5:21820393-21820483 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1363-1492 |
| Cow position: | chr5:21820706-21820835 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 120 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1491-1920 |
| Cow position: | chr5:21820953-21821381 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 147 |
Show alignments to all cow chromosomes.