Cow genome map

Conread name: Ss1.1-Pig4-TMW8044J10.3

Conread position: 786-1015
Cow position: chr12:47533130-47532898 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 29

Conread position: 800-1078
Cow position: chr12:26206686-26206409 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 90

Conread position: 801-1092
Cow position: chr12:40879752-40880041 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 804-1090
Cow position: chr12:9340001-9340296 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 41

Conread position: 804-1090
Cow position: chr12:37883567-37883852 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 91

Conread position: 804-1091
Cow position: chr12:6973514-6973811 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 203

Conread position: 806-1092
Cow position: chr12:46932221-46932510 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 101

Conread position: 813-1080
Cow position: chr12:10156696-10156426 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 55

Conread position: 820-994
Cow position: chr12:34596547-34596726 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 24

Conread position: 820-1081
Cow position: chr12:37891358-37891111 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 85

Conread position: 820-1090
Cow position: chr12:14679996-14679725 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 73

Conread position: 843-1092
Cow position: chr12:33250112-33250368 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 63

Conread position: 846-1092
Cow position: chr12:11553369-11553611 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 59

Conread position: 849-1092
Cow position: chr12:12955173-12955409 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 228, 77

Conread position: 873-1091
Cow position: chr12:7163607-7163813 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 873-1092
Cow position: chr12:45730728-45730949 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 58

Conread position: 881-1038
Cow position: chr12:9526236-9526079 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 881-1038
Cow position: chr12:35772718-35772564 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 24

Conread position: 881-1080
Cow position: chr12:9616494-9616296 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 24

Conread position: 881-1084
Cow position: chr12:19215790-19215996 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 23

Conread position: 881-1089
Cow position: chr12:29466275-29466487 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 24

Conread position: 881-1090
Cow position: chr12:45459957-45460168 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 24

Conread position: 881-1092
Cow position: chr12:5602122-5602344 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 50

Conread position: 884-1090
Cow position: chr12:41918277-41918487 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 20

Conread position: 888-1079
Cow position: chr12:43484365-43484558 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 16

Conread position: 893-1073
Cow position: chr12:26186626-26186804 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 12

Conread position: 894-1078
Cow position: chr12:13947975-13947786 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 13

Conread position: 898-1090
Cow position: chr12:39956961-39956769 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 131

Conread position: 904-1079
Cow position: chr12:16295784-16295615 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 29

Conread position: 911-1081
Cow position: chr12:21136280-21136116 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 917-1078
Cow position: chr12:29772818-29772657 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 919-1092
Cow position: chr12:30237195-30237369 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 942-1080
Cow position: chr12:9578529-9578391 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 102

Conread position: 943-1092
Cow position: chr12:14164746-14164593 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.