Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 801-1052 |
| Cow position: | chr14:37008677-37008932 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 804-1077 |
| Cow position: | chr14:34216501-34216228 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 820-1073 |
| Cow position: | chr14:23030601-23030852 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 820-1073 |
| Cow position: | chr14:28167307-28167053 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 833-1090 |
| Cow position: | chr14:13832017-13831762 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 838-1080 |
| Cow position: | chr14:38062875-38062634 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 841-1080 |
| Cow position: | chr14:4527382-4527611 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 846-1090 |
| Cow position: | chr14:37201354-37201599 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 846-1091 |
| Cow position: | chr14:35327161-35327417 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 846-1092 |
| Cow position: | chr14:6909595-6909343 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 79, 186 |
| Conread position: | 854-1072 |
| Cow position: | chr14:49717076-49717293 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 870-1090 |
| Cow position: | chr14:32754812-32755028 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 873-1081 |
| Cow position: | chr14:35271045-35271254 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 877-1080 |
| Cow position: | chr14:22239679-22239469 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 878-1084 |
| Cow position: | chr14:12785062-12784859 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 881-1077 |
| Cow position: | chr14:39302809-39303009 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 881-1078 |
| Cow position: | chr14:35365103-35364903 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 881-1090 |
| Cow position: | chr14:35032919-35032698 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 881-1091 |
| Cow position: | chr14:30502413-30502201 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr14:15881481-15881260 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 881-1092 |
| Cow position: | chr14:38892246-38892029 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 883-1081 |
| Cow position: | chr14:11562503-11562694 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 130, 22 |
| Conread position: | 885-1072 |
| Cow position: | chr14:38066850-38067032 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 885-1090 |
| Cow position: | chr14:11491582-11491789 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 168, 41 |
| Conread position: | 898-1092 |
| Cow position: | chr14:48215845-48215644 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 920-1075 |
| Cow position: | chr14:4337946-4337792 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 942-1081 |
| Cow position: | chr14:16334802-16334940 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 942-1085 |
| Cow position: | chr14:40429189-40429045 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 960-1081 |
| Cow position: | chr14:3503734-3503855 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 83 |
Show alignments to all cow chromosomes.