Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 803-1015 |
| Cow position: | chr15:23933535-23933312 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 804-1090 |
| Cow position: | chr15:19926660-19926948 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 813-1016 |
| Cow position: | chr15:39948317-39948519 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 161, 92 |
| Conread position: | 831-1079 |
| Cow position: | chr15:26444764-26444519 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 831-1080 |
| Cow position: | chr15:51406878-51407139 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 848-1081 |
| Cow position: | chr15:36442397-36442615 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 873-1081 |
| Cow position: | chr15:41192691-41192897 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 143, 32 |
| Conread position: | 873-1091 |
| Cow position: | chr15:9741023-9741238 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 155 |
| Conread position: | 879-1073 |
| Cow position: | chr15:18044167-18043972 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 881-1033 |
| Cow position: | chr15:50202172-50202015 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 881-1048 |
| Cow position: | chr15:18664816-18664985 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 881-1073 |
| Cow position: | chr15:33154449-33154636 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 881-1079 |
| Cow position: | chr15:38540477-38540279 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 881-1080 |
| Cow position: | chr15:35219699-35219897 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 881-1080 |
| Cow position: | chr15:42479381-42479577 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 881-1090 |
| Cow position: | chr15:11649754-11649969 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 881-1090 |
| Cow position: | chr15:45712176-45712389 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr15:40300731-40300513 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 882-1079 |
| Cow position: | chr15:21367801-21367612 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 883-1080 |
| Cow position: | chr15:31408872-31409065 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 883-1092 |
| Cow position: | chr15:10829203-10829420 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 883-1092 |
| Cow position: | chr15:40347766-40347975 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 884-1082 |
| Cow position: | chr15:39035896-39035695 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 886-1092 |
| Cow position: | chr15:48870414-48870206 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 891-1081 |
| Cow position: | chr15:2136127-2135942 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 893-1073 |
| Cow position: | chr15:36363120-36362947 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 893-1080 |
| Cow position: | chr15:20081098-20080909 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 894-1080 |
| Cow position: | chr15:27395146-27394960 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 899-1081 |
| Cow position: | chr15:47443899-47444076 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 907-1092 |
| Cow position: | chr15:34715576-34715387 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 123 |
Show alignments to all cow chromosomes.