Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 813-1052 |
| Cow position: | chr16:10832988-10833223 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 821-1092 |
| Cow position: | chr16:13816065-13816339 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 841-1090 |
| Cow position: | chr16:50928755-50928493 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 855-1090 |
| Cow position: | chr16:22606851-22607092 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 861-1081 |
| Cow position: | chr16:28423962-28424196 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 873-1073 |
| Cow position: | chr16:33149782-33149589 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 873-1089 |
| Cow position: | chr16:35159690-35159906 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 880-1080 |
| Cow position: | chr16:19311258-19311462 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 140 |
| Conread position: | 881-1015 |
| Cow position: | chr16:42287876-42288012 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 881-1030 |
| Cow position: | chr16:27807715-27807559 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 881-1034 |
| Cow position: | chr16:51805483-51805637 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 881-1039 |
| Cow position: | chr16:23639061-23639221 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 881-1052 |
| Cow position: | chr16:39398518-39398702 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 881-1079 |
| Cow position: | chr16:44753834-44753640 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 881-1090 |
| Cow position: | chr16:37364913-37365122 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 168, 29 |
| Conread position: | 881-1091 |
| Cow position: | chr16:13411511-13411298 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 136, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr16:11588472-11588694 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 881-1092 |
| Cow position: | chr16:12729178-12729389 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 881-1092 |
| Cow position: | chr16:15318903-15318702 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 173, 25 |
| Conread position: | 881-1092 |
| Cow position: | chr16:22769908-22770125 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr16:38332170-38331955 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 882-1092 |
| Cow position: | chr16:24890350-24890565 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 883-1081 |
| Cow position: | chr16:11354488-11354684 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 883-1092 |
| Cow position: | chr16:11336065-11336278 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 896-1080 |
| Cow position: | chr16:31732182-31731994 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 905-1073 |
| Cow position: | chr16:51984809-51984979 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 920-1090 |
| Cow position: | chr16:40664949-40664776 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 942-1070 |
| Cow position: | chr16:18768052-18768180 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 942-1080 |
| Cow position: | chr16:2537859-2537994 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 944-1080 |
| Cow position: | chr16:47237515-47237652 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.