Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 794-1080 |
| Cow position: | chr2:66920263-66919975 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 802-1084 |
| Cow position: | chr2:37957974-37957695 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 803-1004 |
| Cow position: | chr2:84473774-84473979 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 803-1092 |
| Cow position: | chr2:62138842-62139129 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 804-1092 |
| Cow position: | chr2:39519484-39519188 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 813-1044 |
| Cow position: | chr2:43669511-43669271 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 813-1073 |
| Cow position: | chr2:59479661-59479922 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 816-1090 |
| Cow position: | chr2:36881379-36881653 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 816-1090 |
| Cow position: | chr2:49148071-49147796 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 819-1080 |
| Cow position: | chr2:14514271-14513998 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 820-1081 |
| Cow position: | chr2:80717775-80718041 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 846-1071 |
| Cow position: | chr2:5075336-5075557 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 846-1081 |
| Cow position: | chr2:80428110-80427868 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 849-1073 |
| Cow position: | chr2:51552313-51552534 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 172, 89 |
| Conread position: | 871-1080 |
| Cow position: | chr2:28892613-28892817 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 873-1073 |
| Cow position: | chr2:34582179-34582367 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 881-1052 |
| Cow position: | chr2:43312063-43312232 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 881-1071 |
| Cow position: | chr2:28011875-28011687 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 881-1073 |
| Cow position: | chr2:6610012-6610200 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 881-1073 |
| Cow position: | chr2:16483433-16483626 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 881-1073 |
| Cow position: | chr2:64104361-64104165 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 881-1080 |
| Cow position: | chr2:1148590-1148786 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 881-1080 |
| Cow position: | chr2:34870941-34871139 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 881-1080 |
| Cow position: | chr2:69431376-69431172 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 881-1081 |
| Cow position: | chr2:7429061-7428850 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 881-1081 |
| Cow position: | chr2:12537490-12537691 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 881-1081 |
| Cow position: | chr2:63776016-63775817 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 881-1089 |
| Cow position: | chr2:53353403-53353615 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 881-1090 |
| Cow position: | chr2:79449026-79449228 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr2:6352023-6352236 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 881-1092 |
| Cow position: | chr2:14921272-14921068 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 202, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr2:58682776-58682565 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr2:71595215-71595432 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 882-1092 |
| Cow position: | chr2:6322734-6322948 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 883-1052 |
| Cow position: | chr2:78105777-78105607 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 883-1065 |
| Cow position: | chr2:33012539-33012720 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 884-1038 |
| Cow position: | chr2:62249421-62249270 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 884-1073 |
| Cow position: | chr2:19793264-19793079 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 885-1092 |
| Cow position: | chr2:69397436-69397230 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 886-1092 |
| Cow position: | chr2:6588643-6588843 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 888-1074 |
| Cow position: | chr2:8364745-8364926 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 889-1090 |
| Cow position: | chr2:21599625-21599828 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 893-1069 |
| Cow position: | chr2:2876549-2876726 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 898-1081 |
| Cow position: | chr2:45532417-45532603 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 900-1081 |
| Cow position: | chr2:45433916-45433734 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 904-1082 |
| Cow position: | chr2:69872361-69872539 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 908-1079 |
| Cow position: | chr2:10108617-10108449 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 917-1073 |
| Cow position: | chr2:16037742-16037584 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 918-1082 |
| Cow position: | chr2:8997654-8997818 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 162, 141 |
| Conread position: | 918-1082 |
| Cow position: | chr2:9300775-9300611 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 141 |
| Conread position: | 939-1044 |
| Cow position: | chr2:63193483-63193588 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 942-1064 |
| Cow position: | chr2:46386880-46387001 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 942-1080 |
| Cow position: | chr2:48630278-48630415 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 942-1080 |
| Cow position: | chr2:74083517-74083380 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 948-1073 |
| Cow position: | chr2:877691-877815 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 52 |
Show alignments to all cow chromosomes.