Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8044J10.3
        

               Conread position:
               794-1080
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               802-1084
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               803-1004
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 179
               

               Conread position:
               803-1092
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               804-1092
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               813-1044
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               813-1073
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               816-1090
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               816-1090
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               819-1080
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               820-1081
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 79
               

               Conread position:
               846-1071
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               78, 59
               

               Conread position:
               846-1081
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               849-1073
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               172, 89
               

               Conread position:
               871-1080
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               873-1073
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               881-1052
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               881-1071
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               881-1073
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               881-1073
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               881-1073
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               881-1089
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               881-1090
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               202, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               882-1092
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               883-1052
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               883-1065
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               884-1038
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               884-1073
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               885-1092
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               886-1092
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               888-1074
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               889-1090
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 113
               

               Conread position:
               893-1069
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               898-1081
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               900-1081
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               904-1082
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               908-1079
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 111
               

               Conread position:
               917-1073
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               918-1082
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               162, 141
               

               Conread position:
               918-1082
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 141
               

               Conread position:
               939-1044
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               942-1064
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               942-1080
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               942-1080
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               948-1073
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               106, 52
               
Show alignments to all cow chromosomes.