Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 782-1048 |
| Cow position: | chr21:38037212-38036941 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 795-1092 |
| Cow position: | chr21:37367495-37367795 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 803-997 |
| Cow position: | chr21:46891560-46891362 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 804-1079 |
| Cow position: | chr21:28158235-28157970 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 804-1091 |
| Cow position: | chr21:448531-448237 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 820-1080 |
| Cow position: | chr21:49647256-49646997 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 846-1031 |
| Cow position: | chr21:39721499-39721316 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 846-1091 |
| Cow position: | chr21:45448358-45448604 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 867-1081 |
| Cow position: | chr21:18082366-18082580 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 873-1081 |
| Cow position: | chr21:17223719-17223928 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 880-1081 |
| Cow position: | chr21:16337014-16337218 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 881-1069 |
| Cow position: | chr21:33973966-33974158 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 881-1073 |
| Cow position: | chr21:1721148-1721334 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 881-1073 |
| Cow position: | chr21:3846850-3847035 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 881-1073 |
| Cow position: | chr21:33196973-33197161 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 881-1078 |
| Cow position: | chr21:29868566-29868766 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 881-1080 |
| Cow position: | chr21:38926832-38927037 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 881-1080 |
| Cow position: | chr21:45299185-45299392 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 881-1081 |
| Cow position: | chr21:13455480-13455678 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 881-1081 |
| Cow position: | chr21:28148158-28147958 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 881-1081 |
| Cow position: | chr21:47730645-47730844 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 881-1090 |
| Cow position: | chr21:34415907-34415706 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 882-1078 |
| Cow position: | chr21:43038016-43038209 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 126, 23 |
| Conread position: | 884-1081 |
| Cow position: | chr21:4261878-4262073 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 887-1070 |
| Cow position: | chr21:36952876-36953063 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 894-1092 |
| Cow position: | chr21:12452977-12453180 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 895-1090 |
| Cow position: | chr21:41539884-41539689 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 896-1081 |
| Cow position: | chr21:30616316-30616131 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 898-1079 |
| Cow position: | chr21:27769806-27769624 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 899-1080 |
| Cow position: | chr21:17382505-17382321 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 929-1090 |
| Cow position: | chr21:16801517-16801679 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 942-1073 |
| Cow position: | chr21:21042442-21042311 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 942-1078 |
| Cow position: | chr21:9446928-9447061 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 942-1079 |
| Cow position: | chr21:37312837-37312974 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 942-1081 |
| Cow position: | chr21:38696099-38696236 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.