Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 1-75 |
| Cow position: | chr24:35348857-35348931 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 70 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-666 |
| Cow position: | chr24:35361203-35361707 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 7 |
| Conread position: | 722-1081 |
| Cow position: | chr24:35361726-35362101 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 65 |
| Conread position: | 804-1092 |
| Cow position: | chr24:23636673-23636379 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 820-1080 |
| Cow position: | chr24:17860003-17859746 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 846-1090 |
| Cow position: | chr24:26395934-26396184 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 846-1090 |
| Cow position: | chr24:39578750-39578994 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 846-1092 |
| Cow position: | chr24:806085-806333 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 846-1092 |
| Cow position: | chr24:14708193-14708428 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 58 |
| Conread position: | 854-1084 |
| Cow position: | chr24:26249921-26250148 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 865-1065 |
| Cow position: | chr24:31013513-31013314 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 881-1069 |
| Cow position: | chr24:24485913-24485720 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 881-1072 |
| Cow position: | chr24:39749404-39749204 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 881-1081 |
| Cow position: | chr24:27649828-27649629 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 881-1089 |
| Cow position: | chr24:44855541-44855747 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 193, 24 |
| Conread position: | 882-1081 |
| Cow position: | chr24:34545869-34546072 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 883-1078 |
| Cow position: | chr24:26037461-26037643 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 883-1080 |
| Cow position: | chr24:26625548-26625740 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 883-1089 |
| Cow position: | chr24:2696747-2696954 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 887-1033 |
| Cow position: | chr24:889768-889621 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 887-1092 |
| Cow position: | chr24:32344597-32344392 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 894-1092 |
| Cow position: | chr24:5731463-5731660 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 11 |
Show alignments to all cow chromosomes.