Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8044J10.3
        

               Conread position:
               610-770
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               795-1007
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               802-1090
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               93, 36
               

               Conread position:
               804-1077
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 88
               

               Conread position:
               820-977
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               820-997
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               846-998
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               846-1080
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               871-1090
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               209, 34
               

               Conread position:
               873-1079
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               873-1092
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               874-1090
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               880-1091
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               881-1050
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               881-1072
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 138
               

               Conread position:
               881-1072
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               881-1078
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               881-1078
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               881-1078
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               47, 150
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               885-1092
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               890-1086
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               892-1081
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               893-1090
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               900-1073
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               900-1081
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               902-1081
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               917-1081
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               933-1038
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.