Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 800-1075 |
| Cow position: | chr7:24006342-24006607 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 108 |
| Conread position: | 803-1038 |
| Cow position: | chr7:14626780-14626532 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 804-1073 |
| Cow position: | chr7:3316680-3316943 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 806-1092 |
| Cow position: | chr7:53161790-53161508 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 820-1048 |
| Cow position: | chr7:20933149-20933379 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 823-928 |
| Cow position: | chr7:18417143-18417248 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 835-1092 |
| Cow position: | chr7:3419089-3419345 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 846-1080 |
| Cow position: | chr7:43959860-43960097 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 860-1051 |
| Cow position: | chr7:8270667-8270476 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 873-1080 |
| Cow position: | chr7:53546799-53547018 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 874-1073 |
| Cow position: | chr7:53495966-53495766 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 875-1038 |
| Cow position: | chr7:31622750-31622585 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 881-1043 |
| Cow position: | chr7:58544523-58544356 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 881-1044 |
| Cow position: | chr7:11075259-11075425 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 881-1069 |
| Cow position: | chr7:56686580-56686770 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 881-1072 |
| Cow position: | chr7:61151300-61151485 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 881-1079 |
| Cow position: | chr7:6436060-6435863 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr7:24961235-24961435 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 194, 23 |
| Conread position: | 883-1060 |
| Cow position: | chr7:45757415-45757226 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 883-1080 |
| Cow position: | chr7:685818-686010 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 883-1090 |
| Cow position: | chr7:21224084-21224291 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 883-1092 |
| Cow position: | chr7:51915964-51916169 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 883-1092 |
| Cow position: | chr7:63607582-63607789 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 894-1081 |
| Cow position: | chr7:62598584-62598770 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 896-1073 |
| Cow position: | chr7:32548733-32548556 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 897-1081 |
| Cow position: | chr7:35906203-35906387 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 900-1086 |
| Cow position: | chr7:51402556-51402375 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 904-1081 |
| Cow position: | chr7:11345616-11345793 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 917-1092 |
| Cow position: | chr7:49240789-49240963 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 163, 12 |
| Conread position: | 942-1092 |
| Cow position: | chr7:11511715-11511565 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 133, 68 |
| Conread position: | 954-1080 |
| Cow position: | chr7:17588935-17589062 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.