Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8044J10.3
        

               Conread position:
               798-1038
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               807-1080
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               816-1080
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               105, 89
               

               Conread position:
               818-1008
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               824-1092
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               846-974
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               870-1090
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               880-1080
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               880-1092
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               881-1043
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               881-1073
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               881-1078
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               881-1078
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               881-1079
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               881-1079
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               881-1080
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               881-1091
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               881-1092
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               882-1050
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               883-1080
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               883-1090
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               883-1092
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               884-1092
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               886-1090
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               180, 18
               

               Conread position:
               887-1081
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               889-1050
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               891-1065
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               893-1092
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               893-1092
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               161, 12
               

               Conread position:
               895-1092
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               898-1091
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               906-1081
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               918-1090
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               939-1073
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               942-1090
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               133, 85
               
Show alignments to all cow chromosomes.