Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8044J10.3 |
| Conread position: | 798-1038 |
| Cow position: | chr8:32841082-32841322 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 807-1080 |
| Cow position: | chr8:53730711-53730990 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 816-1080 |
| Cow position: | chr8:50036023-50036289 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 818-1008 |
| Cow position: | chr8:30428359-30428169 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 824-1092 |
| Cow position: | chr8:682659-682926 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 846-974 |
| Cow position: | chr8:2386740-2386867 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 870-1090 |
| Cow position: | chr8:29009468-29009688 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 880-1080 |
| Cow position: | chr8:57041008-57041204 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 880-1092 |
| Cow position: | chr8:18793308-18793098 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 881-1043 |
| Cow position: | chr8:18897536-18897374 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 881-1073 |
| Cow position: | chr8:24206888-24206698 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 881-1078 |
| Cow position: | chr8:27322944-27322757 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 881-1078 |
| Cow position: | chr8:35287740-35287939 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 881-1079 |
| Cow position: | chr8:4984310-4984113 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 881-1079 |
| Cow position: | chr8:19153072-19153270 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 881-1080 |
| Cow position: | chr8:23393080-23393276 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 881-1091 |
| Cow position: | chr8:19678235-19678451 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 881-1092 |
| Cow position: | chr8:20924146-20924362 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr8:22941412-22941197 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 881-1092 |
| Cow position: | chr8:22997005-22997211 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 881-1092 |
| Cow position: | chr8:43166694-43166907 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 882-1050 |
| Cow position: | chr8:17215641-17215817 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 883-1080 |
| Cow position: | chr8:29810765-29810963 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 883-1090 |
| Cow position: | chr8:26693613-26693396 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 883-1092 |
| Cow position: | chr8:59148505-59148294 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 884-1092 |
| Cow position: | chr8:20348565-20348350 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 886-1090 |
| Cow position: | chr8:42581197-42581399 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 180, 18 |
| Conread position: | 887-1081 |
| Cow position: | chr8:19616813-19616618 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 889-1050 |
| Cow position: | chr8:20807951-20808114 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 891-1065 |
| Cow position: | chr8:7469021-7468851 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 893-1092 |
| Cow position: | chr8:5961234-5961030 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 893-1092 |
| Cow position: | chr8:15640753-15640565 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 161, 12 |
| Conread position: | 895-1092 |
| Cow position: | chr8:45457332-45457536 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 898-1091 |
| Cow position: | chr8:1975642-1975837 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 906-1081 |
| Cow position: | chr8:12067919-12067740 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 918-1090 |
| Cow position: | chr8:57191996-57191822 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 939-1073 |
| Cow position: | chr8:19512895-19512763 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 942-1090 |
| Cow position: | chr8:51161443-51161297 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 133, 85 |
Show alignments to all cow chromosomes.