• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
804-1131
               

               
Cow position:
               
chr11:62965897-62965551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 307
               

               
Conread position:
               
812-1089
               

               
Cow position:
               
chr11:19890554-19890818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
813-1343
               

               
Cow position:
               
chr11:34962732-34963278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 82
               

               
Conread position:
               
818-1303
               

               
Cow position:
               
chr11:8525431-8524949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
820-1342
               

               
Cow position:
               
chr11:81143885-81143338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
30, 313
               

               
Conread position:
               
821-1180
               

               
Cow position:
               
chr11:16226381-16226746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 258
               

               
Conread position:
               
822-1131
               

               
Cow position:
               
chr11:8105462-8105782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
823-1288
               

               
Cow position:
               
chr11:52464119-52464559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
824-1008
               

               
Cow position:
               
chr11:10875701-10875884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
825-1103
               

               
Cow position:
               
chr11:21472644-21472359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
825-1186
               

               
Cow position:
               
chr11:81337293-81336931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
826-1084
               

               
Cow position:
               
chr11:61846322-61846049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
827-1133
               

               
Cow position:
               
chr11:1485677-1485360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
156, 247
               

               
Conread position:
               
828-1041
               

               
Cow position:
               
chr11:18912950-18913160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
185, 15
               

               
Conread position:
               
828-1200
               

               
Cow position:
               
chr11:18588895-18588520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 39
               

               
Conread position:
               
829-1011
               

               
Cow position:
               
chr11:49873112-49873303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
830-1077
               

               
Cow position:
               
chr11:53719629-53719887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
830-1107
               

               
Cow position:
               
chr11:42491175-42490891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 269
               

               
Conread position:
               
831-982
               

               
Cow position:
               
chr11:7683520-7683664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
831-985
               

               
Cow position:
               
chr11:63166471-63166321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
831-1088
               

               
Cow position:
               
chr11:19238468-19238201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
831-1164
               

               
Cow position:
               
chr11:6154102-6154438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
831-1180
               

               
Cow position:
               
chr11:29004127-29004479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
831-1225
               

               
Cow position:
               
chr11:41809788-41809402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
831-1244
               

               
Cow position:
               
chr11:30879366-30879775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
831-1336
               

               
Cow position:
               
chr11:31866287-31866780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
832-1085
               

               
Cow position:
               
chr11:46770765-46770505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
832-1091
               

               
Cow position:
               
chr11:52516300-52516559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
180, 154
               

               
Conread position:
               
832-1181
               

               
Cow position:
               
chr11:8827469-8827826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
832-1335
               

               
Cow position:
               
chr11:67345956-67345457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 223
               

               
Conread position:
               
833-985
               

               
Cow position:
               
chr11:2911130-2910983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
833-1044
               

               
Cow position:
               
chr11:22103453-22103665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1133
               

               
Cow position:
               
chr11:6156856-6156556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
833-1169
               

               
Cow position:
               
chr11:27386650-27386304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 270
               

               
Conread position:
               
833-1190
               

               
Cow position:
               
chr11:80788220-80787851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1235
               

               
Cow position:
               
chr11:80761691-80761279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
833-1279
               

               
Cow position:
               
chr11:71868913-71868458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1292
               

               
Cow position:
               
chr11:51756006-51756458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
833-1303
               

               
Cow position:
               
chr11:60302267-60301808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
833-1327
               

               
Cow position:
               
chr11:40458811-40459298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
833-1344
               

               
Cow position:
               
chr11:7924899-7924395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
834-989
               

               
Cow position:
               
chr11:393745-393895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
834-1086
               

               
Cow position:
               
chr11:64932607-64932346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
834-1116
               

               
Cow position:
               
chr11:43913913-43914197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 66
               

               
Conread position:
               
834-1149
               

               
Cow position:
               
chr11:42777173-42777491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
834-1216
               

               
Cow position:
               
chr11:70619745-70620126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
834-1225
               

               
Cow position:
               
chr11:56821566-56821152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
834-1251
               

               
Cow position:
               
chr11:37974616-37975048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 388
               

               
Conread position:
               
834-1303
               

               
Cow position:
               
chr11:4732029-4732513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 267
               

               
Conread position:
               
834-1318
               

               
Cow position:
               
chr11:45277465-45276964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
834-1327
               

               
Cow position:
               
chr11:33350011-33349509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 260
               

               
Conread position:
               
834-1338
               

               
Cow position:
               
chr11:17890032-17889523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
834-1344
               

               
Cow position:
               
chr11:55744164-55744677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 219
               

               
Conread position:
               
835-1190
               

               
Cow position:
               
chr11:70272995-70273362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
835-1216
               

               
Cow position:
               
chr11:58399962-58400330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 8
               

               
Conread position:
               
836-1107
               

               
Cow position:
               
chr11:72314239-72314519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
836-1190
               

               
Cow position:
               
chr11:11752825-11752461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
836-1226
               

               
Cow position:
               
chr11:76606382-76606764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
836-1231
               

               
Cow position:
               
chr11:5032084-5031679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
836-1235
               

               
Cow position:
               
chr11:8841050-8840657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 196
               

               
Conread position:
               
837-1117
               

               
Cow position:
               
chr11:9837407-9837115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
837-1222
               

               
Cow position:
               
chr11:3833654-3833276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 128
               

               
Conread position:
               
838-1081
               

               
Cow position:
               
chr11:73478318-73478567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
838-1106
               

               
Cow position:
               
chr11:79979358-79979624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
838-1333
               

               
Cow position:
               
chr11:85723396-85723890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 261
               

               
Conread position:
               
839-1074
               

               
Cow position:
               
chr11:35363191-35363439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
839-1107
               

               
Cow position:
               
chr11:5989675-5989398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 262
               

               
Conread position:
               
839-1249
               

               
Cow position:
               
chr11:35684803-35684385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 255
               

               
Conread position:
               
840-1169
               

               
Cow position:
               
chr11:65430760-65431089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
840-1249
               

               
Cow position:
               
chr11:33754201-33753797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
841-973
               

               
Cow position:
               
chr11:2821232-2821363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
841-979
               

               
Cow position:
               
chr11:64352021-64351885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr11:78480492-78480639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
841-1083
               

               
Cow position:
               
chr11:10800586-10800840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
841-1117
               

               
Cow position:
               
chr11:49105751-49106040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
841-1129
               

               
Cow position:
               
chr11:15695120-15694828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
139, 204
               

               
Conread position:
               
841-1130
               

               
Cow position:
               
chr11:51044240-51043932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
841-1137
               

               
Cow position:
               
chr11:67951263-67950969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
841-1201
               

               
Cow position:
               
chr11:81576053-81575683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
146, 127
               

               
Conread position:
               
841-1225
               

               
Cow position:
               
chr11:53552953-53553306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
841-1236
               

               
Cow position:
               
chr11:42358822-42359219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
841-1252
               

               
Cow position:
               
chr11:48496869-48496477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 54
               

               
Conread position:
               
841-1318
               

               
Cow position:
               
chr11:865994-866464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
841-1318
               

               
Cow position:
               
chr11:53778310-53778804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
841-1329
               

               
Cow position:
               
chr11:42083181-42083649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
841-1336
               

               
Cow position:
               
chr11:46748171-46747657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 380
               

               
Conread position:
               
841-1341
               

               
Cow position:
               
chr11:36182386-36182900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 402
               

               
Conread position:
               
841-1343
               

               
Cow position:
               
chr11:18509311-18508815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
841-1344
               

               
Cow position:
               
chr11:5328493-5328993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
842-940
               

               
Cow position:
               
chr11:51029050-51029149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
842-946
               

               
Cow position:
               
chr11:80555957-80556060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
842-952
               

               
Cow position:
               
chr11:15373336-15373446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-973
               

               
Cow position:
               
chr11:67847991-67847860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-977
               

               
Cow position:
               
chr11:23495568-23495703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr11:27907251-27907386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr11:33001698-33001835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr11:65970153-65970293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr11:5481799-5481656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr11:36475000-36475140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr11:6644919-6645066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr11:49679445-49679297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr11:75286709-75286563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
145, 88
               

               
Conread position:
               
842-992
               

               
Cow position:
               
chr11:6633087-6633235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 108
               

               
Conread position:
               
842-992
               

               
Cow position:
               
chr11:71391907-71391761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-1007
               

               
Cow position:
               
chr11:40402134-40401973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr11:21626038-21625875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr11:64048019-64048180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1011
               

               
Cow position:
               
chr11:16547302-16547137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
842-1017
               

               
Cow position:
               
chr11:31236588-31236762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
139, 133
               

               
Conread position:
               
842-1042
               

               
Cow position:
               
chr11:71705704-71705492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
145, 65
               

               
Conread position:
               
842-1045
               

               
Cow position:
               
chr11:35920076-35919865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
842-1047
               

               
Cow position:
               
chr11:84774816-84775020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
842-1050
               

               
Cow position:
               
chr11:37118183-37118404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
842-1057
               

               
Cow position:
               
chr11:62376738-62376513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
842-1060
               

               
Cow position:
               
chr11:40250902-40250676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
842-1060
               

               
Cow position:
               
chr11:58600562-58600788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
842-1065
               

               
Cow position:
               
chr11:4474777-4474543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr11:8564276-8564037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr11:28848278-28848046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
842-1079
               

               
Cow position:
               
chr11:75255135-75255375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
842-1080
               

               
Cow position:
               
chr11:35238527-35238781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1081
               

               
Cow position:
               
chr11:3303535-3303780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
138, 194
               

               
Conread position:
               
842-1084
               

               
Cow position:
               
chr11:36309711-36309462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
842-1085
               

               
Cow position:
               
chr11:7298684-7298437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
842-1086
               

               
Cow position:
               
chr11:18117987-18118237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr11:21856658-21856920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr11:32609693-32609958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr11:41599029-41598770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr11:8212474-8212731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 128
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr11:32076443-32076185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
141, 240
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr11:44153435-44153182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
143, 235
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr11:75195495-75195241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 164
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr11:75160083-75159830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 153
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr11:78819806-78820058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr11:31437300-31437033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 241
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr11:33686848-33686597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr11:38599076-38598800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:24726791-24726514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:26327781-26327526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
160, 10
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:36202932-36203209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:45677806-45678077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
135, 256
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:52127356-52127085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 181
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:52424781-52425049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
140, 203
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:61876465-61876739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr11:81066883-81066614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 247
               

               
Conread position:
               
842-1110
               

               
Cow position:
               
chr11:41239573-41239293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
842-1112
               

               
Cow position:
               
chr11:76206089-76206363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr11:986643-986912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr11:4384324-4384601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr11:37068605-37068335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr11:62750051-62749774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1117
               

               
Cow position:
               
chr11:3797108-3797361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
231, 123
               

               
Conread position:
               
842-1118
               

               
Cow position:
               
chr11:71846650-71846362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 261
               

               
Conread position:
               
842-1122
               

               
Cow position:
               
chr11:25319749-25320044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr11:2422115-2422412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr11:75401884-75401602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
170, 141
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr11:17112928-17112637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
117, 206
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr11:33256022-33255720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 265
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr11:50197746-50197437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr11:62979176-62979486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 275
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr11:86926222-86925941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr11:31900747-31901043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr11:41577306-41577023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr11:47586649-47586353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
842-1132
               

               
Cow position:
               
chr11:83196200-83196498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
842-1136
               

               
Cow position:
               
chr11:52475489-52475183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 212
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr11:15048105-15048412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 241
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr11:23773902-23774209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr11:27447841-27448144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 237
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr11:29614994-29615293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
170, 141
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr11:81174589-81174889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
842-1138
               

               
Cow position:
               
chr11:43593691-43593991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
133, 239
               

               
Conread position:
               
842-1138
               

               
Cow position:
               
chr11:51208115-51208422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 238
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr11:43644402-43644094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
842-1146
               

               
Cow position:
               
chr11:63149727-63149414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 212
               

               
Conread position:
               
842-1147
               

               
Cow position:
               
chr11:4412321-4412009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 231
               

               
Conread position:
               
842-1154
               

               
Cow position:
               
chr11:18389162-18388853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
842-1169
               

               
Cow position:
               
chr11:8339706-8339371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 200
               

               
Conread position:
               
842-1169
               

               
Cow position:
               
chr11:10076473-10076803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
842-1180
               

               
Cow position:
               
chr11:73774426-73774778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 264
               

               
Conread position:
               
842-1181
               

               
Cow position:
               
chr11:54856333-54856663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 191
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr11:26483418-26483760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr11:31138698-31138348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 237
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr11:41167046-41166696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
842-1186
               

               
Cow position:
               
chr11:30120964-30120610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr11:439960-439607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
95, 127
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr11:33294093-33293723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
116, 276
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr11:50236270-50235921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
842-1192
               

               
Cow position:
               
chr11:32749806-32750168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
148, 267
               

               
Conread position:
               
842-1199
               

               
Cow position:
               
chr11:27939185-27939548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
122, 172
               

               
Conread position:
               
842-1231
               

               
Cow position:
               
chr11:35881605-35882007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 255
               

               
Conread position:
               
842-1232
               

               
Cow position:
               
chr11:58588042-58588441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 253
               

               
Conread position:
               
842-1236
               

               
Cow position:
               
chr11:61427313-61427693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1240
               

               
Cow position:
               
chr11:41812213-41811811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 88
               

               
Conread position:
               
842-1240
               

               
Cow position:
               
chr11:66425175-66424776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
842-1242
               

               
Cow position:
               
chr11:43897834-43898244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
842-1243
               

               
Cow position:
               
chr11:44637062-44636648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
842-1244
               

               
Cow position:
               
chr11:20601938-20602334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 115
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr11:76114351-76114751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 226
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr11:71168879-71168473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 167
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr11:73512721-73512331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr11:77751067-77750664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr11:40793002-40792593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:1071395-1070974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 171
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:18086639-18086235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:25386769-25387182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 90
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:36848641-36849030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:37278500-37278113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:48271894-48272315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr11:73924860-73924448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 185
               

               
Conread position:
               
842-1250
               

               
Cow position:
               
chr11:23232814-23232404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
842-1250
               

               
Cow position:
               
chr11:67746976-67747395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 257
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr11:53147841-53147416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr11:69118998-69119409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 199
               

               
Conread position:
               
842-1257
               

               
Cow position:
               
chr11:40133152-40132738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
137, 233
               

               
Conread position:
               
842-1281
               

               
Cow position:
               
chr11:3393511-3393067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
842-1288
               

               
Cow position:
               
chr11:39499075-39499509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 127
               

               
Conread position:
               
842-1299
               

               
Cow position:
               
chr11:3780726-3780250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 196
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr11:77705463-77705919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
842-1304
               

               
Cow position:
               
chr11:32198639-32199113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr11:23251905-23251415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr11:41986345-41985864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 195
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr11:50153119-50152629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr11:64029557-64029083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr11:4206997-4207496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 261
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr11:17860455-17859968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 242
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr11:40818946-40818448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 414
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr11:45282635-45283113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 134
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr11:6594549-6594042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr11:26535473-26535970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr11:1380393-1380868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr11:70382996-70382498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr11:287635-287138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr11:10095041-10095535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr11:17321360-17321860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr11:33413932-33414431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 241
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr11:50111890-50112373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
116, 98
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr11:40880-41363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr11:1849465-1848972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr11:52297525-52297030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 284
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr11:63469584-63470054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
842-1331
               

               
Cow position:
               
chr11:70484163-70483652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 378
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr11:1486170-1485662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 323
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr11:15467168-15467647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 234
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr11:44031698-44032208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 407
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr11:47351052-47351534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
146, 97
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr11:62490132-62490622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 178
               

               
Conread position:
               
842-1336
               

               
Cow position:
               
chr11:32595165-32595660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 196
               

               
Conread position:
               
842-1336
               

               
Cow position:
               
chr11:46329198-46329703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr11:15503800-15504311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr11:24438538-24438011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr11:14649615-14649105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 269
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr11:40467425-40466914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 248
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr11:52133125-52132615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr11:4323065-4323572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 136
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr11:48672407-48672920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr11:80923637-80923112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 337
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr11:15285919-15285415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 214
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr11:26067481-26066980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 241
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr11:58990209-58990721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 196
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr11:66733534-66734041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 189
               

               
Conread position:
               
843-984
               

               
Cow position:
               
chr11:10545688-10545830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
843-1120
               

               
Cow position:
               
chr11:6325450-6325174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
843-1326
               

               
Cow position:
               
chr11:81137921-81138403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
843-1327
               

               
Cow position:
               
chr11:30639248-30638759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
843-1335
               

               
Cow position:
               
chr11:18698572-18699070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 265
               

               
Conread position:
               
843-1343
               

               
Cow position:
               
chr11:34615967-34616468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 196
               

               
Conread position:
               
844-1018
               

               
Cow position:
               
chr11:6091947-6091776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
844-1089
               

               
Cow position:
               
chr11:61137498-61137246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
844-1183
               

               
Cow position:
               
chr11:21437329-21437674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
844-1202
               

               
Cow position:
               
chr11:58123570-58123938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 259
               

               
Conread position:
               
844-1234
               

               
Cow position:
               
chr11:18572504-18572898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 257
               

               
Conread position:
               
844-1252
               

               
Cow position:
               
chr11:30924841-30925268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
844-1317
               

               
Cow position:
               
chr11:13061519-13061071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
844-1317
               

               
Cow position:
               
chr11:42292135-42291657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 235
               

               
Conread position:
               
844-1325
               

               
Cow position:
               
chr11:25745022-25745499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
844-1325
               

               
Cow position:
               
chr11:43361100-43360595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
845-980
               

               
Cow position:
               
chr11:36315302-36315437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-984
               

               
Cow position:
               
chr11:48659395-48659529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr11:27326186-27326326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-1035
               

               
Cow position:
               
chr11:46451320-46451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
845-1036
               

               
Cow position:
               
chr11:10294299-10294492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
845-1080
               

               
Cow position:
               
chr11:68570970-68570718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
845-1087
               

               
Cow position:
               
chr11:65694135-65693886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
845-1091
               

               
Cow position:
               
chr11:46692699-46692950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 173
               

               
Conread position:
               
845-1107
               

               
Cow position:
               
chr11:47596014-47596275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 139
               

               
Conread position:
               
845-1122
               

               
Cow position:
               
chr11:3704022-3704292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
845-1126
               

               
Cow position:
               
chr11:55117174-55117456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
142, 203
               

               
Conread position:
               
845-1131
               

               
Cow position:
               
chr11:65857559-65857857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 260
               

               
Conread position:
               
845-1148
               

               
Cow position:
               
chr11:77241082-77241383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
845-1155
               

               
Cow position:
               
chr11:16251552-16251223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
845-1180
               

               
Cow position:
               
chr11:84724353-84724700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
135, 261
               

               
Conread position:
               
845-1186
               

               
Cow position:
               
chr11:75551383-75551054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
186, 139
               

               
Conread position:
               
845-1227
               

               
Cow position:
               
chr11:36986663-36987042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 246
               

               
Conread position:
               
845-1245
               

               
Cow position:
               
chr11:2092049-2092436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
845-1245
               

               
Cow position:
               
chr11:44576038-44575644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 198
               

               
Conread position:
               
845-1246
               

               
Cow position:
               
chr11:44036417-44036831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 311
               

               
Conread position:
               
845-1248
               

               
Cow position:
               
chr11:44234059-44234467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr11:54334034-54334441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 258
               

               
Conread position:
               
845-1270
               

               
Cow position:
               
chr11:59872628-59873059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
845-1314
               

               
Cow position:
               
chr11:19487774-19487299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 182
               

               
Conread position:
               
845-1318
               

               
Cow position:
               
chr11:35579956-35580445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
845-1319
               

               
Cow position:
               
chr11:65495626-65495159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 259
               

               
Conread position:
               
845-1330
               

               
Cow position:
               
chr11:61454833-61454306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 228
               

               
Conread position:
               
846-981
               

               
Cow position:
               
chr11:12528893-12528765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
846-1107
               

               
Cow position:
               
chr11:62019896-62019620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
138, 261
               

               
Conread position:
               
846-1116
               

               
Cow position:
               
chr11:3175082-3175364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
846-1116
               

               
Cow position:
               
chr11:79995117-79994839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
846-1326
               

               
Cow position:
               
chr11:77237824-77238323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
847-954
               

               
Cow position:
               
chr11:7460879-7460770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
847-976
               

               
Cow position:
               
chr11:12762546-12762417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-981
               

               
Cow position:
               
chr11:59959275-59959141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
847-982
               

               
Cow position:
               
chr11:29608467-29608332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-984
               

               
Cow position:
               
chr11:32218296-32218157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr11:25808055-25807917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-1004
               

               
Cow position:
               
chr11:25760396-25760553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
847-1035
               

               
Cow position:
               
chr11:16795447-16795252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
847-1036
               

               
Cow position:
               
chr11:2343985-2344174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
847-1041
               

               
Cow position:
               
chr11:40300054-40299858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
847-1045
               

               
Cow position:
               
chr11:55347966-55348176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
847-1050
               

               
Cow position:
               
chr11:68327352-68327140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
847-1088
               

               
Cow position:
               
chr11:34412800-34413053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
847-1096
               

               
Cow position:
               
chr11:19787849-19788097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
847-1126
               

               
Cow position:
               
chr11:53130516-53130805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
847-1130
               

               
Cow position:
               
chr11:56797035-56796744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
847-1131
               

               
Cow position:
               
chr11:47165433-47165144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
847-1186
               

               
Cow position:
               
chr11:53313865-53313521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
137, 114
               

               
Conread position:
               
847-1187
               

               
Cow position:
               
chr11:7394865-7395186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
847-1191
               

               
Cow position:
               
chr11:63157210-63156861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
847-1221
               

               
Cow position:
               
chr11:53452642-53452263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 201
               

               
Conread position:
               
847-1222
               

               
Cow position:
               
chr11:64638822-64638438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
847-1240
               

               
Cow position:
               
chr11:10213855-10213463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
847-1246
               

               
Cow position:
               
chr11:951972-952376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 183
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr11:70609491-70609909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
120, 256
               

               
Conread position:
               
847-1318
               

               
Cow position:
               
chr11:63065357-63065836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 250
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr11:38638826-38639284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
847-1321
               

               
Cow position:
               
chr11:39115198-39115661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
847-1325
               

               
Cow position:
               
chr11:3719955-3720446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 187
               

               
Conread position:
               
847-1326
               

               
Cow position:
               
chr11:21894450-21893957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 219
               

               
Conread position:
               
847-1332
               

               
Cow position:
               
chr11:78381340-78380868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr11:77759056-77758552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr11:83357096-83357602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
847-1342
               

               
Cow position:
               
chr11:42016935-42016431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 256
               

               
Conread position:
               
847-1344
               

               
Cow position:
               
chr11:42836259-42835743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 378
               

               
Conread position:
               
847-1344
               

               
Cow position:
               
chr11:72870615-72871105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
848-967
               

               
Cow position:
               
chr11:47662429-47662548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-981
               

               
Cow position:
               
chr11:18526188-18526055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-982
               

               
Cow position:
               
chr11:16900969-16901103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-985
               

               
Cow position:
               
chr11:69075012-69075150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
848-1008
               

               
Cow position:
               
chr11:53859990-53860155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
848-1043
               

               
Cow position:
               
chr11:54134543-54134342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
848-1059
               

               
Cow position:
               
chr11:6639216-6639431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
848-1068
               

               
Cow position:
               
chr11:7315422-7315192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
848-1074
               

               
Cow position:
               
chr11:82232128-82232360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
848-1100
               

               
Cow position:
               
chr11:74929485-74929751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
848-1104
               

               
Cow position:
               
chr11:68750944-68750696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
246, 18
               

               
Conread position:
               
848-1116
               

               
Cow position:
               
chr11:5197373-5197093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
136, 227
               

               
Conread position:
               
848-1131
               

               
Cow position:
               
chr11:62016566-62016284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
848-1140
               

               
Cow position:
               
chr11:17968871-17968576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 200
               

               
Conread position:
               
848-1178
               

               
Cow position:
               
chr11:16910664-16910315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
848-1224
               

               
Cow position:
               
chr11:64090381-64090008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
848-1224
               

               
Cow position:
               
chr11:80820294-80819915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 229
               

               
Conread position:
               
848-1236
               

               
Cow position:
               
chr11:3769585-3769209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
848-1246
               

               
Cow position:
               
chr11:70838598-70838180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 329
               

               
Conread position:
               
848-1247
               

               
Cow position:
               
chr11:59702189-59702602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr11:28643786-28644200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr11:56518608-56518198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 298
               

               
Conread position:
               
848-1251
               

               
Cow position:
               
chr11:62151177-62150779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 120
               

               
Conread position:
               
848-1267
               

               
Cow position:
               
chr11:76369817-76369387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
848-1288
               

               
Cow position:
               
chr11:87155217-87155675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
848-1318
               

               
Cow position:
               
chr11:43524327-43524794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 91
               

               
Conread position:
               
848-1332
               

               
Cow position:
               
chr11:27248197-27248687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
848-1338
               

               
Cow position:
               
chr11:7873866-7874344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
848-1343
               

               
Cow position:
               
chr11:64334562-64335046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 202
               

               
Conread position:
               
849-981
               

               
Cow position:
               
chr11:37547207-37547076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
849-1249
               

               
Cow position:
               
chr11:63847557-63847957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
849-1266
               

               
Cow position:
               
chr11:6835233-6835667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 186
               

               
Conread position:
               
849-1302
               

               
Cow position:
               
chr11:47755657-47755212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
849-1338
               

               
Cow position:
               
chr11:5418558-5418053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
849-1344
               

               
Cow position:
               
chr11:25791987-25791483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 217
               

               
Conread position:
               
851-977
               

               
Cow position:
               
chr11:49056883-49057009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
851-1115
               

               
Cow position:
               
chr11:64087741-64088012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 210
               

               
Conread position:
               
851-1186
               

               
Cow position:
               
chr11:21497247-21497574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 108
               

               
Conread position:
               
851-1327
               

               
Cow position:
               
chr11:30720805-30721293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 200
               

               
Conread position:
               
851-1338
               

               
Cow position:
               
chr11:13190927-13191444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
852-985
               

               
Cow position:
               
chr11:17514968-17515101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
852-998
               

               
Cow position:
               
chr11:32254607-32254458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
852-1249
               

               
Cow position:
               
chr11:80530079-80530471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
852-1291
               

               
Cow position:
               
chr11:24601674-24602117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 221
               

               
Conread position:
               
852-1303
               

               
Cow position:
               
chr11:70459283-70459726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 155
               

               
Conread position:
               
854-1279
               

               
Cow position:
               
chr11:7248166-7247747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 177
               

               
Conread position:
               
854-1279
               

               
Cow position:
               
chr11:8988519-8988091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 163
               

               
Conread position:
               
854-1299
               

               
Cow position:
               
chr11:36981278-36981730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 200
               

               
Conread position:
               
854-1338
               

               
Cow position:
               
chr11:70303797-70304278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
856-1246
               

               
Cow position:
               
chr11:22978144-22977765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
856-1302
               

               
Cow position:
               
chr11:73354343-73353899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 231
               

               
Conread position:
               
856-1317
               

               
Cow position:
               
chr11:52381157-52380689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
856-1330
               

               
Cow position:
               
chr11:6580526-6581032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 246
               

               
Conread position:
               
856-1342
               

               
Cow position:
               
chr11:1625502-1625013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 190
               

               
Conread position:
               
857-1086
               

               
Cow position:
               
chr11:35276015-35276254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
857-1225
               

               
Cow position:
               
chr11:40258684-40258321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
857-1305
               

               
Cow position:
               
chr11:4674737-4674273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
126, 238
               

               
Conread position:
               
858-1222
               

               
Cow position:
               
chr11:20491288-20491655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
858-1343
               

               
Cow position:
               
chr11:43430732-43430227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 84
               

               
Conread position:
               
859-981
               

               
Cow position:
               
chr11:67600483-67600605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
859-984
               

               
Cow position:
               
chr11:30466899-30466779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr11:31873284-31873407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr11:63920572-63920448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
859-1037
               

               
Cow position:
               
chr11:37563185-37563365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
859-1056
               

               
Cow position:
               
chr11:79019800-79019602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
859-1084
               

               
Cow position:
               
chr11:19508012-19508246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
859-1096
               

               
Cow position:
               
chr11:1668390-1668641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
859-1097
               

               
Cow position:
               
chr11:25165161-25165407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
859-1113
               

               
Cow position:
               
chr11:38010096-38009835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
859-1124
               

               
Cow position:
               
chr11:35148884-35149151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
859-1128
               

               
Cow position:
               
chr11:37347191-37347472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
859-1130
               

               
Cow position:
               
chr11:30110687-30110958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
859-1134
               

               
Cow position:
               
chr11:85764668-85764935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
859-1140
               

               
Cow position:
               
chr11:7334006-7333714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 245
               

               
Conread position:
               
859-1144
               

               
Cow position:
               
chr11:38193867-38194167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
859-1175
               

               
Cow position:
               
chr11:37160506-37160830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr11:22932246-22931929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
859-1180
               

               
Cow position:
               
chr11:1500145-1500474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 224
               

               
Conread position:
               
859-1203
               

               
Cow position:
               
chr11:10620610-10620259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
859-1203
               

               
Cow position:
               
chr11:14308354-14308707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
859-1219
               

               
Cow position:
               
chr11:44642570-44642207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
100, 317
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr11:8828913-8828546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr11:23128820-23128453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr11:31352855-31352465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr11:42519460-42519819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
859-1242
               

               
Cow position:
               
chr11:48650510-48650893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
859-1245
               

               
Cow position:
               
chr11:11534186-11533823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
859-1250
               

               
Cow position:
               
chr11:7589906-7590304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 246
               

               
Conread position:
               
859-1282
               

               
Cow position:
               
chr11:46580082-46580507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
859-1295
               

               
Cow position:
               
chr11:9222010-9221561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 107
               

               
Conread position:
               
859-1299
               

               
Cow position:
               
chr11:83066211-83066657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
859-1303
               

               
Cow position:
               
chr11:68910131-68909684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
859-1313
               

               
Cow position:
               
chr11:21844417-21843960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
859-1321
               

               
Cow position:
               
chr11:74316422-74316893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
859-1336
               

               
Cow position:
               
chr11:2788095-2788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
859-1337
               

               
Cow position:
               
chr11:59463916-59463435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
859-1341
               

               
Cow position:
               
chr11:77745538-77745042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
859-1343
               

               
Cow position:
               
chr11:18484444-18483995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
860-981
               

               
Cow position:
               
chr11:81922597-81922720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
860-984
               

               
Cow position:
               
chr11:85271981-85271858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
860-985
               

               
Cow position:
               
chr11:40609004-40608880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
860-1023
               

               
Cow position:
               
chr11:48428811-48428971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
860-1074
               

               
Cow position:
               
chr11:84891035-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
860-1095
               

               
Cow position:
               
chr11:15125263-15125016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
860-1160
               

               
Cow position:
               
chr11:2309594-2309899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
860-1215
               

               
Cow position:
               
chr11:65987947-65988304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
860-1249
               

               
Cow position:
               
chr11:62225716-62226102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 90
               

               
Conread position:
               
860-1251
               

               
Cow position:
               
chr11:17831511-17831108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 245
               

               
Conread position:
               
860-1251
               

               
Cow position:
               
chr11:48474425-48474818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
860-1275
               

               
Cow position:
               
chr11:18244225-18243804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
117, 220
               

               
Conread position:
               
860-1285
               

               
Cow position:
               
chr11:68207119-68206695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
860-1319
               

               
Cow position:
               
chr11:49148766-49149231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
860-1322
               

               
Cow position:
               
chr11:48932866-48932401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
860-1325
               

               
Cow position:
               
chr11:38235960-38236436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
124, 232
               

               
Conread position:
               
860-1327
               

               
Cow position:
               
chr11:41549615-41549140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
860-1335
               

               
Cow position:
               
chr11:20761562-20762053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
860-1336
               

               
Cow position:
               
chr11:81300896-81300419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 246
               

               
Conread position:
               
860-1338
               

               
Cow position:
               
chr11:10302472-10301997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
860-1340
               

               
Cow position:
               
chr11:11125379-11125876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
861-1097
               

               
Cow position:
               
chr11:60470462-60470211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
861-1227
               

               
Cow position:
               
chr11:33526794-33527145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
861-1252
               

               
Cow position:
               
chr11:56654266-56654670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
861-1295
               

               
Cow position:
               
chr11:75177610-75178059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
861-1303
               

               
Cow position:
               
chr11:55761597-55762026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
861-1318
               

               
Cow position:
               
chr11:6234159-6233694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
861-1325
               

               
Cow position:
               
chr11:67931777-67931300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
861-1327
               

               
Cow position:
               
chr11:4436050-4436525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 213
               

               
Conread position:
               
861-1341
               

               
Cow position:
               
chr11:30165225-30165717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
862-1206
               

               
Cow position:
               
chr11:65445112-65444771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
862-1235
               

               
Cow position:
               
chr11:23138342-23137955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
862-1252
               

               
Cow position:
               
chr11:29947208-29946797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 142
               

               
Conread position:
               
862-1334
               

               
Cow position:
               
chr11:13499733-13500210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 241
               

               
Conread position:
               
862-1344
               

               
Cow position:
               
chr11:65827013-65826540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
863-1066
               

               
Cow position:
               
chr11:10127894-10127691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
863-1221
               

               
Cow position:
               
chr11:43646697-43646325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
864-1072
               

               
Cow position:
               
chr11:39057359-39057567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
116, 144
               

               
Conread position:
               
864-1129
               

               
Cow position:
               
chr11:81614911-81614645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
864-1319
               

               
Cow position:
               
chr11:83043640-83043182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 369
               

               
Conread position:
               
864-1341
               

               
Cow position:
               
chr11:21549216-21549690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
865-1062
               

               
Cow position:
               
chr11:31885239-31885447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
865-1136
               

               
Cow position:
               
chr11:77207770-77208044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
108, 167
               

               
Conread position:
               
865-1138
               

               
Cow position:
               
chr11:71455509-71455794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 233
               

               
Conread position:
               
865-1191
               

               
Cow position:
               
chr11:32377909-32378244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
114, 216
               

               
Conread position:
               
865-1223
               

               
Cow position:
               
chr11:34830058-34829697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
865-1236
               

               
Cow position:
               
chr11:1362759-1362368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 385
               

               
Conread position:
               
865-1281
               

               
Cow position:
               
chr11:45646869-45646446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
865-1312
               

               
Cow position:
               
chr11:80564026-80564475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 138
               

               
Conread position:
               
865-1335
               

               
Cow position:
               
chr11:46746357-46746837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
866-979
               

               
Cow position:
               
chr11:32194445-32194329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
868-1320
               

               
Cow position:
               
chr11:66040998-66041458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 240
               

               
Conread position:
               
869-1140
               

               
Cow position:
               
chr11:48697173-48697454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
104, 206
               

               
Conread position:
               
869-1190
               

               
Cow position:
               
chr11:68422806-68423118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
869-1192
               

               
Cow position:
               
chr11:44818822-44819151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 222
               

               
Conread position:
               
869-1225
               

               
Cow position:
               
chr11:35874255-35873912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
869-1230
               

               
Cow position:
               
chr11:11232729-11232360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
869-1246
               

               
Cow position:
               
chr11:36659089-36658714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
869-1318
               

               
Cow position:
               
chr11:35348032-35347567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
116, 226
               

               
Conread position:
               
869-1319
               

               
Cow position:
               
chr11:83323302-83323762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
869-1326
               

               
Cow position:
               
chr11:62710145-62709693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 230
               

               
Conread position:
               
870-982
               

               
Cow position:
               
chr11:62738942-62739054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr11:17036825-17036711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr11:75510506-75510392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
870-1011
               

               
Cow position:
               
chr11:39034181-39034326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
870-1041
               

               
Cow position:
               
chr11:41315587-41315420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
870-1056
               

               
Cow position:
               
chr11:48232469-48232654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
870-1083
               

               
Cow position:
               
chr11:27462658-27462441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
870-1091
               

               
Cow position:
               
chr11:48901351-48901123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 161
               

               
Conread position:
               
870-1092
               

               
Cow position:
               
chr11:2281560-2281335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
870-1096
               

               
Cow position:
               
chr11:10388870-10388634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
870-1109
               

               
Cow position:
               
chr11:46473959-46473702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
870-1109
               

               
Cow position:
               
chr11:57062780-57063012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
870-1115
               

               
Cow position:
               
chr11:21798678-21798922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
870-1134
               

               
Cow position:
               
chr11:59156144-59155877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
870-1167
               

               
Cow position:
               
chr11:75355336-75355653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
870-1175
               

               
Cow position:
               
chr11:42793244-42792932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
870-1196
               

               
Cow position:
               
chr11:80520695-80521011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 114
               

               
Conread position:
               
870-1206
               

               
Cow position:
               
chr11:30912265-30911932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
870-1214
               

               
Cow position:
               
chr11:51144444-51144793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 162
               

               
Conread position:
               
870-1221
               

               
Cow position:
               
chr11:8428221-8428598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 256
               

               
Conread position:
               
870-1225
               

               
Cow position:
               
chr11:41271864-41272228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 265
               

               
Conread position:
               
870-1231
               

               
Cow position:
               
chr11:47193250-47193610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
870-1232
               

               
Cow position:
               
chr11:12111741-12111361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
112, 147
               

               
Conread position:
               
870-1238
               

               
Cow position:
               
chr11:30354794-30355160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
870-1243
               

               
Cow position:
               
chr11:62155357-62155745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
870-1249
               

               
Cow position:
               
chr11:33341419-33341031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
870-1264
               

               
Cow position:
               
chr11:79728947-79728535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 227
               

               
Conread position:
               
870-1295
               

               
Cow position:
               
chr11:10992006-10992423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
870-1303
               

               
Cow position:
               
chr11:13043410-13042979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
870-1303
               

               
Cow position:
               
chr11:17083571-17083144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 72
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr11:58103048-58102572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
117, 184
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr11:15632829-15632367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr11:17227913-17227458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
870-1332
               

               
Cow position:
               
chr11:45632038-45631583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 272
               

               
Conread position:
               
870-1334
               

               
Cow position:
               
chr11:53773399-53773883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 355
               

               
Conread position:
               
870-1336
               

               
Cow position:
               
chr11:30475726-30476196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
870-1338
               

               
Cow position:
               
chr11:17278935-17278477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
870-1339
               

               
Cow position:
               
chr11:6400345-6399859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
871-1192
               

               
Cow position:
               
chr11:17192554-17192224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 227
               

               
Conread position:
               
871-1222
               

               
Cow position:
               
chr11:49935015-49934643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
871-1251
               

               
Cow position:
               
chr11:83230657-83230286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
871-1336
               

               
Cow position:
               
chr11:61202890-61203371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 163
               

               
Conread position:
               
872-1088
               

               
Cow position:
               
chr11:41983718-41983495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 113
               

               
Conread position:
               
872-1117
               

               
Cow position:
               
chr11:75748164-75748417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
872-1221
               

               
Cow position:
               
chr11:50778098-50778454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 230
               

               
Conread position:
               
872-1221
               

               
Cow position:
               
chr11:67745056-67745406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
872-1222
               

               
Cow position:
               
chr11:50951279-50951642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 327
               

               
Conread position:
               
872-1248
               

               
Cow position:
               
chr11:377922-377529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 374
               

               
Conread position:
               
872-1272
               

               
Cow position:
               
chr11:34113002-34113400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
872-1303
               

               
Cow position:
               
chr11:34467326-34467731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
872-1317
               

               
Cow position:
               
chr11:30708232-30708688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
872-1340
               

               
Cow position:
               
chr11:30191898-30192386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 374
               

               
Conread position:
               
872-1343
               

               
Cow position:
               
chr11:62663504-62663031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 214
               

               
Conread position:
               
873-1003
               

               
Cow position:
               
chr11:83924970-83925099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
873-1192
               

               
Cow position:
               
chr11:24937392-24937723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
873-1221
               

               
Cow position:
               
chr11:7415116-7414789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
873-1319
               

               
Cow position:
               
chr11:44222630-44223066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
873-1321
               

               
Cow position:
               
chr11:19247466-19247018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
873-1324
               

               
Cow position:
               
chr11:259449-258983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
874-1154
               

               
Cow position:
               
chr11:38810620-38810329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 219
               

               
Conread position:
               
874-1221
               

               
Cow position:
               
chr11:18145074-18144730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
874-1224
               

               
Cow position:
               
chr11:45898325-45897959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
874-1337
               

               
Cow position:
               
chr11:55333639-55334120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 221
               

               
Conread position:
               
874-1344
               

               
Cow position:
               
chr11:29916269-29916758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
875-985
               

               
Cow position:
               
chr11:64405600-64405495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
875-1083
               

               
Cow position:
               
chr11:25336807-25337026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
875-1183
               

               
Cow position:
               
chr11:34032464-34032154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
875-1222
               

               
Cow position:
               
chr11:62574267-62573920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
108, 163
               

               
Conread position:
               
875-1246
               

               
Cow position:
               
chr11:63482694-63482321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 226
               

               
Conread position:
               
875-1344
               

               
Cow position:
               
chr11:55052604-55053071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 188
               

               
Conread position:
               
877-1131
               

               
Cow position:
               
chr11:62045132-62045393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 213
               

               
Conread position:
               
878-985
               

               
Cow position:
               
chr11:10839434-10839329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
878-1036
               

               
Cow position:
               
chr11:15608558-15608390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
878-1095
               

               
Cow position:
               
chr11:11460232-11460457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
878-1116
               

               
Cow position:
               
chr11:59370749-59370996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
878-1232
               

               
Cow position:
               
chr11:32439214-32438856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
878-1237
               

               
Cow position:
               
chr11:36799561-36799207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
879-1172
               

               
Cow position:
               
chr11:24584915-24585219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
879-1212
               

               
Cow position:
               
chr11:62880888-62880554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
879-1258
               

               
Cow position:
               
chr11:47544863-47545257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 288
               

               
Conread position:
               
879-1287
               

               
Cow position:
               
chr11:34120929-34121351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 183
               

               
Conread position:
               
879-1331
               

               
Cow position:
               
chr11:27746653-27747113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 217
               

               
Conread position:
               
879-1338
               

               
Cow position:
               
chr11:36194028-36194499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
880-1235
               

               
Cow position:
               
chr11:22499614-22499266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
881-1140
               

               
Cow position:
               
chr11:59673099-59672834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 216
               

               
Conread position:
               
881-1249
               

               
Cow position:
               
chr11:70836630-70836264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
881-1326
               

               
Cow position:
               
chr11:30764217-30764684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 208
               

               
Conread position:
               
881-1342
               

               
Cow position:
               
chr11:31227732-31228157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 78
               

               
Conread position:
               
882-1001
               

               
Cow position:
               
chr11:9234366-9234493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
882-1071
               

               
Cow position:
               
chr11:80824907-80825101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
882-1184
               

               
Cow position:
               
chr11:30596735-30597043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
882-1332
               

               
Cow position:
               
chr11:83397643-83398105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
882-1341
               

               
Cow position:
               
chr11:36940862-36940389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
883-1159
               

               
Cow position:
               
chr11:171957-171677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
883-1236
               

               
Cow position:
               
chr11:30934165-30934516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
883-1288
               

               
Cow position:
               
chr11:81162691-81162293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
883-1317
               

               
Cow position:
               
chr11:2917837-2917410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr11:63516563-63516824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
885-1183
               

               
Cow position:
               
chr11:56728688-56728998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 149
               

               
Conread position:
               
885-1248
               

               
Cow position:
               
chr11:3233821-3234187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
885-1249
               

               
Cow position:
               
chr11:41426655-41427015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 183
               

               
Conread position:
               
885-1313
               

               
Cow position:
               
chr11:36647102-36647506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 181
               

               
Conread position:
               
885-1337
               

               
Cow position:
               
chr11:33348443-33347996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
886-1249
               

               
Cow position:
               
chr11:77128411-77128775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
886-1299
               

               
Cow position:
               
chr11:45872576-45872145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
887-1245
               

               
Cow position:
               
chr11:33310714-33311086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
887-1319
               

               
Cow position:
               
chr11:68905319-68904903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
887-1327
               

               
Cow position:
               
chr11:75480283-75479830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 277
               

               
Conread position:
               
888-1192
               

               
Cow position:
               
chr11:17496001-17495684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
888-1342
               

               
Cow position:
               
chr11:2907781-2907321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
889-1239
               

               
Cow position:
               
chr11:8148141-8147795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
889-1318
               

               
Cow position:
               
chr11:49152699-49153124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
889-1330
               

               
Cow position:
               
chr11:66188576-66188126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
890-1137
               

               
Cow position:
               
chr11:2050326-2050582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
69, 220
               

               
Conread position:
               
890-1238
               

               
Cow position:
               
chr11:16342495-16342125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
890-1313
               

               
Cow position:
               
chr11:48544190-48544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
891-1105
               

               
Cow position:
               
chr11:63520520-63520745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
891-1288
               

               
Cow position:
               
chr11:3726033-3726441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 209
               

               
Conread position:
               
891-1344
               

               
Cow position:
               
chr11:35154080-35153610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 340
               

               
Conread position:
               
892-1276
               

               
Cow position:
               
chr11:18707065-18706687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 241
               

               
Conread position:
               
892-1303
               

               
Cow position:
               
chr11:77319172-77319581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
892-1320
               

               
Cow position:
               
chr11:5416649-5417072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
892-1331
               

               
Cow position:
               
chr11:20238421-20238873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
893-1121
               

               
Cow position:
               
chr11:21819695-21819454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
893-1335
               

               
Cow position:
               
chr11:36112166-36112610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
895-1318
               

               
Cow position:
               
chr11:65157656-65157221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
895-1338
               

               
Cow position:
               
chr11:2083899-2084349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
896-1318
               

               
Cow position:
               
chr11:42885018-42884601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
87, 162
               

               
Conread position:
               
898-1317
               

               
Cow position:
               
chr11:47899031-47899433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 189
               

               
Conread position:
               
899-1331
               

               
Cow position:
               
chr11:15016801-15017252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
900-1090
               

               
Cow position:
               
chr11:62808892-62808690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
900-1113
               

               
Cow position:
               
chr11:41438468-41438245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 188
               

               
Conread position:
               
900-1249
               

               
Cow position:
               
chr11:50072718-50073052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
900-1337
               

               
Cow position:
               
chr11:62239505-62239944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
901-1191
               

               
Cow position:
               
chr11:18341281-18340984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
901-1318
               

               
Cow position:
               
chr11:82940860-82940446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
904-1056
               

               
Cow position:
               
chr11:57769590-57769440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
904-1330
               

               
Cow position:
               
chr11:26144324-26143904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
905-1336
               

               
Cow position:
               
chr11:27405307-27404868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
906-1036
               

               
Cow position:
               
chr11:26277328-26277190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
908-1235
               

               
Cow position:
               
chr11:31226029-31225712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
909-1173
               

               
Cow position:
               
chr11:14094659-14094381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
909-1244
               

               
Cow position:
               
chr11:71501357-71501024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
909-1316
               

               
Cow position:
               
chr11:11469868-11469472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
909-1338
               

               
Cow position:
               
chr11:62620150-62620580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
910-1343
               

               
Cow position:
               
chr11:25620629-25620183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
910-1343
               

               
Cow position:
               
chr11:65762830-65762373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 417
               

               
Conread position:
               
911-1225
               

               
Cow position:
               
chr11:42044223-42043906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
912-1321
               

               
Cow position:
               
chr11:21728499-21728100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
913-1341
               

               
Cow position:
               
chr11:51293640-51293202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
915-1169
               

               
Cow position:
               
chr11:18591662-18591399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
915-1192
               

               
Cow position:
               
chr11:38874630-38874344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
916-1341
               

               
Cow position:
               
chr11:5433040-5433473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
917-1317
               

               
Cow position:
               
chr11:29960078-29960475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
918-1342
               

               
Cow position:
               
chr11:19593593-19594025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
919-1236
               

               
Cow position:
               
chr11:69810679-69811005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
920-1295
               

               
Cow position:
               
chr11:81406381-81406006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
920-1317
               

               
Cow position:
               
chr11:19501001-19500621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
921-1232
               

               
Cow position:
               
chr11:17660872-17661181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
31, 165
               

               
Conread position:
               
921-1278
               

               
Cow position:
               
chr11:23586413-23586784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
921-1344
               

               
Cow position:
               
chr11:39462395-39462830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 132
               

               
Conread position:
               
922-1331
               

               
Cow position:
               
chr11:2925512-2925107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 169
               

               
Conread position:
               
923-1151
               

               
Cow position:
               
chr11:21830573-21830332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 234
               

               
Conread position:
               
924-1338
               

               
Cow position:
               
chr11:15772942-15772510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 237
               

               
Conread position:
               
925-1192
               

               
Cow position:
               
chr11:61859118-61858845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 170
               

               
Conread position:
               
927-1220
               

               
Cow position:
               
chr11:52983474-52983761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
927-1287
               

               
Cow position:
               
chr11:11557952-11558324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
930-1203
               

               
Cow position:
               
chr11:67550578-67550309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
930-1248
               

               
Cow position:
               
chr11:70114259-70114584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
932-1174
               

               
Cow position:
               
chr11:2811935-2811690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
932-1317
               

               
Cow position:
               
chr11:5485796-5486199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
932-1325
               

               
Cow position:
               
chr11:65607905-65607497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
933-1247
               

               
Cow position:
               
chr11:36238571-36238888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
933-1319
               

               
Cow position:
               
chr11:36286488-36286889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
934-1249
               

               
Cow position:
               
chr11:61958959-61958632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 175
               

               
Conread position:
               
936-1342
               

               
Cow position:
               
chr11:71493068-71492656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
939-1295
               

               
Cow position:
               
chr11:63202444-63202086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
939-1344
               

               
Cow position:
               
chr11:27913070-27913494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 308
               

               
Conread position:
               
940-1321
               

               
Cow position:
               
chr11:68912939-68913330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
942-1226
               

               
Cow position:
               
chr11:67246603-67246877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
942-1338
               

               
Cow position:
               
chr11:19592199-19591793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
942-1340
               

               
Cow position:
               
chr11:64077703-64077292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
943-1242
               

               
Cow position:
               
chr11:63909853-63909561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
943-1310
               

               
Cow position:
               
chr11:3702751-3703127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
948-1153
               

               
Cow position:
               
chr11:33825077-33824869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
948-1344
               

               
Cow position:
               
chr11:2874190-2874612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
952-1334
               

               
Cow position:
               
chr11:13592542-13592940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
962-1303
               

               
Cow position:
               
chr11:51729113-51729443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
963-1279
               

               
Cow position:
               
chr11:19233120-19232805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
964-1222
               

               
Cow position:
               
chr11:48306517-48306259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
967-1129
               

               
Cow position:
               
chr11:62139073-62138922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
968-1245
               

               
Cow position:
               
chr11:71341630-71341356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
970-1288
               

               
Cow position:
               
chr11:17493313-17493637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 122
               

               
Conread position:
               
976-1225
               

               
Cow position:
               
chr11:55494519-55494770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
976-1319
               

               
Cow position:
               
chr11:6202286-6202641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
977-1232
               

               
Cow position:
               
chr11:31506688-31506947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
977-1332
               

               
Cow position:
               
chr11:69977819-69978163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
978-1332
               

               
Cow position:
               
chr11:63434214-63433866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
979-1191
               

               
Cow position:
               
chr11:41176107-41175892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
979-1246
               

               
Cow position:
               
chr11:40479012-40478743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
979-1249
               

               
Cow position:
               
chr11:16907200-16906936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
979-1249
               

               
Cow position:
               
chr11:30954841-30955115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
979-1337
               

               
Cow position:
               
chr11:30830773-30830420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 254
               

               
Conread position:
               
979-1337
               

               
Cow position:
               
chr11:75874909-75874569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
979-1339
               

               
Cow position:
               
chr11:71390721-71390369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
7, 207
               

               
Conread position:
               
979-1340
               

               
Cow position:
               
chr11:34646434-34646803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
979-1344
               

               
Cow position:
               
chr11:11646912-11647305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
980-1296
               

               
Cow position:
               
chr11:38670529-38670852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
982-1336
               

               
Cow position:
               
chr11:33287106-33286753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
982-1339
               

               
Cow position:
               
chr11:36058651-36059001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
983-1238
               

               
Cow position:
               
chr11:5314-5567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
985-1154
               

               
Cow position:
               
chr11:75918192-75918353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
985-1203
               

               
Cow position:
               
chr11:60143450-60143233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
985-1231
               

               
Cow position:
               
chr11:35775188-35775434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
985-1285
               

               
Cow position:
               
chr11:56187469-56187758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 147
               

               
Conread position:
               
985-1303
               

               
Cow position:
               
chr11:28993882-28993579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
985-1318
               

               
Cow position:
               
chr11:67600632-67600962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 244
               

               
Conread position:
               
985-1325
               

               
Cow position:
               
chr11:6245171-6245512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
985-1327
               

               
Cow position:
               
chr11:35213311-35212980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
985-1332
               

               
Cow position:
               
chr11:23272150-23271808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
238, 54
               

               
Conread position:
               
985-1333
               

               
Cow position:
               
chr11:18851768-18852104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
985-1334
               

               
Cow position:
               
chr11:48295882-48296227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
985-1337
               

               
Cow position:
               
chr11:3175540-3175871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
985-1339
               

               
Cow position:
               
chr11:45434936-45435280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
985-1339
               

               
Cow position:
               
chr11:80556070-80556423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
985-1339
               

               
Cow position:
               
chr11:80756934-80756587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
985-1344
               

               
Cow position:
               
chr11:66572652-66572279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
986-1317
               

               
Cow position:
               
chr11:32126461-32126799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
986-1318
               

               
Cow position:
               
chr11:32055334-32055001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
986-1319
               

               
Cow position:
               
chr11:21422085-21421753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
986-1342
               

               
Cow position:
               
chr11:64104208-64103843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
987-1125
               

               
Cow position:
               
chr11:70741124-70740986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
988-1318
               

               
Cow position:
               
chr11:49873034-49872703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
990-1250
               

               
Cow position:
               
chr11:40573478-40573222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
990-1325
               

               
Cow position:
               
chr11:37804700-37804361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
990-1331
               

               
Cow position:
               
chr11:49057257-49057579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
990-1335
               

               
Cow position:
               
chr11:23407316-23407662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 242
               

               
Conread position:
               
990-1344
               

               
Cow position:
               
chr11:63435372-63435732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 167
               

               
Conread position:
               
991-1249
               

               
Cow position:
               
chr11:69075764-69076023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
991-1327
               

               
Cow position:
               
chr11:63999234-63998895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
992-1295
               

               
Cow position:
               
chr11:64009575-64009887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
992-1342
               

               
Cow position:
               
chr11:2576047-2575700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
993-1327
               

               
Cow position:
               
chr11:50472174-50472511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
994-1319
               

               
Cow position:
               
chr11:70978868-70978550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
251, 50
               

               
Conread position:
               
995-1237
               

               
Cow position:
               
chr11:65767057-65767301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 232
               

               
Conread position:
               
995-1303
               

               
Cow position:
               
chr11:42296758-42296458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
995-1314
               

               
Cow position:
               
chr11:81135305-81134989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
996-1299
               

               
Cow position:
               
chr11:47772531-47772217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
996-1317
               

               
Cow position:
               
chr11:67615382-67615069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
996-1342
               

               
Cow position:
               
chr11:40395298-40395650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
6, 98
               

               
Conread position:
               
997-1288
               

               
Cow position:
               
chr11:48659793-48660084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 235
               

               
Conread position:
               
999-1332
               

               
Cow position:
               
chr11:261399-261060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
1000-1326
               

               
Cow position:
               
chr11:62788993-62789321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
1000-1333
               

               
Cow position:
               
chr11:76652887-76653221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
1000-1334
               

               
Cow position:
               
chr11:83925915-83926237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
1000-1335
               

               
Cow position:
               
chr11:38334391-38334721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
209, 86
               

               
Conread position:
               
1000-1344
               

               
Cow position:
               
chr11:40794486-40794140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
1002-1328
               

               
Cow position:
               
chr11:67615062-67614731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
1005-1226
               

               
Cow position:
               
chr11:64868145-64867929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
1005-1303
               

               
Cow position:
               
chr11:35981274-35980972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
1005-1340
               

               
Cow position:
               
chr11:62742763-62742441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
1006-1249
               

               
Cow position:
               
chr11:41293948-41293705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
1010-1315
               

               
Cow position:
               
chr11:40608722-40608412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
1010-1320
               

               
Cow position:
               
chr11:83032558-83032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1010-1326
               

               
Cow position:
               
chr11:5201765-5201454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
206, 30
               

               
Conread position:
               
1010-1331
               

               
Cow position:
               
chr11:47837188-47837518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
1010-1331
               

               
Cow position:
               
chr11:81168157-81167835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 176
               

               
Conread position:
               
1010-1341
               

               
Cow position:
               
chr11:70756356-70756678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
1011-1232
               

               
Cow position:
               
chr11:6194081-6194302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
1012-1242
               

               
Cow position:
               
chr11:33345320-33345551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 220
               

               
Conread position:
               
1012-1331
               

               
Cow position:
               
chr11:75285891-75285560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 201
               

               
Conread position:
               
1013-1317
               

               
Cow position:
               
chr11:42066738-42067047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1018-1245
               

               
Cow position:
               
chr11:63221222-63221460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
1019-1303
               

               
Cow position:
               
chr11:17036646-17036363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 210
               

               
Conread position:
               
1024-1246
               

               
Cow position:
               
chr11:26845706-26845485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 196
               

               
Conread position:
               
1024-1299
               

               
Cow position:
               
chr11:18910988-18910719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
1027-1320
               

               
Cow position:
               
chr11:3908718-3908428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
196, 60
               

               
Conread position:
               
1029-1185
               

               
Cow position:
               
chr11:11045140-11044982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
1030-1203
               

               
Cow position:
               
chr11:69392452-69392631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1030-1318
               

               
Cow position:
               
chr11:30493893-30494172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
1032-1236
               

               
Cow position:
               
chr11:32691067-32690871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
1032-1249
               

               
Cow position:
               
chr11:64406125-64406348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
1032-1344
               

               
Cow position:
               
chr11:16314769-16315082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
1034-1340
               

               
Cow position:
               
chr11:39060702-39060397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
1037-1316
               

               
Cow position:
               
chr11:33409356-33409084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1038-1291
               

               
Cow position:
               
chr11:42160158-42159902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 126
               

               
Conread position:
               
1038-1342
               

               
Cow position:
               
chr11:55911732-55911439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1040-1321
               

               
Cow position:
               
chr11:62813045-62812765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1040-1338
               

               
Cow position:
               
chr11:36914661-36914363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
186, 284
               

               
Conread position:
               
1041-1344
               

               
Cow position:
               
chr11:36977713-36978015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
1042-1338
               

               
Cow position:
               
chr11:35665654-35665357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
1043-1327
               

               
Cow position:
               
chr11:1067533-1067246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 262
               

               
Conread position:
               
1044-1249
               

               
Cow position:
               
chr11:35803044-35803249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
1044-1279
               

               
Cow position:
               
chr11:19946346-19946572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
1044-1318
               

               
Cow position:
               
chr11:17676460-17676191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1044-1319
               

               
Cow position:
               
chr11:41603779-41603516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
1044-1335
               

               
Cow position:
               
chr11:35536498-35536775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1044-1342
               

               
Cow position:
               
chr11:30370018-30370310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
1044-1342
               

               
Cow position:
               
chr11:58594477-58594180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
1045-1270
               

               
Cow position:
               
chr11:72884675-72884466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1045-1326
               

               
Cow position:
               
chr11:32398548-32398833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
1046-1232
               

               
Cow position:
               
chr11:19586367-19586557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
1046-1339
               

               
Cow position:
               
chr11:8437777-8437484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
182, 43
               

               
Conread position:
               
1049-1248
               

               
Cow position:
               
chr11:22747414-22747219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
1050-1225
               

               
Cow position:
               
chr11:82740424-82740600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1052-1175
               

               
Cow position:
               
chr11:1779411-1779288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
1052-1199
               

               
Cow position:
               
chr11:54218635-54218779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1052-1221
               

               
Cow position:
               
chr11:53279796-53279628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
1052-1318
               

               
Cow position:
               
chr11:72292461-72292745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1052-1328
               

               
Cow position:
               
chr11:46922980-46922693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 189
               

               
Conread position:
               
1052-1339
               

               
Cow position:
               
chr11:63866736-63866454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
157, 29
               

               
Conread position:
               
1053-1224
               

               
Cow position:
               
chr11:28168505-28168333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1053-1319
               

               
Cow position:
               
chr11:17721885-17721616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1054-1286
               

               
Cow position:
               
chr11:31410963-31410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
1054-1339
               

               
Cow position:
               
chr11:62578722-62579008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 214
               

               
Conread position:
               
1058-1314
               

               
Cow position:
               
chr11:30867105-30867357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
1058-1319
               

               
Cow position:
               
chr11:4637249-4636990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
1060-1338
               

               
Cow position:
               
chr11:953282-953563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1061-1339
               

               
Cow position:
               
chr11:20194502-20194219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1062-1221
               

               
Cow position:
               
chr11:30483845-30484006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1064-1249
               

               
Cow position:
               
chr11:48248286-48248101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1065-1338
               

               
Cow position:
               
chr11:55636299-55636022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
1068-1344
               

               
Cow position:
               
chr11:68555160-68554878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
1070-1302
               

               
Cow position:
               
chr11:25119997-25119768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
1071-1343
               

               
Cow position:
               
chr11:1932556-1932280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 249
               

               
Conread position:
               
1074-1238
               

               
Cow position:
               
chr11:34413398-34413238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1075-1319
               

               
Cow position:
               
chr11:41438244-41438000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
1075-1336
               

               
Cow position:
               
chr11:45619293-45619551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1076-1303
               

               
Cow position:
               
chr11:39855072-39854853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1077-1335
               

               
Cow position:
               
chr11:68883664-68883922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
1080-1293
               

               
Cow position:
               
chr11:39620094-39619892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
1081-1317
               

               
Cow position:
               
chr11:18447547-18447318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
1082-1341
               

               
Cow position:
               
chr11:35562669-35562927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
1083-1243
               

               
Cow position:
               
chr11:36329086-36328931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1086-1280
               

               
Cow position:
               
chr11:84977407-84977219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 143
               

               
Conread position:
               
1086-1319
               

               
Cow position:
               
chr11:18924697-18924932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
1086-1334
               

               
Cow position:
               
chr11:897625-897864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1087-1324
               

               
Cow position:
               
chr11:21885786-21886020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
156, 88
               

               
Conread position:
               
1090-1315
               

               
Cow position:
               
chr11:29786542-29786312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
1095-1325
               

               
Cow position:
               
chr11:38211606-38211832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
1099-1336
               

               
Cow position:
               
chr11:30895039-30894800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
117, 141
               

               
Conread position:
               
1101-1317
               

               
Cow position:
               
chr11:15382536-15382312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1101-1342
               

               
Cow position:
               
chr11:5219193-5218954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
1103-1340
               

               
Cow position:
               
chr11:34968645-34968409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
1104-1341
               

               
Cow position:
               
chr11:30172279-30172504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1106-1317
               

               
Cow position:
               
chr11:2900749-2900530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1106-1327
               

               
Cow position:
               
chr11:30843047-30842831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
216, 112
               

               
Conread position:
               
1106-1341
               

               
Cow position:
               
chr11:43914263-43914498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 120
               

               
Conread position:
               
1107-1321
               

               
Cow position:
               
chr11:20205879-20205671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1108-1319
               

               
Cow position:
               
chr11:63165673-63165466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1110-1331
               

               
Cow position:
               
chr11:47784750-47784976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 211
               

               
Conread position:
               
1114-1335
               

               
Cow position:
               
chr11:56114918-56115141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
1117-1335
               

               
Cow position:
               
chr11:48315414-48315197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
202, 110
               

               
Conread position:
               
1119-1335
               

               
Cow position:
               
chr11:66685922-66685710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
1120-1342
               

               
Cow position:
               
chr11:63478363-63478570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1121-1331
               

               
Cow position:
               
chr11:30986628-30986835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
1123-1344
               

               
Cow position:
               
chr11:6256014-6255800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1128-1326
               

               
Cow position:
               
chr11:22884407-22884597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1132-1342
               

               
Cow position:
               
chr11:2484797-2484587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
1132-1343
               

               
Cow position:
               
chr11:6320135-6319920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1136-1331
               

               
Cow position:
               
chr11:80008066-80007863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
1136-1338
               

               
Cow position:
               
chr11:36092915-36092716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
1145-1329
               

               
Cow position:
               
chr11:69676342-69676158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
1148-1286
               

               
Cow position:
               
chr11:4411855-4411721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1148-1330
               

               
Cow position:
               
chr11:37041985-37042171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
1148-1331
               

               
Cow position:
               
chr11:74839624-74839798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1332
               

               
Cow position:
               
chr11:42206435-42206618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
171, 79
               

               
Conread position:
               
1148-1333
               

               
Cow position:
               
chr11:25721981-25721807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1148-1343
               

               
Cow position:
               
chr11:44615154-44614955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1149-1320
               

               
Cow position:
               
chr11:54872745-54872575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
1149-1331
               

               
Cow position:
               
chr11:53651655-53651840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 79
               

               
Conread position:
               
1149-1333
               

               
Cow position:
               
chr11:15591460-15591281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1153-1321
               

               
Cow position:
               
chr11:63483961-63484128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
1157-1332
               

               
Cow position:
               
chr11:30857060-30857233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
1157-1334
               

               
Cow position:
               
chr11:80399871-80400050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
1157-1344
               

               
Cow position:
               
chr11:4621408-4621225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1161-1338
               

               
Cow position:
               
chr11:37564900-37565073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1166-1340
               

               
Cow position:
               
chr11:65431550-65431724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
1168-1320
               

               
Cow position:
               
chr11:12768432-12768582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1168-1340
               

               
Cow position:
               
chr11:70821078-70821249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
1171-1331
               

               
Cow position:
               
chr11:81340504-81340346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
1178-1333
               

               
Cow position:
               
chr11:63977101-63977254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.