• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
821-1303
               

               
Cow position:
               
chr12:42879372-42879846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 39
               

               
Conread position:
               
827-1117
               

               
Cow position:
               
chr12:46143486-46143784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
828-1067
               

               
Cow position:
               
chr12:22749124-22749363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
828-1319
               

               
Cow position:
               
chr12:30578793-30578294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
828-1331
               

               
Cow position:
               
chr12:19697078-19697568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
830-945
               

               
Cow position:
               
chr12:25821049-25820936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
830-1159
               

               
Cow position:
               
chr12:44014172-44013836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
831-985
               

               
Cow position:
               
chr12:30946499-30946656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
831-1126
               

               
Cow position:
               
chr12:41336794-41336488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
831-1249
               

               
Cow position:
               
chr12:2711161-2711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
831-1289
               

               
Cow position:
               
chr12:37770540-37770999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
832-1088
               

               
Cow position:
               
chr12:8172840-8173101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
832-1141
               

               
Cow position:
               
chr12:2242219-2241903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
832-1186
               

               
Cow position:
               
chr12:20312497-20312142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
832-1249
               

               
Cow position:
               
chr12:34148681-34148266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
832-1320
               

               
Cow position:
               
chr12:21393367-21393874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
65, 143
               

               
Conread position:
               
832-1325
               

               
Cow position:
               
chr12:16359543-16360039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 231
               

               
Conread position:
               
833-1062
               

               
Cow position:
               
chr12:5134809-5135053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
833-1181
               

               
Cow position:
               
chr12:15259042-15258691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
833-1303
               

               
Cow position:
               
chr12:12199235-12198762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
834-1035
               

               
Cow position:
               
chr12:37123184-37123390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 96
               

               
Conread position:
               
834-1077
               

               
Cow position:
               
chr12:35218733-35218481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
834-1153
               

               
Cow position:
               
chr12:23440867-23440536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 270
               

               
Conread position:
               
834-1163
               

               
Cow position:
               
chr12:1343425-1343102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
834-1321
               

               
Cow position:
               
chr12:18577517-18577992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
834-1340
               

               
Cow position:
               
chr12:10895877-10895369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 126
               

               
Conread position:
               
834-1340
               

               
Cow position:
               
chr12:18123358-18123853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
835-981
               

               
Cow position:
               
chr12:3372365-3372510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
835-1080
               

               
Cow position:
               
chr12:12017545-12017805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
835-1237
               

               
Cow position:
               
chr12:2286253-2286661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 254
               

               
Conread position:
               
835-1331
               

               
Cow position:
               
chr12:30170335-30170825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 384
               

               
Conread position:
               
836-958
               

               
Cow position:
               
chr12:4719258-4719381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
836-1043
               

               
Cow position:
               
chr12:27808801-27808592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
836-1343
               

               
Cow position:
               
chr12:35310999-35310495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
837-1162
               

               
Cow position:
               
chr12:45065508-45065828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 129
               

               
Conread position:
               
839-986
               

               
Cow position:
               
chr12:1475819-1475672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
839-1007
               

               
Cow position:
               
chr12:11102179-11102346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
148, 157
               

               
Conread position:
               
841-940
               

               
Cow position:
               
chr12:15160436-15160534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
841-952
               

               
Cow position:
               
chr12:13018111-13018000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-982
               

               
Cow position:
               
chr12:38774927-38775068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr12:3196931-3197073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
841-1080
               

               
Cow position:
               
chr12:22261136-22260896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
841-1105
               

               
Cow position:
               
chr12:17472542-17472274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 124
               

               
Conread position:
               
841-1157
               

               
Cow position:
               
chr12:3578958-3579288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
841-1166
               

               
Cow position:
               
chr12:1245972-1246310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
111, 292
               

               
Conread position:
               
841-1224
               

               
Cow position:
               
chr12:6489295-6488924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
841-1232
               

               
Cow position:
               
chr12:31429878-31429495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 34
               

               
Conread position:
               
841-1235
               

               
Cow position:
               
chr12:9229806-9229420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 214
               

               
Conread position:
               
841-1316
               

               
Cow position:
               
chr12:31228257-31228743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
841-1327
               

               
Cow position:
               
chr12:42966679-42967166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
841-1336
               

               
Cow position:
               
chr12:39486108-39486610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
842-945
               

               
Cow position:
               
chr12:45679810-45679913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-955
               

               
Cow position:
               
chr12:43192507-43192394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-970
               

               
Cow position:
               
chr12:8487651-8487523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-972
               

               
Cow position:
               
chr12:38111409-38111538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr12:27123224-27123085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr12:17099101-17099241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr12:39158611-39158471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr12:28789574-28789717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr12:29119577-29119717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr12:4914122-4913974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr12:35136198-35136345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 121
               

               
Conread position:
               
842-1006
               

               
Cow position:
               
chr12:37514552-37514389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
842-1011
               

               
Cow position:
               
chr12:15089170-15089342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
842-1014
               

               
Cow position:
               
chr12:37481451-37481284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
842-1036
               

               
Cow position:
               
chr12:12976507-12976297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
842-1056
               

               
Cow position:
               
chr12:31925333-31925550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
842-1081
               

               
Cow position:
               
chr12:9465781-9465535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
842-1084
               

               
Cow position:
               
chr12:9414087-9413851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
214, 41
               

               
Conread position:
               
842-1090
               

               
Cow position:
               
chr12:19420253-19419998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 86
               

               
Conread position:
               
842-1094
               

               
Cow position:
               
chr12:6136901-6136638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr12:25259822-25259559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr12:35807355-35807618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 245
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr12:41979620-41979356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr12:24755345-24755094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr12:45802020-45801766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr12:16851329-16851059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr12:1883828-1883562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr12:29486796-29487066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
135, 248
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr12:42351770-42352040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
130, 141
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr12:10602874-10603155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr12:18937066-18937367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr12:3039193-3039482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 112
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr12:5813402-5813700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr12:13042309-13042018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 157
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr12:22932885-22932587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 262
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr12:30143468-30143766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr12:19039938-19039634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr12:24440491-24440791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 255
               

               
Conread position:
               
842-1133
               

               
Cow position:
               
chr12:3070789-3071087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
141, 107
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr12:41376335-41376043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
215, 88
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr12:4116184-4116474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr12:28572382-28572672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 42
               

               
Conread position:
               
842-1148
               

               
Cow position:
               
chr12:30593179-30592861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1178
               

               
Cow position:
               
chr12:28011220-28010886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 238
               

               
Conread position:
               
842-1216
               

               
Cow position:
               
chr12:44905316-44905688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr12:40807075-40807468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
145, 205
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr12:25312698-25312305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 237
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr12:19869150-19869531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 252
               

               
Conread position:
               
842-1235
               

               
Cow position:
               
chr12:47803834-47804236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr12:27055286-27055686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr12:7311087-7311470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr12:44596135-44595722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr12:18020531-18020951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr12:18572316-18572720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr12:41580796-41581207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr12:1773984-1773567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr12:29969258-29969677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
842-1281
               

               
Cow position:
               
chr12:4008606-4008155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
842-1291
               

               
Cow position:
               
chr12:27563698-27563241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
842-1295
               

               
Cow position:
               
chr12:5632195-5631745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 204
               

               
Conread position:
               
842-1299
               

               
Cow position:
               
chr12:20316827-20316385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr12:9710526-9710058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr12:4342042-4341573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr12:18421247-18420755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr12:22516057-22515568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr12:26869117-26868643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr12:15429921-15429418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 388
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr12:46714071-46714551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
207, 107
               

               
Conread position:
               
842-1333
               

               
Cow position:
               
chr12:7205925-7205449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr12:6240986-6241507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 179
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr12:9482616-9482122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr12:36118650-36119148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr12:42602557-42602051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr12:36501268-36500760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr12:21314701-21315206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
125, 193
               

               
Conread position:
               
843-1285
               

               
Cow position:
               
chr12:33323818-33323365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
843-1320
               

               
Cow position:
               
chr12:35771353-35770860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 268
               

               
Conread position:
               
843-1327
               

               
Cow position:
               
chr12:44622036-44622533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 121
               

               
Conread position:
               
843-1344
               

               
Cow position:
               
chr12:1889908-1889392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
844-981
               

               
Cow position:
               
chr12:23909056-23908920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
844-1230
               

               
Cow position:
               
chr12:21045375-21044992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
844-1330
               

               
Cow position:
               
chr12:34466316-34465844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
844-1337
               

               
Cow position:
               
chr12:1006148-1005668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
845-975
               

               
Cow position:
               
chr12:21619997-21619868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
845-982
               

               
Cow position:
               
chr12:38832510-38832373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-1067
               

               
Cow position:
               
chr12:3880577-3880339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
845-1089
               

               
Cow position:
               
chr12:27928792-27928537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 237
               

               
Conread position:
               
845-1203
               

               
Cow position:
               
chr12:34673647-34673292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr12:30753409-30753813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
845-1299
               

               
Cow position:
               
chr12:15122024-15122468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
845-1320
               

               
Cow position:
               
chr12:43788712-43789190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 207
               

               
Conread position:
               
845-1341
               

               
Cow position:
               
chr12:36313548-36314025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
845-1343
               

               
Cow position:
               
chr12:42181459-42180940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 401
               

               
Conread position:
               
845-1344
               

               
Cow position:
               
chr12:40910608-40910096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
846-1000
               

               
Cow position:
               
chr12:3600213-3600052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
846-1336
               

               
Cow position:
               
chr12:6469361-6468892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
847-957
               

               
Cow position:
               
chr12:23446113-23446222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
847-971
               

               
Cow position:
               
chr12:45630124-45629998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
847-981
               

               
Cow position:
               
chr12:27039082-27038950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
847-992
               

               
Cow position:
               
chr12:35754961-35754816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-1036
               

               
Cow position:
               
chr12:747924-748108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
847-1074
               

               
Cow position:
               
chr12:40158555-40158318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
847-1080
               

               
Cow position:
               
chr12:3568631-3568871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
847-1080
               

               
Cow position:
               
chr12:21088647-21088401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
847-1085
               

               
Cow position:
               
chr12:19872122-19872358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
847-1086
               

               
Cow position:
               
chr12:36568367-36568128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
847-1107
               

               
Cow position:
               
chr12:18011118-18011387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
119, 175
               

               
Conread position:
               
847-1113
               

               
Cow position:
               
chr12:32786307-32786040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
847-1182
               

               
Cow position:
               
chr12:20326455-20326801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
847-1208
               

               
Cow position:
               
chr12:19664831-19664480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
847-1211
               

               
Cow position:
               
chr12:12304085-12304436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
847-1222
               

               
Cow position:
               
chr12:29484207-29483819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
847-1233
               

               
Cow position:
               
chr12:19691551-19691156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
847-1235
               

               
Cow position:
               
chr12:7977731-7978115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 111
               

               
Conread position:
               
847-1278
               

               
Cow position:
               
chr12:42254342-42254791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 121
               

               
Conread position:
               
847-1279
               

               
Cow position:
               
chr12:19154927-19154495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
847-1297
               

               
Cow position:
               
chr12:4370917-4371389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
847-1318
               

               
Cow position:
               
chr12:17881556-17882017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
847-1318
               

               
Cow position:
               
chr12:41216743-41217230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 146
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr12:9143076-9143554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 202
               

               
Conread position:
               
847-1325
               

               
Cow position:
               
chr12:31060299-31059810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 266
               

               
Conread position:
               
847-1338
               

               
Cow position:
               
chr12:19508888-19508384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 250
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr12:15938583-15938085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr12:31529976-31530486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
847-1342
               

               
Cow position:
               
chr12:7960878-7960401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 7
               

               
Conread position:
               
848-984
               

               
Cow position:
               
chr12:3160749-3160887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
848-1089
               

               
Cow position:
               
chr12:40868269-40868521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
139, 203
               

               
Conread position:
               
848-1096
               

               
Cow position:
               
chr12:36572127-36572386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
848-1140
               

               
Cow position:
               
chr12:11583091-11583375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
848-1150
               

               
Cow position:
               
chr12:34385829-34385512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
848-1186
               

               
Cow position:
               
chr12:30596148-30596499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
848-1192
               

               
Cow position:
               
chr12:1223657-1223308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
848-1202
               

               
Cow position:
               
chr12:45814579-45814215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
848-1216
               

               
Cow position:
               
chr12:18943965-18943597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
848-1222
               

               
Cow position:
               
chr12:30437936-30438304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
848-1232
               

               
Cow position:
               
chr12:17000947-17001335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
848-1235
               

               
Cow position:
               
chr12:46333058-46333422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
848-1242
               

               
Cow position:
               
chr12:30605471-30605081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 138
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr12:2812912-2813322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr12:31959578-31959971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
848-1330
               

               
Cow position:
               
chr12:34473924-34473433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
848-1331
               

               
Cow position:
               
chr12:30745398-30745894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 115
               

               
Conread position:
               
848-1332
               

               
Cow position:
               
chr12:25561056-25561544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
848-1339
               

               
Cow position:
               
chr12:27803362-27802876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
848-1341
               

               
Cow position:
               
chr12:26782566-26783057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 212
               

               
Conread position:
               
849-1027
               

               
Cow position:
               
chr12:26777466-26777283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
849-1045
               

               
Cow position:
               
chr12:46635257-46635055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
849-1216
               

               
Cow position:
               
chr12:29995776-29995403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 253
               

               
Conread position:
               
849-1242
               

               
Cow position:
               
chr12:45160826-45160431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
151, 135
               

               
Conread position:
               
849-1251
               

               
Cow position:
               
chr12:5800724-5801139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
849-1320
               

               
Cow position:
               
chr12:11056562-11057030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 182
               

               
Conread position:
               
849-1321
               

               
Cow position:
               
chr12:17079944-17080431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
849-1324
               

               
Cow position:
               
chr12:19125141-19124663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
117, 180
               

               
Conread position:
               
850-1225
               

               
Cow position:
               
chr12:24559039-24559428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
850-1318
               

               
Cow position:
               
chr12:30919119-30919596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
850-1319
               

               
Cow position:
               
chr12:19865929-19866409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
850-1325
               

               
Cow position:
               
chr12:10461693-10462160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
851-1008
               

               
Cow position:
               
chr12:39502096-39502247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
851-1126
               

               
Cow position:
               
chr12:17495504-17495237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 109
               

               
Conread position:
               
851-1224
               

               
Cow position:
               
chr12:29448335-29448717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
852-975
               

               
Cow position:
               
chr12:17486448-17486325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
852-1089
               

               
Cow position:
               
chr12:24511687-24511447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 222
               

               
Conread position:
               
852-1330
               

               
Cow position:
               
chr12:30805543-30806025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 247
               

               
Conread position:
               
852-1338
               

               
Cow position:
               
chr12:30728551-30728063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
853-1319
               

               
Cow position:
               
chr12:18518361-18518835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 188
               

               
Conread position:
               
853-1342
               

               
Cow position:
               
chr12:7884965-7884496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
854-1083
               

               
Cow position:
               
chr12:18076225-18076463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
856-1222
               

               
Cow position:
               
chr12:33457843-33458214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
857-1130
               

               
Cow position:
               
chr12:1284764-1284487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 214
               

               
Conread position:
               
857-1332
               

               
Cow position:
               
chr12:41083760-41084225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
858-1140
               

               
Cow position:
               
chr12:8922094-8921803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
859-1047
               

               
Cow position:
               
chr12:5863275-5863465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
859-1117
               

               
Cow position:
               
chr12:44766779-44767038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
859-1155
               

               
Cow position:
               
chr12:8123106-8123409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
124, 240
               

               
Conread position:
               
859-1220
               

               
Cow position:
               
chr12:16543872-16543515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
859-1231
               

               
Cow position:
               
chr12:18769380-18768995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
22, 312
               

               
Conread position:
               
859-1243
               

               
Cow position:
               
chr12:6210461-6210071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 182
               

               
Conread position:
               
859-1246
               

               
Cow position:
               
chr12:6720018-6720416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 25
               

               
Conread position:
               
859-1279
               

               
Cow position:
               
chr12:41159293-41159713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
859-1279
               

               
Cow position:
               
chr12:47928910-47929321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
859-1302
               

               
Cow position:
               
chr12:48415815-48415374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
859-1325
               

               
Cow position:
               
chr12:21922132-21922608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
859-1331
               

               
Cow position:
               
chr12:36012912-36012436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
859-1341
               

               
Cow position:
               
chr12:30590473-30590951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
860-985
               

               
Cow position:
               
chr12:38678396-38678520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
860-1035
               

               
Cow position:
               
chr12:7108885-7109071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
860-1131
               

               
Cow position:
               
chr12:28650654-28650933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr12:2669974-2670251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr12:29411787-29411504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
860-1183
               

               
Cow position:
               
chr12:3055831-3056160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
860-1243
               

               
Cow position:
               
chr12:44518040-44517652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
860-1248
               

               
Cow position:
               
chr12:45820660-45820275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
860-1302
               

               
Cow position:
               
chr12:37994028-37993576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
860-1303
               

               
Cow position:
               
chr12:8943525-8943068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
861-1045
               

               
Cow position:
               
chr12:40307394-40307587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
861-1282
               

               
Cow position:
               
chr12:42167344-42167757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
861-1294
               

               
Cow position:
               
chr12:3076925-3076486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 199
               

               
Conread position:
               
862-1043
               

               
Cow position:
               
chr12:36954676-36954487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
862-1117
               

               
Cow position:
               
chr12:24032705-24032967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 239
               

               
Conread position:
               
862-1251
               

               
Cow position:
               
chr12:15530764-15531151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
862-1295
               

               
Cow position:
               
chr12:4866515-4866953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
862-1320
               

               
Cow position:
               
chr12:6411029-6410572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 230
               

               
Conread position:
               
863-978
               

               
Cow position:
               
chr12:7882021-7881906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
863-1254
               

               
Cow position:
               
chr12:14132044-14131671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
864-1056
               

               
Cow position:
               
chr12:6687570-6687762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
864-1168
               

               
Cow position:
               
chr12:3510266-3510575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
865-1096
               

               
Cow position:
               
chr12:40270384-40270149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 75
               

               
Conread position:
               
865-1169
               

               
Cow position:
               
chr12:6164327-6164008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
865-1169
               

               
Cow position:
               
chr12:26317161-26317479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
865-1317
               

               
Cow position:
               
chr12:25805408-25804984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 103
               

               
Conread position:
               
865-1319
               

               
Cow position:
               
chr12:5714331-5714781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
865-1341
               

               
Cow position:
               
chr12:11835944-11836414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
866-1343
               

               
Cow position:
               
chr12:16605943-16605485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 178
               

               
Conread position:
               
869-984
               

               
Cow position:
               
chr12:25529736-25529851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
869-1230
               

               
Cow position:
               
chr12:46314989-46314629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
869-1249
               

               
Cow position:
               
chr12:41473801-41474181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 196
               

               
Conread position:
               
869-1303
               

               
Cow position:
               
chr12:41091235-41091682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 192
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr12:9892810-9892695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
870-1077
               

               
Cow position:
               
chr12:1848831-1848611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
870-1085
               

               
Cow position:
               
chr12:48437197-48436981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
870-1094
               

               
Cow position:
               
chr12:18081836-18081610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
870-1106
               

               
Cow position:
               
chr12:17007904-17008155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
113, 172
               

               
Conread position:
               
870-1126
               

               
Cow position:
               
chr12:32391552-32391819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 235
               

               
Conread position:
               
870-1131
               

               
Cow position:
               
chr12:25455821-25456095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
870-1222
               

               
Cow position:
               
chr12:5905764-5906123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 148
               

               
Conread position:
               
870-1225
               

               
Cow position:
               
chr12:31198475-31198837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
870-1235
               

               
Cow position:
               
chr12:28582785-28582429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
870-1242
               

               
Cow position:
               
chr12:19715320-19714954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
870-1249
               

               
Cow position:
               
chr12:3950644-3950252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 372
               

               
Conread position:
               
870-1262
               

               
Cow position:
               
chr12:9914496-9914900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 229
               

               
Conread position:
               
870-1285
               

               
Cow position:
               
chr12:31532694-31532277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
870-1306
               

               
Cow position:
               
chr12:17270250-17270687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 79
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr12:20777222-20776766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr12:34007006-34007462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 233
               

               
Conread position:
               
870-1344
               

               
Cow position:
               
chr12:35368350-35368831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 228
               

               
Conread position:
               
871-1100
               

               
Cow position:
               
chr12:34103427-34103190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 164
               

               
Conread position:
               
871-1249
               

               
Cow position:
               
chr12:11109478-11109844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
871-1272
               

               
Cow position:
               
chr12:20479604-20479221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
871-1328
               

               
Cow position:
               
chr12:17031329-17031781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
871-1341
               

               
Cow position:
               
chr12:18040883-18040422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
872-985
               

               
Cow position:
               
chr12:3093285-3093173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
872-1249
               

               
Cow position:
               
chr12:20849723-20850086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
872-1313
               

               
Cow position:
               
chr12:32169245-32169703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
873-1047
               

               
Cow position:
               
chr12:36042023-36041838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
873-1069
               

               
Cow position:
               
chr12:4134375-4134586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
873-1279
               

               
Cow position:
               
chr12:36020766-36020354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 86
               

               
Conread position:
               
873-1331
               

               
Cow position:
               
chr12:15358038-15358517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 234
               

               
Conread position:
               
874-1214
               

               
Cow position:
               
chr12:40110100-40110430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
874-1216
               

               
Cow position:
               
chr12:8869172-8868821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
874-1242
               

               
Cow position:
               
chr12:26223274-26222900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
874-1246
               

               
Cow position:
               
chr12:32714752-32715135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
875-1199
               

               
Cow position:
               
chr12:1504739-1505064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
875-1321
               

               
Cow position:
               
chr12:19502708-19502248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 175
               

               
Conread position:
               
876-1131
               

               
Cow position:
               
chr12:41214605-41214345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
877-1343
               

               
Cow position:
               
chr12:22285386-22284935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
878-1109
               

               
Cow position:
               
chr12:38010330-38010107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
878-1130
               

               
Cow position:
               
chr12:22047185-22047445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
878-1172
               

               
Cow position:
               
chr12:941347-941657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
878-1175
               

               
Cow position:
               
chr12:12178636-12178943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
101, 192
               

               
Conread position:
               
878-1178
               

               
Cow position:
               
chr12:23154751-23154455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
878-1232
               

               
Cow position:
               
chr12:37727862-37728221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
878-1250
               

               
Cow position:
               
chr12:37733062-37732686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
878-1325
               

               
Cow position:
               
chr12:3473275-3472825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 216
               

               
Conread position:
               
878-1341
               

               
Cow position:
               
chr12:43476070-43476538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 156
               

               
Conread position:
               
879-1332
               

               
Cow position:
               
chr12:18388566-18388111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 175
               

               
Conread position:
               
881-1203
               

               
Cow position:
               
chr12:5797826-5797514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
881-1249
               

               
Cow position:
               
chr12:42698506-42698154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 190
               

               
Conread position:
               
882-1248
               

               
Cow position:
               
chr12:25320642-25321009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 208
               

               
Conread position:
               
883-1178
               

               
Cow position:
               
chr12:8104524-8104233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
883-1199
               

               
Cow position:
               
chr12:17716803-17717109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
884-1279
               

               
Cow position:
               
chr12:43942200-43942595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
885-1140
               

               
Cow position:
               
chr12:44846115-44846371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
886-1159
               

               
Cow position:
               
chr12:34429420-34429152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
886-1232
               

               
Cow position:
               
chr12:29780179-29779837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
886-1338
               

               
Cow position:
               
chr12:15783656-15784106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 96
               

               
Conread position:
               
886-1344
               

               
Cow position:
               
chr12:34332829-34333303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
887-1279
               

               
Cow position:
               
chr12:30662226-30661826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 196
               

               
Conread position:
               
890-1344
               

               
Cow position:
               
chr12:39465305-39465754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 166
               

               
Conread position:
               
891-1249
               

               
Cow position:
               
chr12:28257318-28256965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
892-1160
               

               
Cow position:
               
chr12:8710560-8710826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
892-1344
               

               
Cow position:
               
chr12:44602233-44602697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
893-1225
               

               
Cow position:
               
chr12:12331771-12331440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
893-1238
               

               
Cow position:
               
chr12:25177864-25177517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 202
               

               
Conread position:
               
895-1124
               

               
Cow position:
               
chr12:17702501-17702257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 130
               

               
Conread position:
               
898-1332
               

               
Cow position:
               
chr12:42283102-42282663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
899-1117
               

               
Cow position:
               
chr12:24107802-24107583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
901-1084
               

               
Cow position:
               
chr12:29162073-29161885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
901-1090
               

               
Cow position:
               
chr12:6226908-6226711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
901-1251
               

               
Cow position:
               
chr12:18766243-18765877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
901-1299
               

               
Cow position:
               
chr12:23574507-23574913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
904-1236
               

               
Cow position:
               
chr12:5940084-5940423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 180
               

               
Conread position:
               
904-1248
               

               
Cow position:
               
chr12:17774546-17774885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 149
               

               
Conread position:
               
906-1249
               

               
Cow position:
               
chr12:15240981-15240642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 178
               

               
Conread position:
               
906-1303
               

               
Cow position:
               
chr12:5635705-5635305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 169
               

               
Conread position:
               
909-1327
               

               
Cow position:
               
chr12:24024045-24023640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
910-1251
               

               
Cow position:
               
chr12:23797850-23798193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
911-1222
               

               
Cow position:
               
chr12:28213266-28213576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
916-1305
               

               
Cow position:
               
chr12:20075340-20075729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
917-1226
               

               
Cow position:
               
chr12:24211170-24211478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
919-1186
               

               
Cow position:
               
chr12:731179-730905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 197
               

               
Conread position:
               
919-1249
               

               
Cow position:
               
chr12:29770817-29770487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
920-1308
               

               
Cow position:
               
chr12:42954137-42953745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
922-1252
               

               
Cow position:
               
chr12:28471398-28471744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1216
               

               
Cow position:
               
chr12:35377961-35378262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 252
               

               
Conread position:
               
925-1248
               

               
Cow position:
               
chr12:27037686-27037357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
926-1249
               

               
Cow position:
               
chr12:24577491-24577157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
926-1291
               

               
Cow position:
               
chr12:35669703-35669334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
926-1326
               

               
Cow position:
               
chr12:25917509-25917110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
927-1343
               

               
Cow position:
               
chr12:18103830-18103431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
930-1247
               

               
Cow position:
               
chr12:15162916-15163229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
931-1332
               

               
Cow position:
               
chr12:24662883-24663293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
932-1154
               

               
Cow position:
               
chr12:38454687-38454908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
932-1213
               

               
Cow position:
               
chr12:12579256-12578977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 153
               

               
Conread position:
               
932-1327
               

               
Cow position:
               
chr12:29899668-29899247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 294
               

               
Conread position:
               
932-1340
               

               
Cow position:
               
chr12:25280721-25280319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
933-1134
               

               
Cow position:
               
chr12:38512072-38511857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
934-1131
               

               
Cow position:
               
chr12:25820662-25820454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
935-1294
               

               
Cow position:
               
chr12:28748706-28749082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 243
               

               
Conread position:
               
936-1285
               

               
Cow position:
               
chr12:15763137-15762782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
942-1332
               

               
Cow position:
               
chr12:31947902-31948289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
942-1337
               

               
Cow position:
               
chr12:33129043-33129436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
944-1282
               

               
Cow position:
               
chr12:38053625-38053977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
945-1338
               

               
Cow position:
               
chr12:13643014-13643415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
948-1344
               

               
Cow position:
               
chr12:42162828-42163226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
950-1299
               

               
Cow position:
               
chr12:33851142-33851499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 200
               

               
Conread position:
               
963-1192
               

               
Cow position:
               
chr12:10491079-10491308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
968-1319
               

               
Cow position:
               
chr12:12300730-12301091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
977-1327
               

               
Cow position:
               
chr12:15050800-15050455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
978-1285
               

               
Cow position:
               
chr12:35123713-35124021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
979-1203
               

               
Cow position:
               
chr12:25452622-25452399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
979-1284
               

               
Cow position:
               
chr12:45965430-45965137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
979-1319
               

               
Cow position:
               
chr12:33976023-33976366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
979-1321
               

               
Cow position:
               
chr12:26218005-26217662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
979-1333
               

               
Cow position:
               
chr12:12637366-12637008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 221
               

               
Conread position:
               
979-1334
               

               
Cow position:
               
chr12:15089336-15089694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 205
               

               
Conread position:
               
979-1342
               

               
Cow position:
               
chr12:19507454-19507824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
980-1249
               

               
Cow position:
               
chr12:25444748-25445009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
981-1287
               

               
Cow position:
               
chr12:20636334-20636019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
982-1335
               

               
Cow position:
               
chr12:1998974-1998619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
982-1344
               

               
Cow position:
               
chr12:30804150-30803792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
985-1317
               

               
Cow position:
               
chr12:17879474-17879144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
985-1319
               

               
Cow position:
               
chr12:30210311-30210633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 245
               

               
Conread position:
               
985-1319
               

               
Cow position:
               
chr12:36544820-36544481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
985-1326
               

               
Cow position:
               
chr12:15703668-15703323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
985-1337
               

               
Cow position:
               
chr12:23916671-23917019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
985-1344
               

               
Cow position:
               
chr12:38774411-38774058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
986-1226
               

               
Cow position:
               
chr12:23855667-23855903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
986-1317
               

               
Cow position:
               
chr12:8759150-8759493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
986-1322
               

               
Cow position:
               
chr12:4768756-4769086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
986-1327
               

               
Cow position:
               
chr12:42685117-42684765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 341
               

               
Conread position:
               
986-1331
               

               
Cow position:
               
chr12:28131414-28131765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
987-1295
               

               
Cow position:
               
chr12:15415042-15414731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
987-1343
               

               
Cow position:
               
chr12:6242345-6241990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
990-1188
               

               
Cow position:
               
chr12:18420304-18420503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
990-1342
               

               
Cow position:
               
chr12:22485647-22485999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
990-1343
               

               
Cow position:
               
chr12:42784141-42784494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 242
               

               
Conread position:
               
991-1249
               

               
Cow position:
               
chr12:6485372-6485120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
993-1303
               

               
Cow position:
               
chr12:30194543-30194840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
994-1319
               

               
Cow position:
               
chr12:15039138-15038822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
994-1327
               

               
Cow position:
               
chr12:37170105-37169776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
995-1232
               

               
Cow position:
               
chr12:31517328-31517094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
995-1236
               

               
Cow position:
               
chr12:41216045-41215805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
995-1330
               

               
Cow position:
               
chr12:15103103-15103453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
995-1333
               

               
Cow position:
               
chr12:36790972-36790639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
995-1337
               

               
Cow position:
               
chr12:41658884-41658543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
998-1337
               

               
Cow position:
               
chr12:24032343-24032668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1000-1251
               

               
Cow position:
               
chr12:46120986-46120737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
1000-1279
               

               
Cow position:
               
chr12:7299617-7299338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
1000-1330
               

               
Cow position:
               
chr12:25027928-25027583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 219
               

               
Conread position:
               
1003-1332
               

               
Cow position:
               
chr12:7902953-7902626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
1003-1342
               

               
Cow position:
               
chr12:17269646-17269988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 229
               

               
Conread position:
               
1005-1303
               

               
Cow position:
               
chr12:11587622-11587916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 202
               

               
Conread position:
               
1005-1340
               

               
Cow position:
               
chr12:13988220-13988557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
1009-1313
               

               
Cow position:
               
chr12:26575738-26576049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 223
               

               
Conread position:
               
1010-1334
               

               
Cow position:
               
chr12:16670119-16670444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 198
               

               
Conread position:
               
1010-1336
               

               
Cow position:
               
chr12:9767020-9766702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
1012-1326
               

               
Cow position:
               
chr12:44203127-44202822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
1014-1344
               

               
Cow position:
               
chr12:29675279-29674952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
1017-1215
               

               
Cow position:
               
chr12:3092715-3092520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
1025-1200
               

               
Cow position:
               
chr12:18023564-18023380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
1025-1339
               

               
Cow position:
               
chr12:10942154-10942475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 299
               

               
Conread position:
               
1031-1334
               

               
Cow position:
               
chr12:16056985-16056677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 177
               

               
Conread position:
               
1031-1343
               

               
Cow position:
               
chr12:37814749-37814438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
1032-1303
               

               
Cow position:
               
chr12:6484024-6484275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1032-1325
               

               
Cow position:
               
chr12:19261074-19261364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
1032-1333
               

               
Cow position:
               
chr12:14222852-14223159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
1037-1333
               

               
Cow position:
               
chr12:35241218-35240925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
1037-1342
               

               
Cow position:
               
chr12:21780045-21780352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
1038-1338
               

               
Cow position:
               
chr12:18563033-18563343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 179
               

               
Conread position:
               
1039-1341
               

               
Cow position:
               
chr12:12531189-12530893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
1042-1341
               

               
Cow position:
               
chr12:39746294-39746594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
1044-1318
               

               
Cow position:
               
chr12:16493470-16493193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
1044-1319
               

               
Cow position:
               
chr12:37008814-37008547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1044-1321
               

               
Cow position:
               
chr12:18583103-18582834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
1044-1325
               

               
Cow position:
               
chr12:29358167-29357899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
1044-1331
               

               
Cow position:
               
chr12:3371654-3371375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
1045-1249
               

               
Cow position:
               
chr12:30819130-30819339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1045-1340
               

               
Cow position:
               
chr12:11659816-11660113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
1047-1203
               

               
Cow position:
               
chr12:6235176-6235337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1048-1249
               

               
Cow position:
               
chr12:33319774-33319574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
1052-1327
               

               
Cow position:
               
chr12:42285866-42286138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
1052-1344
               

               
Cow position:
               
chr12:25343680-25343971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
1058-1298
               

               
Cow position:
               
chr12:24043264-24043014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1061-1319
               

               
Cow position:
               
chr12:6687798-6688048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
1063-1308
               

               
Cow position:
               
chr12:26777283-26777042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
1064-1340
               

               
Cow position:
               
chr12:5554426-5554154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
1065-1334
               

               
Cow position:
               
chr12:27192459-27192186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
1068-1314
               

               
Cow position:
               
chr12:33948816-33949058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
1069-1317
               

               
Cow position:
               
chr12:36261603-36261855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1073-1238
               

               
Cow position:
               
chr12:23644887-23644722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
1073-1248
               

               
Cow position:
               
chr12:26151542-26151369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
1073-1316
               

               
Cow position:
               
chr12:18514010-18513766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1075-1341
               

               
Cow position:
               
chr12:5839737-5839476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
1076-1313
               

               
Cow position:
               
chr12:37255944-37256175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
1077-1317
               

               
Cow position:
               
chr12:45092368-45092601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
205, 151
               

               
Conread position:
               
1079-1313
               

               
Cow position:
               
chr12:40158099-40157871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
1079-1333
               

               
Cow position:
               
chr12:22291561-22291314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
1080-1334
               

               
Cow position:
               
chr12:17252273-17252026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1081-1317
               

               
Cow position:
               
chr12:29057315-29057551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 145
               

               
Conread position:
               
1082-1222
               

               
Cow position:
               
chr12:15641181-15641040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1082-1340
               

               
Cow position:
               
chr12:12232810-12233066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
1093-1316
               

               
Cow position:
               
chr12:24167006-24166789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1093-1342
               

               
Cow position:
               
chr12:45039045-45039293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
1105-1324
               

               
Cow position:
               
chr12:2734958-2734743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1108-1315
               

               
Cow position:
               
chr12:43854847-43855049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1108-1317
               

               
Cow position:
               
chr12:24437682-24437471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1109-1339
               

               
Cow position:
               
chr12:23714628-23714855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
1109-1341
               

               
Cow position:
               
chr12:23105891-23106125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
1110-1317
               

               
Cow position:
               
chr12:14986704-14986908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1110-1317
               

               
Cow position:
               
chr12:48578798-48578996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1115-1324
               

               
Cow position:
               
chr12:29731274-29731479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1117-1317
               

               
Cow position:
               
chr12:29316501-29316301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 138
               

               
Conread position:
               
1120-1331
               

               
Cow position:
               
chr12:6480605-6480815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 196
               

               
Conread position:
               
1121-1317
               

               
Cow position:
               
chr12:2964016-2964207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1123-1330
               

               
Cow position:
               
chr12:25528590-25528386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
195, 16
               

               
Conread position:
               
1127-1341
               

               
Cow position:
               
chr12:43551247-43551033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
1132-1316
               

               
Cow position:
               
chr12:4512473-4512291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1136-1344
               

               
Cow position:
               
chr12:6958200-6958406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1139-1321
               

               
Cow position:
               
chr12:19272705-19272524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
177, 89
               

               
Conread position:
               
1139-1340
               

               
Cow position:
               
chr12:583525-583320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 5
               

               
Conread position:
               
1139-1340
               

               
Cow position:
               
chr12:38679033-38679234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 89
               

               
Conread position:
               
1142-1342
               

               
Cow position:
               
chr12:8710972-8711168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1145-1338
               

               
Cow position:
               
chr12:4014443-4014238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1148-1329
               

               
Cow position:
               
chr12:44013604-44013416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
1148-1344
               

               
Cow position:
               
chr12:39339704-39339897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1149-1338
               

               
Cow position:
               
chr12:17254135-17254326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
1151-1339
               

               
Cow position:
               
chr12:41684503-41684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
1157-1336
               

               
Cow position:
               
chr12:46106792-46106968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
1159-1342
               

               
Cow position:
               
chr12:2835407-2835591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
1159-1344
               

               
Cow position:
               
chr12:19061503-19061318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
1168-1319
               

               
Cow position:
               
chr12:44892220-44892372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
1171-1333
               

               
Cow position:
               
chr12:20637520-20637363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1171-1344
               

               
Cow position:
               
chr12:40435027-40434855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1174-1344
               

               
Cow position:
               
chr12:38165522-38165353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1190-1315
               

               
Cow position:
               
chr12:3579519-3579643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.