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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
791-966
               

               
Cow position:
               
chr14:14308163-14307986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
818-1106
               

               
Cow position:
               
chr14:38017088-38017379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
821-1342
               

               
Cow position:
               
chr14:12244040-12244562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
826-1081
               

               
Cow position:
               
chr14:46965901-46965636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
828-982
               

               
Cow position:
               
chr14:14419822-14419673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
828-982
               

               
Cow position:
               
chr14:25673921-25674074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
828-1008
               

               
Cow position:
               
chr14:38865630-38865452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
828-1181
               

               
Cow position:
               
chr14:7813232-7813591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
828-1192
               

               
Cow position:
               
chr14:39821505-39821133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
829-1343
               

               
Cow position:
               
chr14:6490363-6490884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 263
               

               
Conread position:
               
830-1044
               

               
Cow position:
               
chr14:15781589-15781821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
830-1140
               

               
Cow position:
               
chr14:11819786-11820101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 255
               

               
Conread position:
               
830-1343
               

               
Cow position:
               
chr14:30760545-30760031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 13
               

               
Conread position:
               
831-981
               

               
Cow position:
               
chr14:20826334-20826180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
831-1067
               

               
Cow position:
               
chr14:47588675-47588427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
831-1098
               

               
Cow position:
               
chr14:1727728-1728010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
831-1213
               

               
Cow position:
               
chr14:40433258-40432872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
831-1238
               

               
Cow position:
               
chr14:4109138-4109569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
831-1249
               

               
Cow position:
               
chr14:20069186-20069592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
168, 10
               

               
Conread position:
               
831-1260
               

               
Cow position:
               
chr14:28090638-28091064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
831-1332
               

               
Cow position:
               
chr14:11507906-11508410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 182
               

               
Conread position:
               
831-1340
               

               
Cow position:
               
chr14:23090042-23090562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 26
               

               
Conread position:
               
831-1343
               

               
Cow position:
               
chr14:21201493-21202001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
832-982
               

               
Cow position:
               
chr14:22982223-22982070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
832-1008
               

               
Cow position:
               
chr14:20454966-20454793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
832-1249
               

               
Cow position:
               
chr14:17238698-17238260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
832-1294
               

               
Cow position:
               
chr14:25682281-25681788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
103, 290
               

               
Conread position:
               
832-1317
               

               
Cow position:
               
chr14:24237156-24236665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
832-1318
               

               
Cow position:
               
chr14:28988027-28987531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
833-1131
               

               
Cow position:
               
chr14:7270682-7270975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
833-1163
               

               
Cow position:
               
chr14:13006837-13006500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1192
               

               
Cow position:
               
chr14:47603970-47604332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
833-1249
               

               
Cow position:
               
chr14:22583472-22583063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
833-1324
               

               
Cow position:
               
chr14:41809318-41809818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
833-1339
               

               
Cow position:
               
chr14:8848583-8848095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 203
               

               
Conread position:
               
833-1342
               

               
Cow position:
               
chr14:9020361-9019858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
833-1342
               

               
Cow position:
               
chr14:44237366-44237907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 8
               

               
Conread position:
               
834-981
               

               
Cow position:
               
chr14:29010577-29010430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
834-1073
               

               
Cow position:
               
chr14:5501818-5502077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
834-1076
               

               
Cow position:
               
chr14:7317170-7316909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
834-1076
               

               
Cow position:
               
chr14:46735651-46735386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
834-1123
               

               
Cow position:
               
chr14:33538595-33538886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
834-1130
               

               
Cow position:
               
chr14:41756592-41756293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 65
               

               
Conread position:
               
834-1137
               

               
Cow position:
               
chr14:28708359-28708041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
834-1192
               

               
Cow position:
               
chr14:20467779-20468128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
834-1244
               

               
Cow position:
               
chr14:43249918-43249504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
834-1304
               

               
Cow position:
               
chr14:18904274-18904731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 271
               

               
Conread position:
               
835-965
               

               
Cow position:
               
chr14:29300033-29300162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
835-1007
               

               
Cow position:
               
chr14:37151308-37151482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
836-982
               

               
Cow position:
               
chr14:35763242-35763096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
837-1235
               

               
Cow position:
               
chr14:43036210-43035824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
839-1265
               

               
Cow position:
               
chr14:21538153-21538541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
256, 56
               

               
Conread position:
               
840-1083
               

               
Cow position:
               
chr14:47484023-47483767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
841-982
               

               
Cow position:
               
chr14:17485562-17485421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-984
               

               
Cow position:
               
chr14:40284229-40284086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr14:18811792-18811936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-1008
               

               
Cow position:
               
chr14:44344227-44344392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
841-1069
               

               
Cow position:
               
chr14:34021016-34020776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
841-1087
               

               
Cow position:
               
chr14:12546262-12546515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
841-1110
               

               
Cow position:
               
chr14:27254375-27254104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
841-1111
               

               
Cow position:
               
chr14:46074913-46074632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
841-1127
               

               
Cow position:
               
chr14:28137885-28137585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 242
               

               
Conread position:
               
841-1153
               

               
Cow position:
               
chr14:28565938-28565619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 89
               

               
Conread position:
               
841-1154
               

               
Cow position:
               
chr14:7558104-7558436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
841-1160
               

               
Cow position:
               
chr14:13473834-13473514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 143
               

               
Conread position:
               
841-1227
               

               
Cow position:
               
chr14:39774725-39775120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 180
               

               
Conread position:
               
841-1257
               

               
Cow position:
               
chr14:15054660-15055089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
841-1337
               

               
Cow position:
               
chr14:7291122-7290624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
842-933
               

               
Cow position:
               
chr14:20300296-20300387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-964
               

               
Cow position:
               
chr14:41179821-41179698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
842-965
               

               
Cow position:
               
chr14:38811681-38811559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr14:46391303-46391166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr14:46960979-46961119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr14:12484223-12484364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr14:16342115-16342257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr14:45042519-45042376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr14:48250864-48250721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr14:13367329-13367182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
842-990
               

               
Cow position:
               
chr14:6246539-6246687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-1035
               

               
Cow position:
               
chr14:36775926-36775730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1044
               

               
Cow position:
               
chr14:35509649-35509851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
842-1045
               

               
Cow position:
               
chr14:25695706-25695495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
842-1045
               

               
Cow position:
               
chr14:37108585-37108793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
842-1056
               

               
Cow position:
               
chr14:11641250-11641466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr14:37640558-37640326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
842-1069
               

               
Cow position:
               
chr14:39519021-39518784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr14:39891592-39891334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 209
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr14:37624160-37624425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 199
               

               
Conread position:
               
842-1097
               

               
Cow position:
               
chr14:12483985-12484240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
842-1098
               

               
Cow position:
               
chr14:15271672-15271404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr14:44382874-44383145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
842-1100
               

               
Cow position:
               
chr14:10907045-10906776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr14:31156418-31156694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
145, 212
               

               
Conread position:
               
842-1108
               

               
Cow position:
               
chr14:47583014-47582732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr14:35266688-35266970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 211
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr14:40198934-40199217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
142, 259
               

               
Conread position:
               
842-1117
               

               
Cow position:
               
chr14:8754650-8754361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
842-1123
               

               
Cow position:
               
chr14:12249871-12250160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr14:11981979-11981670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr14:23253761-23253467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
145, 233
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr14:47486026-47485741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 140
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr14:16306161-16305869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr14:24992138-24991850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 106
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr14:40346852-40347133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
203, 98
               

               
Conread position:
               
842-1133
               

               
Cow position:
               
chr14:5366198-5365907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 24
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr14:40201451-40201749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 234
               

               
Conread position:
               
842-1147
               

               
Cow position:
               
chr14:8982248-8982554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
842-1156
               

               
Cow position:
               
chr14:49563345-49563658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
842-1164
               

               
Cow position:
               
chr14:33326069-33326400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
842-1186
               

               
Cow position:
               
chr14:27791856-27791517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 215
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr14:42785265-42784933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 117
               

               
Conread position:
               
842-1192
               

               
Cow position:
               
chr14:39877286-39877624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
842-1203
               

               
Cow position:
               
chr14:34221380-34221017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
137, 312
               

               
Conread position:
               
842-1216
               

               
Cow position:
               
chr14:34124850-34125240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr14:21018439-21018052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr14:35544189-35544566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 211
               

               
Conread position:
               
842-1222
               

               
Cow position:
               
chr14:10702508-10702902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
842-1225
               

               
Cow position:
               
chr14:47027049-47027437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
842-1236
               

               
Cow position:
               
chr14:7960086-7959712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr14:7647712-7648096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr14:20600707-20600298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr14:39926511-39926125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr14:37156194-37155786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
117, 174
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr14:37883591-37884004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 203
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr14:39618051-39618468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr14:43452854-43453280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
142, 217
               

               
Conread position:
               
842-1267
               

               
Cow position:
               
chr14:42596703-42596294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 82
               

               
Conread position:
               
842-1271
               

               
Cow position:
               
chr14:20712356-20712801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 307
               

               
Conread position:
               
842-1278
               

               
Cow position:
               
chr14:38921263-38920830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
203, 53
               

               
Conread position:
               
842-1280
               

               
Cow position:
               
chr14:19189363-19188930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
842-1298
               

               
Cow position:
               
chr14:26432915-26433387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 199
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr14:48427402-48426929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 328
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr14:48495822-48496290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
842-1306
               

               
Cow position:
               
chr14:27848526-27848033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 130
               

               
Conread position:
               
842-1308
               

               
Cow position:
               
chr14:16237181-16237658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr14:49824312-49824770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr14:36167261-36166782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr14:41749438-41749914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr14:26620944-26620463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr14:36437158-36437649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 191
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr14:47507430-47506958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
170, 142
               

               
Conread position:
               
842-1329
               

               
Cow position:
               
chr14:14621860-14622336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr14:13385699-13385197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 246
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr14:17755885-17755402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr14:37103525-37103032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr14:40230311-40230809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 289
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr14:20016381-20016888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 240
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr14:31130063-31130555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr14:24417210-24416716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr14:26859421-26859917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 64
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr14:35381914-35381408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 164
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr14:42154635-42155149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 275
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr14:48492459-48492978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr14:8989268-8989761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr14:17013834-17013340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr14:20640295-20640809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 320
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr14:20666699-20667189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr14:28304462-28304973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr14:47584323-47584841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
117, 308
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr14:14326778-14327310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 203
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr14:19207190-19206680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 144
               

               
Conread position:
               
843-977
               

               
Cow position:
               
chr14:28324962-28324829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
843-1116
               

               
Cow position:
               
chr14:26118335-26118049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
843-1131
               

               
Cow position:
               
chr14:19222204-19221906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
843-1192
               

               
Cow position:
               
chr14:39616585-39616926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
843-1319
               

               
Cow position:
               
chr14:6735541-6736027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 189
               

               
Conread position:
               
843-1320
               

               
Cow position:
               
chr14:8102101-8101635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
843-1340
               

               
Cow position:
               
chr14:41471645-41472157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 245
               

               
Conread position:
               
844-971
               

               
Cow position:
               
chr14:13723275-13723402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
844-1055
               

               
Cow position:
               
chr14:26496187-26495979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
844-1095
               

               
Cow position:
               
chr14:26449070-26448812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
844-1153
               

               
Cow position:
               
chr14:35047897-35047581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
844-1222
               

               
Cow position:
               
chr14:36554831-36555209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
844-1227
               

               
Cow position:
               
chr14:5836229-5835844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 209
               

               
Conread position:
               
844-1235
               

               
Cow position:
               
chr14:21964441-21964063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
844-1249
               

               
Cow position:
               
chr14:45605413-45605008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
844-1319
               

               
Cow position:
               
chr14:34199518-34200018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
844-1337
               

               
Cow position:
               
chr14:6599628-6600127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 353
               

               
Conread position:
               
845-957
               

               
Cow position:
               
chr14:33834420-33834305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
845-980
               

               
Cow position:
               
chr14:13634382-13634518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
845-981
               

               
Cow position:
               
chr14:28291228-28291094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
845-989
               

               
Cow position:
               
chr14:46435505-46435650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
845-1043
               

               
Cow position:
               
chr14:21087250-21087042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
845-1067
               

               
Cow position:
               
chr14:193744-193974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
845-1072
               

               
Cow position:
               
chr14:42625790-42625563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
845-1073
               

               
Cow position:
               
chr14:35607131-35607375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
845-1087
               

               
Cow position:
               
chr14:34907121-34907378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
845-1088
               

               
Cow position:
               
chr14:19633503-19633249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
845-1096
               

               
Cow position:
               
chr14:35588480-35588221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
845-1097
               

               
Cow position:
               
chr14:26880483-26880746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
845-1183
               

               
Cow position:
               
chr14:17474253-17474597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 194
               

               
Conread position:
               
845-1192
               

               
Cow position:
               
chr14:106252-106600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
138, 186
               

               
Conread position:
               
845-1192
               

               
Cow position:
               
chr14:41325116-41325480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
845-1226
               

               
Cow position:
               
chr14:9308549-9308163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr14:9029360-9029737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr14:34096273-34096657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
845-1293
               

               
Cow position:
               
chr14:18308987-18309433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
845-1318
               

               
Cow position:
               
chr14:2937970-2937483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 211
               

               
Conread position:
               
845-1334
               

               
Cow position:
               
chr14:26442015-26442521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 324
               

               
Conread position:
               
845-1342
               

               
Cow position:
               
chr14:22989357-22988854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 126
               

               
Conread position:
               
846-1033
               

               
Cow position:
               
chr14:15795488-15795679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 154
               

               
Conread position:
               
847-981
               

               
Cow position:
               
chr14:13464940-13465071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
847-981
               

               
Cow position:
               
chr14:37727130-37727264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr14:19513060-19513190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr14:23080201-23080336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
847-988
               

               
Cow position:
               
chr14:30152399-30152541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
847-1008
               

               
Cow position:
               
chr14:33668000-33668158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
847-1036
               

               
Cow position:
               
chr14:21534723-21534911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
847-1055
               

               
Cow position:
               
chr14:19193697-19193912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
847-1056
               

               
Cow position:
               
chr14:16310593-16310801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
847-1056
               

               
Cow position:
               
chr14:24894081-24893860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
847-1085
               

               
Cow position:
               
chr14:8495474-8495225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
847-1096
               

               
Cow position:
               
chr14:42620710-42620458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 122
               

               
Conread position:
               
847-1128
               

               
Cow position:
               
chr14:47427363-47427070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 207
               

               
Conread position:
               
847-1133
               

               
Cow position:
               
chr14:3878776-3878487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 189
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr14:21284950-21284641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr14:31734532-31734836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr14:37236798-37236525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 111
               

               
Conread position:
               
847-1153
               

               
Cow position:
               
chr14:24683815-24684126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
847-1154
               

               
Cow position:
               
chr14:33828468-33828167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
847-1169
               

               
Cow position:
               
chr14:33462479-33462159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
847-1186
               

               
Cow position:
               
chr14:39807138-39807484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
137, 258
               

               
Conread position:
               
847-1192
               

               
Cow position:
               
chr14:18448688-18449041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
847-1216
               

               
Cow position:
               
chr14:10697205-10697559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 118
               

               
Conread position:
               
847-1225
               

               
Cow position:
               
chr14:34082835-34083230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
847-1238
               

               
Cow position:
               
chr14:27591625-27592033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 175
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr14:9901495-9901092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
847-1303
               

               
Cow position:
               
chr14:28378685-28378214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 116
               

               
Conread position:
               
847-1337
               

               
Cow position:
               
chr14:18940983-18941468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 166
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr14:35420436-35420942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 374
               

               
Conread position:
               
848-973
               

               
Cow position:
               
chr14:45068768-45068892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
848-1059
               

               
Cow position:
               
chr14:46532995-46532789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 154
               

               
Conread position:
               
848-1088
               

               
Cow position:
               
chr14:9875708-9875463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr14:9812277-9812544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 252
               

               
Conread position:
               
848-1117
               

               
Cow position:
               
chr14:22381235-22381511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
111, 250
               

               
Conread position:
               
848-1126
               

               
Cow position:
               
chr14:49543923-49543643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
848-1128
               

               
Cow position:
               
chr14:50140340-50140050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 233
               

               
Conread position:
               
848-1129
               

               
Cow position:
               
chr14:27362364-27362072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 247
               

               
Conread position:
               
848-1183
               

               
Cow position:
               
chr14:44794228-44793887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 225
               

               
Conread position:
               
848-1192
               

               
Cow position:
               
chr14:28795996-28795639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 186
               

               
Conread position:
               
848-1203
               

               
Cow position:
               
chr14:22967071-22966712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
848-1224
               

               
Cow position:
               
chr14:39779073-39778687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 196
               

               
Conread position:
               
848-1229
               

               
Cow position:
               
chr14:25403624-25404005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
848-1236
               

               
Cow position:
               
chr14:19863124-19863509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr14:32574469-32574074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
231, 108
               

               
Conread position:
               
848-1253
               

               
Cow position:
               
chr14:49021584-49021989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
848-1280
               

               
Cow position:
               
chr14:41479339-41479783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 225
               

               
Conread position:
               
848-1319
               

               
Cow position:
               
chr14:43046464-43046017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
848-1320
               

               
Cow position:
               
chr14:42330674-42330186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 247
               

               
Conread position:
               
848-1336
               

               
Cow position:
               
chr14:18345411-18345898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
848-1339
               

               
Cow position:
               
chr14:18484921-18485432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 342
               

               
Conread position:
               
848-1343
               

               
Cow position:
               
chr14:44557516-44558005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
231, 47
               

               
Conread position:
               
849-985
               

               
Cow position:
               
chr14:45300501-45300637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
849-1222
               

               
Cow position:
               
chr14:8784494-8784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
849-1226
               

               
Cow position:
               
chr14:49086622-49086240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
849-1237
               

               
Cow position:
               
chr14:32371428-32371816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
849-1334
               

               
Cow position:
               
chr14:19618447-19618918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 108
               

               
Conread position:
               
849-1334
               

               
Cow position:
               
chr14:26116382-26115886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 113
               

               
Conread position:
               
850-1342
               

               
Cow position:
               
chr14:40253541-40253036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
137, 291
               

               
Conread position:
               
851-1133
               

               
Cow position:
               
chr14:46489939-46490233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
851-1167
               

               
Cow position:
               
chr14:44742070-44742389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
851-1238
               

               
Cow position:
               
chr14:9837585-9837971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 6
               

               
Conread position:
               
852-979
               

               
Cow position:
               
chr14:16525194-16525067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
852-1008
               

               
Cow position:
               
chr14:10541279-10541124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
138, 131
               

               
Conread position:
               
852-1322
               

               
Cow position:
               
chr14:33791507-33791031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 244
               

               
Conread position:
               
853-1330
               

               
Cow position:
               
chr14:45052753-45052268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
120, 246
               

               
Conread position:
               
854-1338
               

               
Cow position:
               
chr14:45677537-45677050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 96
               

               
Conread position:
               
856-1107
               

               
Cow position:
               
chr14:34760593-34760847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 170
               

               
Conread position:
               
856-1222
               

               
Cow position:
               
chr14:25385580-25385949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
856-1226
               

               
Cow position:
               
chr14:13427126-13426783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
856-1251
               

               
Cow position:
               
chr14:44848073-44848460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
856-1338
               

               
Cow position:
               
chr14:20932930-20932445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 247
               

               
Conread position:
               
857-1088
               

               
Cow position:
               
chr14:12488391-12488630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
121, 151
               

               
Conread position:
               
857-1303
               

               
Cow position:
               
chr14:19593829-19594278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
857-1317
               

               
Cow position:
               
chr14:38379331-38378847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
859-982
               

               
Cow position:
               
chr14:2037627-2037746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
859-1072
               

               
Cow position:
               
chr14:19996627-19996402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
859-1080
               

               
Cow position:
               
chr14:44253203-44252987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
859-1088
               

               
Cow position:
               
chr14:44878477-44878720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
859-1095
               

               
Cow position:
               
chr14:45292612-45292857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
859-1107
               

               
Cow position:
               
chr14:16204665-16204909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
859-1132
               

               
Cow position:
               
chr14:14280726-14280438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
859-1140
               

               
Cow position:
               
chr14:15033065-15032773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
859-1181
               

               
Cow position:
               
chr14:12559175-12559504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
859-1190
               

               
Cow position:
               
chr14:44860932-44861267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 178
               

               
Conread position:
               
859-1192
               

               
Cow position:
               
chr14:6984659-6984994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
859-1192
               

               
Cow position:
               
chr14:26108949-26108600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 341
               

               
Conread position:
               
859-1228
               

               
Cow position:
               
chr14:40269537-40269910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 85
               

               
Conread position:
               
859-1235
               

               
Cow position:
               
chr14:14187642-14187257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 284
               

               
Conread position:
               
859-1246
               

               
Cow position:
               
chr14:27312733-27312328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
859-1287
               

               
Cow position:
               
chr14:41128199-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
859-1341
               

               
Cow position:
               
chr14:33751820-33751359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 106
               

               
Conread position:
               
859-1343
               

               
Cow position:
               
chr14:19850723-19851209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 189
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr14:19851611-19852119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 283
               

               
Conread position:
               
860-1046
               

               
Cow position:
               
chr14:1796591-1796404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
860-1056
               

               
Cow position:
               
chr14:35650898-35651101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
860-1131
               

               
Cow position:
               
chr14:11748614-11748880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
860-1202
               

               
Cow position:
               
chr14:22918661-22918308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
860-1251
               

               
Cow position:
               
chr14:25779402-25779013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 193
               

               
Conread position:
               
860-1302
               

               
Cow position:
               
chr14:23712994-23712553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
106, 205
               

               
Conread position:
               
860-1313
               

               
Cow position:
               
chr14:33714380-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 184
               

               
Conread position:
               
860-1318
               

               
Cow position:
               
chr14:33247130-33247578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 100
               

               
Conread position:
               
860-1321
               

               
Cow position:
               
chr14:10078565-10078093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
860-1332
               

               
Cow position:
               
chr14:41211165-41210693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 232
               

               
Conread position:
               
860-1336
               

               
Cow position:
               
chr14:39769923-39770397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
860-1344
               

               
Cow position:
               
chr14:23682571-23682083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
861-1091
               

               
Cow position:
               
chr14:8080261-8080037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
861-1225
               

               
Cow position:
               
chr14:35018449-35018819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 204
               

               
Conread position:
               
861-1325
               

               
Cow position:
               
chr14:15518072-15518568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
862-1131
               

               
Cow position:
               
chr14:24581229-24580956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
862-1223
               

               
Cow position:
               
chr14:36709428-36709060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
862-1249
               

               
Cow position:
               
chr14:26097382-26097783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
863-1130
               

               
Cow position:
               
chr14:27865827-27866093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
233, 123
               

               
Conread position:
               
864-1115
               

               
Cow position:
               
chr14:4649712-4649967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 166
               

               
Conread position:
               
864-1130
               

               
Cow position:
               
chr14:7482359-7482085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
122, 86
               

               
Conread position:
               
864-1134
               

               
Cow position:
               
chr14:33209055-33209326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
153, 129
               

               
Conread position:
               
864-1184
               

               
Cow position:
               
chr14:25231345-25231675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
864-1192
               

               
Cow position:
               
chr14:47974283-47973952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 269
               

               
Conread position:
               
864-1231
               

               
Cow position:
               
chr14:38355487-38355116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
865-1033
               

               
Cow position:
               
chr14:34329356-34329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
865-1045
               

               
Cow position:
               
chr14:34330842-34330659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
865-1126
               

               
Cow position:
               
chr14:42260254-42260510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
865-1309
               

               
Cow position:
               
chr14:5630466-5630019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 235
               

               
Conread position:
               
865-1343
               

               
Cow position:
               
chr14:20320799-20321251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 102
               

               
Conread position:
               
866-1230
               

               
Cow position:
               
chr14:16834632-16834251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 99
               

               
Conread position:
               
869-1049
               

               
Cow position:
               
chr14:28098149-28097972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
869-1084
               

               
Cow position:
               
chr14:12613804-12614020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
869-1140
               

               
Cow position:
               
chr14:38295977-38296263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
869-1325
               

               
Cow position:
               
chr14:49929436-49929910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
869-1327
               

               
Cow position:
               
chr14:3195149-3194706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 6
               

               
Conread position:
               
869-1334
               

               
Cow position:
               
chr14:50589093-50589566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
869-1335
               

               
Cow position:
               
chr14:48740587-48741040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
870-981
               

               
Cow position:
               
chr14:26654780-26654891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr14:36585661-36585772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
870-1091
               

               
Cow position:
               
chr14:19624388-19624151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
870-1091
               

               
Cow position:
               
chr14:50027512-50027287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
870-1097
               

               
Cow position:
               
chr14:23154586-23154827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
117, 201
               

               
Conread position:
               
870-1103
               

               
Cow position:
               
chr14:29884769-29885010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 223
               

               
Conread position:
               
870-1187
               

               
Cow position:
               
chr14:30662285-30661966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
110, 223
               

               
Conread position:
               
870-1214
               

               
Cow position:
               
chr14:12856893-12856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
870-1215
               

               
Cow position:
               
chr14:15990493-15990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
870-1226
               

               
Cow position:
               
chr14:48412579-48412949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
870-1236
               

               
Cow position:
               
chr14:4991289-4990927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
870-1247
               

               
Cow position:
               
chr14:14317164-14316799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
870-1249
               

               
Cow position:
               
chr14:37131956-37131574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 308
               

               
Conread position:
               
870-1284
               

               
Cow position:
               
chr14:27305454-27305025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
114, 339
               

               
Conread position:
               
870-1331
               

               
Cow position:
               
chr14:32452559-32452080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 377
               

               
Conread position:
               
870-1334
               

               
Cow position:
               
chr14:15913256-15913728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
870-1336
               

               
Cow position:
               
chr14:8540918-8541382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
870-1342
               

               
Cow position:
               
chr14:38143816-38144291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
870-1344
               

               
Cow position:
               
chr14:33773755-33774209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
871-1042
               

               
Cow position:
               
chr14:20736827-20736646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
871-1336
               

               
Cow position:
               
chr14:21357849-21357381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 164
               

               
Conread position:
               
872-1093
               

               
Cow position:
               
chr14:36151688-36151469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
872-1198
               

               
Cow position:
               
chr14:3564569-3564245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
872-1249
               

               
Cow position:
               
chr14:38337855-38338221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
872-1342
               

               
Cow position:
               
chr14:13810233-13809773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 259
               

               
Conread position:
               
873-1248
               

               
Cow position:
               
chr14:44258209-44257837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
873-1317
               

               
Cow position:
               
chr14:10858726-10858283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 217
               

               
Conread position:
               
873-1319
               

               
Cow position:
               
chr14:5221992-5222444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 329
               

               
Conread position:
               
873-1319
               

               
Cow position:
               
chr14:14466185-14466619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
874-1111
               

               
Cow position:
               
chr14:10912679-10912918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 173
               

               
Conread position:
               
874-1215
               

               
Cow position:
               
chr14:11614924-11615277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
875-1091
               

               
Cow position:
               
chr14:24797287-24797507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
875-1343
               

               
Cow position:
               
chr14:24922399-24921917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 239
               

               
Conread position:
               
876-1062
               

               
Cow position:
               
chr14:47385927-47385741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
878-1137
               

               
Cow position:
               
chr14:41716397-41716139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
167, 108
               

               
Conread position:
               
878-1330
               

               
Cow position:
               
chr14:38168973-38168532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
879-1069
               

               
Cow position:
               
chr14:8006049-8006238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
879-1221
               

               
Cow position:
               
chr14:40034259-40033933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 146
               

               
Conread position:
               
879-1327
               

               
Cow position:
               
chr14:20010022-20010482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 223
               

               
Conread position:
               
880-1117
               

               
Cow position:
               
chr14:23464527-23464774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
880-1249
               

               
Cow position:
               
chr14:24981743-24981369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
881-1117
               

               
Cow position:
               
chr14:30926992-30926746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
881-1299
               

               
Cow position:
               
chr14:39433973-39434393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
881-1344
               

               
Cow position:
               
chr14:47609301-47609768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
882-1105
               

               
Cow position:
               
chr14:21230320-21230100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
882-1333
               

               
Cow position:
               
chr14:35498215-35498666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 224
               

               
Conread position:
               
882-1333
               

               
Cow position:
               
chr14:47672597-47673056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
883-1140
               

               
Cow position:
               
chr14:8964828-8964567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
103, 157
               

               
Conread position:
               
883-1303
               

               
Cow position:
               
chr14:13582475-13582898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
884-1318
               

               
Cow position:
               
chr14:6541438-6541885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
885-1069
               

               
Cow position:
               
chr14:41190597-41190787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
885-1131
               

               
Cow position:
               
chr14:24786215-24785973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
885-1295
               

               
Cow position:
               
chr14:7695533-7695128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 121
               

               
Conread position:
               
887-1072
               

               
Cow position:
               
chr14:6233982-6234181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
887-1181
               

               
Cow position:
               
chr14:6190657-6190952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 164
               

               
Conread position:
               
887-1225
               

               
Cow position:
               
chr14:34355421-34355776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
887-1295
               

               
Cow position:
               
chr14:12520038-12520439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
887-1336
               

               
Cow position:
               
chr14:36289535-36289966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
888-1249
               

               
Cow position:
               
chr14:19129791-19129418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 354
               

               
Conread position:
               
888-1293
               

               
Cow position:
               
chr14:27077245-27076833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
889-984
               

               
Cow position:
               
chr14:27845883-27845788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
889-1089
               

               
Cow position:
               
chr14:17397326-17397531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
889-1231
               

               
Cow position:
               
chr14:17841008-17841363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
889-1245
               

               
Cow position:
               
chr14:29632604-29632964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 238
               

               
Conread position:
               
889-1318
               

               
Cow position:
               
chr14:38530244-38529821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
889-1342
               

               
Cow position:
               
chr14:10609969-10609497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 422
               

               
Conread position:
               
890-1237
               

               
Cow position:
               
chr14:24796145-24796512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
890-1248
               

               
Cow position:
               
chr14:21691002-21691363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 139
               

               
Conread position:
               
890-1299
               

               
Cow position:
               
chr14:37890128-37889720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 154
               

               
Conread position:
               
890-1343
               

               
Cow position:
               
chr14:3868152-3868615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
891-1336
               

               
Cow position:
               
chr14:11043211-11043668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
894-1327
               

               
Cow position:
               
chr14:39918489-39918905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
898-1334
               

               
Cow position:
               
chr14:13846256-13845820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 207
               

               
Conread position:
               
899-1299
               

               
Cow position:
               
chr14:8786280-8786676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 202
               

               
Conread position:
               
901-1236
               

               
Cow position:
               
chr14:19372610-19372264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 338
               

               
Conread position:
               
901-1319
               

               
Cow position:
               
chr14:40001742-40002142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
325, 60
               

               
Conread position:
               
904-1288
               

               
Cow position:
               
chr14:33300946-33300566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 79
               

               
Conread position:
               
904-1344
               

               
Cow position:
               
chr14:50040505-50040069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
906-1226
               

               
Cow position:
               
chr14:33309248-33309570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
906-1325
               

               
Cow position:
               
chr14:14979441-14979873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 339
               

               
Conread position:
               
907-1070
               

               
Cow position:
               
chr14:21939893-21939739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
909-1322
               

               
Cow position:
               
chr14:28114924-28115354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 296
               

               
Conread position:
               
910-1223
               

               
Cow position:
               
chr14:20384723-20385049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
910-1226
               

               
Cow position:
               
chr14:40165679-40165358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
910-1249
               

               
Cow position:
               
chr14:34984122-34983779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 169
               

               
Conread position:
               
910-1291
               

               
Cow position:
               
chr14:24387709-24387317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 195
               

               
Conread position:
               
910-1299
               

               
Cow position:
               
chr14:1645931-1646323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
913-1154
               

               
Cow position:
               
chr14:6175838-6175589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 186
               

               
Conread position:
               
917-1137
               

               
Cow position:
               
chr14:20483216-20483435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
917-1247
               

               
Cow position:
               
chr14:1977828-1978163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 177
               

               
Conread position:
               
918-1236
               

               
Cow position:
               
chr14:39037479-39037151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 254
               

               
Conread position:
               
918-1320
               

               
Cow position:
               
chr14:12667982-12667569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 202
               

               
Conread position:
               
918-1326
               

               
Cow position:
               
chr14:11846751-11846331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
919-1337
               

               
Cow position:
               
chr14:27919489-27919910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
921-1186
               

               
Cow position:
               
chr14:33643544-33643804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
922-1336
               

               
Cow position:
               
chr14:27355649-27355217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
922-1343
               

               
Cow position:
               
chr14:14417260-14417685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
923-1249
               

               
Cow position:
               
chr14:8750319-8749987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 241
               

               
Conread position:
               
923-1331
               

               
Cow position:
               
chr14:36254477-36254862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
924-1343
               

               
Cow position:
               
chr14:13043005-13042575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 195
               

               
Conread position:
               
925-1299
               

               
Cow position:
               
chr14:16760642-16760260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
926-1192
               

               
Cow position:
               
chr14:3162940-3162694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
927-1334
               

               
Cow position:
               
chr14:20110479-20110896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
932-1134
               

               
Cow position:
               
chr14:45548542-45548737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
932-1168
               

               
Cow position:
               
chr14:12324660-12324409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
932-1192
               

               
Cow position:
               
chr14:26190860-26191137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
932-1279
               

               
Cow position:
               
chr14:37447242-37447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
932-1339
               

               
Cow position:
               
chr14:14948974-14949396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 174
               

               
Conread position:
               
934-1247
               

               
Cow position:
               
chr14:26490510-26490834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
942-1338
               

               
Cow position:
               
chr14:20826698-20826316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
943-1320
               

               
Cow position:
               
chr14:15313782-15313398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
944-1319
               

               
Cow position:
               
chr14:40474769-40474403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
292, 15
               

               
Conread position:
               
945-1327
               

               
Cow position:
               
chr14:7480239-7479836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
958-1247
               

               
Cow position:
               
chr14:1859411-1859698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
964-1326
               

               
Cow position:
               
chr14:44084283-44084642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
971-1332
               

               
Cow position:
               
chr14:48773089-48772741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
978-1249
               

               
Cow position:
               
chr14:10630942-10631210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
978-1249
               

               
Cow position:
               
chr14:33830480-33830212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
978-1341
               

               
Cow position:
               
chr14:25986700-25986329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 122
               

               
Conread position:
               
979-1285
               

               
Cow position:
               
chr14:24608148-24607836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
979-1309
               

               
Cow position:
               
chr14:25002216-25001883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
979-1312
               

               
Cow position:
               
chr14:23080583-23080906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 203
               

               
Conread position:
               
979-1319
               

               
Cow position:
               
chr14:15492778-15492432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 319
               

               
Conread position:
               
979-1325
               

               
Cow position:
               
chr14:48838777-48838426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
979-1332
               

               
Cow position:
               
chr14:16549822-16550166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 117
               

               
Conread position:
               
979-1335
               

               
Cow position:
               
chr14:41966422-41966052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
979-1337
               

               
Cow position:
               
chr14:15997585-15997927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
985-1319
               

               
Cow position:
               
chr14:21933166-21933502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
985-1330
               

               
Cow position:
               
chr14:33341933-33341577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
985-1333
               

               
Cow position:
               
chr14:4202918-4203266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 249
               

               
Conread position:
               
985-1334
               

               
Cow position:
               
chr14:16256941-16256600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 251
               

               
Conread position:
               
985-1343
               

               
Cow position:
               
chr14:12511726-12512074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
986-1335
               

               
Cow position:
               
chr14:19321332-19321685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
990-1295
               

               
Cow position:
               
chr14:26628354-26628661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
994-1249
               

               
Cow position:
               
chr14:19951734-19951478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
995-1175
               

               
Cow position:
               
chr14:17831076-17830896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
995-1326
               

               
Cow position:
               
chr14:35503528-35503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
995-1341
               

               
Cow position:
               
chr14:3948936-3949289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
999-1319
               

               
Cow position:
               
chr14:12954225-12954534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
999-1333
               

               
Cow position:
               
chr14:23424418-23424092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
999-1336
               

               
Cow position:
               
chr14:23443179-23442851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
1000-1326
               

               
Cow position:
               
chr14:26654973-26655305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
1000-1333
               

               
Cow position:
               
chr14:22941562-22941914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1000-1337
               

               
Cow position:
               
chr14:40329601-40329264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
169, 92
               

               
Conread position:
               
1002-1212
               

               
Cow position:
               
chr14:5633780-5633998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1005-1329
               

               
Cow position:
               
chr14:26222899-26222566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 197
               

               
Conread position:
               
1009-1339
               

               
Cow position:
               
chr14:11469997-11470328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
1010-1225
               

               
Cow position:
               
chr14:29698208-29698427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
1010-1327
               

               
Cow position:
               
chr14:11056590-11056902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
1010-1339
               

               
Cow position:
               
chr14:40754094-40754423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
1010-1343
               

               
Cow position:
               
chr14:5025432-5025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
1011-1223
               

               
Cow position:
               
chr14:2038666-2038872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1013-1323
               

               
Cow position:
               
chr14:24945344-24945659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 282
               

               
Conread position:
               
1014-1340
               

               
Cow position:
               
chr14:27823578-27823254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
1015-1334
               

               
Cow position:
               
chr14:19193617-19193289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
1015-1342
               

               
Cow position:
               
chr14:28153601-28153928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
1025-1335
               

               
Cow position:
               
chr14:16524607-16524294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
1025-1344
               

               
Cow position:
               
chr14:12855659-12855978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
1028-1334
               

               
Cow position:
               
chr14:47170219-47170526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
1030-1343
               

               
Cow position:
               
chr14:11285705-11285397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
1035-1331
               

               
Cow position:
               
chr14:4282383-4282681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1039-1327
               

               
Cow position:
               
chr14:33229277-33229568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
1039-1334
               

               
Cow position:
               
chr14:12072831-12073130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
1041-1342
               

               
Cow position:
               
chr14:24527044-24527343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 165
               

               
Conread position:
               
1044-1299
               

               
Cow position:
               
chr14:10693145-10693396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 47
               

               
Conread position:
               
1044-1329
               

               
Cow position:
               
chr14:27504117-27504407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
1044-1337
               

               
Cow position:
               
chr14:3498920-3498636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 158
               

               
Conread position:
               
1044-1338
               

               
Cow position:
               
chr14:29965131-29964840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
165, 47
               

               
Conread position:
               
1044-1341
               

               
Cow position:
               
chr14:4047864-4047567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 280
               

               
Conread position:
               
1045-1249
               

               
Cow position:
               
chr14:5557006-5557208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 183
               

               
Conread position:
               
1045-1318
               

               
Cow position:
               
chr14:27394350-27394622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
1045-1338
               

               
Cow position:
               
chr14:36442904-36443195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
1046-1320
               

               
Cow position:
               
chr14:41486148-41486429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
1049-1215
               

               
Cow position:
               
chr14:3779447-3779278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
1049-1313
               

               
Cow position:
               
chr14:25903634-25903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1049-1320
               

               
Cow position:
               
chr14:21224749-21224483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
1049-1342
               

               
Cow position:
               
chr14:25225840-25225547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 241
               

               
Conread position:
               
1052-1192
               

               
Cow position:
               
chr14:2345175-2345034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1052-1309
               

               
Cow position:
               
chr14:25228244-25227998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1053-1245
               

               
Cow position:
               
chr14:25334164-25333972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
183, 40
               

               
Conread position:
               
1055-1327
               

               
Cow position:
               
chr14:41837769-41838026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1055-1330
               

               
Cow position:
               
chr14:11643153-11643416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
1055-1332
               

               
Cow position:
               
chr14:23103893-23104171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
1055-1336
               

               
Cow position:
               
chr14:7636392-7636676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
1059-1337
               

               
Cow position:
               
chr14:19487387-19487125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
222, 21
               

               
Conread position:
               
1060-1334
               

               
Cow position:
               
chr14:7198600-7198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
1060-1343
               

               
Cow position:
               
chr14:12146381-12146663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
1060-1343
               

               
Cow position:
               
chr14:33546256-33546542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1060-1344
               

               
Cow position:
               
chr14:23962950-23962671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
1064-1249
               

               
Cow position:
               
chr14:45576998-45577182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1065-1294
               

               
Cow position:
               
chr14:5553413-5553183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
1065-1299
               

               
Cow position:
               
chr14:34775655-34775888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
1066-1317
               

               
Cow position:
               
chr14:10937772-10937513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
1070-1343
               

               
Cow position:
               
chr14:10852120-10851844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
1072-1344
               

               
Cow position:
               
chr14:28694630-28694903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
1073-1249
               

               
Cow position:
               
chr14:16457603-16457428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
1075-1344
               

               
Cow position:
               
chr14:28465136-28465401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
1077-1335
               

               
Cow position:
               
chr14:4848430-4848174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
1079-1331
               

               
Cow position:
               
chr14:40191665-40191426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
239, 77
               

               
Conread position:
               
1079-1339
               

               
Cow position:
               
chr14:13731017-13731274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
6, 152
               

               
Conread position:
               
1080-1332
               

               
Cow position:
               
chr14:12033162-12033417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
1080-1344
               

               
Cow position:
               
chr14:29734285-29734542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1081-1249
               

               
Cow position:
               
chr14:26148638-26148805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
1081-1329
               

               
Cow position:
               
chr14:6637149-6637396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
1081-1344
               

               
Cow position:
               
chr14:43868387-43868119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 96
               

               
Conread position:
               
1082-1321
               

               
Cow position:
               
chr14:24712547-24712795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1086-1321
               

               
Cow position:
               
chr14:21535233-21535466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
228, 143
               

               
Conread position:
               
1093-1317
               

               
Cow position:
               
chr14:11729044-11729264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1093-1341
               

               
Cow position:
               
chr14:49941074-49940832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1093-1342
               

               
Cow position:
               
chr14:14812154-14812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 231
               

               
Conread position:
               
1094-1285
               

               
Cow position:
               
chr14:18302026-18301826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1094-1287
               

               
Cow position:
               
chr14:9308130-9307936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1095-1342
               

               
Cow position:
               
chr14:11577132-11576884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
158, 101
               

               
Conread position:
               
1096-1332
               

               
Cow position:
               
chr14:10706938-10706707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1097-1342
               

               
Cow position:
               
chr14:9510603-9510362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
1101-1312
               

               
Cow position:
               
chr14:20466988-20466784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
1101-1331
               

               
Cow position:
               
chr14:18559003-18559228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1102-1295
               

               
Cow position:
               
chr14:34140136-34140327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
1102-1336
               

               
Cow position:
               
chr14:15469925-15470159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
1103-1339
               

               
Cow position:
               
chr14:20245113-20245345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1104-1319
               

               
Cow position:
               
chr14:27733657-27733449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1104-1344
               

               
Cow position:
               
chr14:23078737-23078980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
213, 130
               

               
Conread position:
               
1114-1343
               

               
Cow position:
               
chr14:21556981-21557210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
205, 82
               

               
Conread position:
               
1120-1319
               

               
Cow position:
               
chr14:8707588-8707397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1120-1334
               

               
Cow position:
               
chr14:41156685-41156897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
195, 108
               

               
Conread position:
               
1120-1338
               

               
Cow position:
               
chr14:24785697-24785476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 130
               

               
Conread position:
               
1122-1343
               

               
Cow position:
               
chr14:35651748-35651963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1125-1249
               

               
Cow position:
               
chr14:28707081-28706957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1125-1336
               

               
Cow position:
               
chr14:47224332-47224550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
1127-1294
               

               
Cow position:
               
chr14:21530044-21530210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
1128-1331
               

               
Cow position:
               
chr14:20736642-20736442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
190, 100
               

               
Conread position:
               
1128-1341
               

               
Cow position:
               
chr14:36559195-36559407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 76
               

               
Conread position:
               
1133-1344
               

               
Cow position:
               
chr14:33618328-33618124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1134-1338
               

               
Cow position:
               
chr14:27653189-27652983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
1136-1318
               

               
Cow position:
               
chr14:11079475-11079297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1139-1302
               

               
Cow position:
               
chr14:44751007-44751168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1139-1341
               

               
Cow position:
               
chr14:10440949-10440740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
1140-1303
               

               
Cow position:
               
chr14:11280094-11280256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1144-1327
               

               
Cow position:
               
chr14:32784100-32784285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1146-1334
               

               
Cow position:
               
chr14:8949663-8949476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
1149-1303
               

               
Cow position:
               
chr14:15228550-15228401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1153-1319
               

               
Cow position:
               
chr14:11604888-11604725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1153-1335
               

               
Cow position:
               
chr14:36151331-36151150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
1160-1319
               

               
Cow position:
               
chr14:24746465-24746297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               
Show alignments to all cow chromosomes.