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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
794-1325
               

               
Cow position:
               
chr16:9728870-9729406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
795-982
               

               
Cow position:
               
chr16:41938937-41938753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
824-1338
               

               
Cow position:
               
chr16:35343776-35343253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
825-1303
               

               
Cow position:
               
chr16:29766044-29766506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
825-1344
               

               
Cow position:
               
chr16:13698209-13698746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
826-1222
               

               
Cow position:
               
chr16:16545773-16546178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
827-1313
               

               
Cow position:
               
chr16:14106348-14106840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
828-1107
               

               
Cow position:
               
chr16:44228975-44228686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
829-982
               

               
Cow position:
               
chr16:16567333-16567486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
831-982
               

               
Cow position:
               
chr16:15320768-15320613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
831-989
               

               
Cow position:
               
chr16:6840486-6840327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
831-1030
               

               
Cow position:
               
chr16:8706845-8706635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
831-1088
               

               
Cow position:
               
chr16:24215608-24215343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
831-1096
               

               
Cow position:
               
chr16:28205880-28205607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
831-1098
               

               
Cow position:
               
chr16:19063324-19063604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 257
               

               
Conread position:
               
831-1149
               

               
Cow position:
               
chr16:40305637-40305964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
150, 221
               

               
Conread position:
               
831-1191
               

               
Cow position:
               
chr16:38903728-38903384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
224, 112
               

               
Conread position:
               
831-1246
               

               
Cow position:
               
chr16:40561933-40562359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
831-1273
               

               
Cow position:
               
chr16:33482144-33482605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 202
               

               
Conread position:
               
831-1288
               

               
Cow position:
               
chr16:39474431-39473985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
832-984
               

               
Cow position:
               
chr16:37718733-37718885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
832-1022
               

               
Cow position:
               
chr16:3333132-3333331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
832-1097
               

               
Cow position:
               
chr16:56198224-56198501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 259
               

               
Conread position:
               
832-1221
               

               
Cow position:
               
chr16:52855309-52854917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
832-1236
               

               
Cow position:
               
chr16:51869345-51869757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 119
               

               
Conread position:
               
832-1335
               

               
Cow position:
               
chr16:46752572-46752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 433
               

               
Conread position:
               
833-963
               

               
Cow position:
               
chr16:30663163-30663030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
833-985
               

               
Cow position:
               
chr16:44138831-44138685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
833-1082
               

               
Cow position:
               
chr16:14800033-14799776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
833-1203
               

               
Cow position:
               
chr16:53892071-53891700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
833-1217
               

               
Cow position:
               
chr16:36930611-36930217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
833-1325
               

               
Cow position:
               
chr16:33299102-33299605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
833-1329
               

               
Cow position:
               
chr16:6263136-6262637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
833-1338
               

               
Cow position:
               
chr16:42734283-42733802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 10
               

               
Conread position:
               
833-1343
               

               
Cow position:
               
chr16:54298189-54298696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
834-976
               

               
Cow position:
               
chr16:44654524-44654385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
834-1051
               

               
Cow position:
               
chr16:43724499-43724725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
834-1116
               

               
Cow position:
               
chr16:30311400-30311112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 120
               

               
Conread position:
               
834-1134
               

               
Cow position:
               
chr16:16424895-16424592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 252
               

               
Conread position:
               
834-1190
               

               
Cow position:
               
chr16:18036675-18037023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 133
               

               
Conread position:
               
834-1315
               

               
Cow position:
               
chr16:15726652-15726154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
834-1340
               

               
Cow position:
               
chr16:7010779-7011295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 120
               

               
Conread position:
               
835-970
               

               
Cow position:
               
chr16:47773505-47773636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
835-1132
               

               
Cow position:
               
chr16:51400037-51399735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
835-1327
               

               
Cow position:
               
chr16:15824727-15824232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
835-1343
               

               
Cow position:
               
chr16:52538717-52539246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
836-985
               

               
Cow position:
               
chr16:20662848-20663006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
836-1089
               

               
Cow position:
               
chr16:16963521-16963785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
836-1137
               

               
Cow position:
               
chr16:18540912-18540605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 262
               

               
Conread position:
               
836-1220
               

               
Cow position:
               
chr16:23737894-23738285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
836-1243
               

               
Cow position:
               
chr16:48370235-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
837-1341
               

               
Cow position:
               
chr16:47820283-47820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 176
               

               
Conread position:
               
838-1222
               

               
Cow position:
               
chr16:37062679-37062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
841-965
               

               
Cow position:
               
chr16:41896059-41896184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr16:33177365-33177509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr16:56860908-56861052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-989
               

               
Cow position:
               
chr16:50516181-50516040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 117
               

               
Conread position:
               
841-1039
               

               
Cow position:
               
chr16:8481371-8481166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
841-1083
               

               
Cow position:
               
chr16:15408156-15407917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
841-1089
               

               
Cow position:
               
chr16:21019121-21019380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
146, 241
               

               
Conread position:
               
841-1090
               

               
Cow position:
               
chr16:56150029-56150275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 87
               

               
Conread position:
               
841-1116
               

               
Cow position:
               
chr16:45131224-45130950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
194, 127
               

               
Conread position:
               
841-1204
               

               
Cow position:
               
chr16:30143498-30143111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
841-1211
               

               
Cow position:
               
chr16:33507778-33508168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 209
               

               
Conread position:
               
841-1224
               

               
Cow position:
               
chr16:44096-44481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
841-1225
               

               
Cow position:
               
chr16:56853670-56854037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
841-1249
               

               
Cow position:
               
chr16:5726646-5727061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
841-1249
               

               
Cow position:
               
chr16:49169667-49169250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
841-1299
               

               
Cow position:
               
chr16:29379970-29380439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 236
               

               
Conread position:
               
841-1317
               

               
Cow position:
               
chr16:32970352-32969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
841-1325
               

               
Cow position:
               
chr16:23823303-23822822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
120, 247
               

               
Conread position:
               
841-1333
               

               
Cow position:
               
chr16:819967-820466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 399
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr16:5292689-5292825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr16:17400099-17400236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-980
               

               
Cow position:
               
chr16:40304966-40305107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
842-980
               

               
Cow position:
               
chr16:52214258-52214396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr16:11100078-11099945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr16:53769930-53769792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr16:54231102-54230964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:7997897-7997758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:8796512-8796371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:13177117-13177259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:17143522-17143665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:33133305-33133447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr16:45173833-45173690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr16:45234056-45234204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
842-1000
               

               
Cow position:
               
chr16:6389161-6389001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr16:8448945-8448784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 108
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr16:15495685-15495848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr16:25183394-25183231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr16:26628000-26628163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1018
               

               
Cow position:
               
chr16:42073243-42073065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
842-1022
               

               
Cow position:
               
chr16:14722025-14721842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
842-1045
               

               
Cow position:
               
chr16:5293380-5293587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
842-1050
               

               
Cow position:
               
chr16:15363470-15363677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
842-1061
               

               
Cow position:
               
chr16:37442411-37442180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
842-1066
               

               
Cow position:
               
chr16:5867558-5867320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr16:52527477-52527710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
842-1082
               

               
Cow position:
               
chr16:13330218-13329967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
842-1082
               

               
Cow position:
               
chr16:49141841-49141598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
842-1083
               

               
Cow position:
               
chr16:42253853-42253597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
842-1084
               

               
Cow position:
               
chr16:43851107-43850862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
842-1086
               

               
Cow position:
               
chr16:7639710-7639961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
842-1086
               

               
Cow position:
               
chr16:34210696-34210438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr16:11621086-11620833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 121
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr16:14351210-14350954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 235
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr16:14611395-14611652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 239
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr16:15979128-15978871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 240
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr16:48520174-48520432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
842-1090
               

               
Cow position:
               
chr16:23248715-23248456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 240
               

               
Conread position:
               
842-1093
               

               
Cow position:
               
chr16:53225088-53224838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr16:30587494-30587755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
842-1098
               

               
Cow position:
               
chr16:10202687-10202428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
145, 154
               

               
Conread position:
               
842-1098
               

               
Cow position:
               
chr16:15571109-15571378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 241
               

               
Conread position:
               
842-1098
               

               
Cow position:
               
chr16:23986551-23986814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 257
               

               
Conread position:
               
842-1100
               

               
Cow position:
               
chr16:30639056-30639327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 181
               

               
Conread position:
               
842-1100
               

               
Cow position:
               
chr16:47017527-47017263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1103
               

               
Cow position:
               
chr16:35443299-35443027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 202
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:7048054-7047779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 238
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:18937150-18936873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
145, 261
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:18978432-18978709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 261
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:23875616-23875347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:24240153-24239876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 240
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr16:44451200-44451472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 257
               

               
Conread position:
               
842-1110
               

               
Cow position:
               
chr16:51088029-51088302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 248
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr16:22157883-22157607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
135, 232
               

               
Conread position:
               
842-1117
               

               
Cow position:
               
chr16:14028904-14028628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
842-1120
               

               
Cow position:
               
chr16:39385118-39385414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr16:16177533-16177828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr16:44676603-44676884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr16:43819828-43819536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 237
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr16:4502997-4503293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 260
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr16:4712618-4712914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
141, 195
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr16:8807373-8807078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr16:22717315-22717616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr16:29066885-29067176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 207
               

               
Conread position:
               
842-1133
               

               
Cow position:
               
chr16:23363780-23363488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
145, 179
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr16:15348917-15348617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
140, 236
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr16:28143919-28144219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
142, 255
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr16:49093857-49093560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
142, 233
               

               
Conread position:
               
842-1146
               

               
Cow position:
               
chr16:18650335-18650020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
842-1156
               

               
Cow position:
               
chr16:43537455-43537780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 246
               

               
Conread position:
               
842-1160
               

               
Cow position:
               
chr16:17952667-17952988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 203
               

               
Conread position:
               
842-1172
               

               
Cow position:
               
chr16:24228633-24228297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 260
               

               
Conread position:
               
842-1175
               

               
Cow position:
               
chr16:29823211-29822877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
842-1182
               

               
Cow position:
               
chr16:47304617-47304964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 177
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr16:16265380-16265034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr16:28467874-28467521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
143, 240
               

               
Conread position:
               
842-1183
               

               
Cow position:
               
chr16:34168312-34168653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 231
               

               
Conread position:
               
842-1186
               

               
Cow position:
               
chr16:56445685-56445343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
170, 142
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr16:39646277-39646619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
842-1201
               

               
Cow position:
               
chr16:22129953-22129589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 249
               

               
Conread position:
               
842-1204
               

               
Cow position:
               
chr16:7078021-7077655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
842-1211
               

               
Cow position:
               
chr16:52789779-52790149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
842-1217
               

               
Cow position:
               
chr16:54672959-54673341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr16:43275739-43276128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 258
               

               
Conread position:
               
842-1235
               

               
Cow position:
               
chr16:4626677-4626271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
842-1236
               

               
Cow position:
               
chr16:30715209-30715625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1243
               

               
Cow position:
               
chr16:28833559-28833966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr16:12633621-12634012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr16:18678914-18679315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 317
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr16:8438910-8438522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr16:39616461-39616852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr16:39279361-39278933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
122, 210
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr16:39394294-39394700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr16:7498786-7499185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1254
               

               
Cow position:
               
chr16:28922506-28922913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
842-1254
               

               
Cow position:
               
chr16:35187971-35188385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
842-1258
               

               
Cow position:
               
chr16:9973785-9973359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 270
               

               
Conread position:
               
842-1262
               

               
Cow position:
               
chr16:31122533-31122104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 199
               

               
Conread position:
               
842-1278
               

               
Cow position:
               
chr16:45609703-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 259
               

               
Conread position:
               
842-1281
               

               
Cow position:
               
chr16:33226815-33226374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 326
               

               
Conread position:
               
842-1285
               

               
Cow position:
               
chr16:49217848-49217393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
125, 263
               

               
Conread position:
               
842-1287
               

               
Cow position:
               
chr16:7456749-7456286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 256
               

               
Conread position:
               
842-1287
               

               
Cow position:
               
chr16:30290033-30290481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
842-1287
               

               
Cow position:
               
chr16:51113159-51112711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
842-1288
               

               
Cow position:
               
chr16:3288750-3289182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
842-1294
               

               
Cow position:
               
chr16:13579126-13578678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 149
               

               
Conread position:
               
842-1294
               

               
Cow position:
               
chr16:27701528-27701086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
842-1298
               

               
Cow position:
               
chr16:42242401-42241942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 74
               

               
Conread position:
               
842-1302
               

               
Cow position:
               
chr16:12907101-12906628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 249
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr16:5654233-5654687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr16:8840609-8841083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 244
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr16:15762446-15761965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 378
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr16:33645731-33646201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 396
               

               
Conread position:
               
842-1315
               

               
Cow position:
               
chr16:51500649-51501126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr16:1549157-1548681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr16:50906186-50906678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr16:51578702-51578249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr16:24128418-24128908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 251
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr16:49216244-49215807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr16:42970214-42969718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 130
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr16:53427974-53428457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
842-1324
               

               
Cow position:
               
chr16:4857377-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 205
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr16:48398526-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr16:3633009-3633487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr16:13689380-13689873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 398
               

               
Conread position:
               
842-1328
               

               
Cow position:
               
chr16:40333604-40333123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr16:29158849-29159326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr16:45139385-45139878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr16:51710411-51709935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 214
               

               
Conread position:
               
842-1336
               

               
Cow position:
               
chr16:23483005-23483500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 255
               

               
Conread position:
               
842-1337
               

               
Cow position:
               
chr16:9497556-9497042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 112
               

               
Conread position:
               
842-1337
               

               
Cow position:
               
chr16:19643612-19644108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
842-1337
               

               
Cow position:
               
chr16:56231540-56232031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 234
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr16:16236411-16235910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr16:16369011-16368511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr16:42079122-42078625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr16:8620967-8621470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
159, 76
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr16:34998887-34998397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr16:55683010-55683521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 256
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr16:600662-601167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 246
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr16:11425423-11424926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 192
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr16:49126466-49125960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
843-981
               

               
Cow position:
               
chr16:52861485-52861347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 115
               

               
Conread position:
               
843-983
               

               
Cow position:
               
chr16:36121548-36121409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
843-1298
               

               
Cow position:
               
chr16:16402610-16402138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 199
               

               
Conread position:
               
843-1319
               

               
Cow position:
               
chr16:54287592-54288069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
844-982
               

               
Cow position:
               
chr16:47780790-47780928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
844-1156
               

               
Cow position:
               
chr16:33925963-33925647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 233
               

               
Conread position:
               
844-1337
               

               
Cow position:
               
chr16:13307144-13306651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
844-1344
               

               
Cow position:
               
chr16:12019112-12018606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 251
               

               
Conread position:
               
845-939
               

               
Cow position:
               
chr16:22320006-22319912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-973
               

               
Cow position:
               
chr16:33198744-33198616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-979
               

               
Cow position:
               
chr16:10715397-10715531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-981
               

               
Cow position:
               
chr16:50712187-50712051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr16:33458291-33458144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
845-992
               

               
Cow position:
               
chr16:22340809-22340952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
845-1012
               

               
Cow position:
               
chr16:54228008-54227830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
845-1031
               

               
Cow position:
               
chr16:33777539-33777728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
845-1049
               

               
Cow position:
               
chr16:1957512-1957299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
845-1080
               

               
Cow position:
               
chr16:33751917-33752162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
845-1089
               

               
Cow position:
               
chr16:48424711-48424968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 180
               

               
Conread position:
               
845-1100
               

               
Cow position:
               
chr16:18496448-18496174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
845-1107
               

               
Cow position:
               
chr16:33739424-33739151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
845-1126
               

               
Cow position:
               
chr16:31159851-31159562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
845-1131
               

               
Cow position:
               
chr16:4103440-4103147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
845-1203
               

               
Cow position:
               
chr16:39514364-39513989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
845-1214
               

               
Cow position:
               
chr16:42217973-42217594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 239
               

               
Conread position:
               
845-1222
               

               
Cow position:
               
chr16:23871932-23871544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
845-1237
               

               
Cow position:
               
chr16:30027588-30027992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
200, 141
               

               
Conread position:
               
845-1247
               

               
Cow position:
               
chr16:32132249-32132637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr16:15960574-15960157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr16:22804861-22804465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
231, 50
               

               
Conread position:
               
845-1275
               

               
Cow position:
               
chr16:7917522-7917964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
845-1292
               

               
Cow position:
               
chr16:31978468-31978008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 259
               

               
Conread position:
               
845-1299
               

               
Cow position:
               
chr16:23730216-23729736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
845-1309
               

               
Cow position:
               
chr16:5416032-5415553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
845-1313
               

               
Cow position:
               
chr16:48096043-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 51
               

               
Conread position:
               
845-1316
               

               
Cow position:
               
chr16:13989706-13990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
845-1327
               

               
Cow position:
               
chr16:15370400-15370893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
845-1328
               

               
Cow position:
               
chr16:53509268-53508781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
845-1329
               

               
Cow position:
               
chr16:51598882-51598401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
845-1338
               

               
Cow position:
               
chr16:19757066-19756559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
845-1339
               

               
Cow position:
               
chr16:8026121-8025648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
845-1344
               

               
Cow position:
               
chr16:2223686-2223168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
846-1089
               

               
Cow position:
               
chr16:30209484-30209730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
846-1288
               

               
Cow position:
               
chr16:25170112-25170564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
846-1342
               

               
Cow position:
               
chr16:51289278-51288782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr16:3918251-3918387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr16:4399443-4399582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr16:47852896-47852764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
847-1080
               

               
Cow position:
               
chr16:30939456-30939700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
847-1083
               

               
Cow position:
               
chr16:15188918-15189150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
847-1093
               

               
Cow position:
               
chr16:15255229-15254973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 134
               

               
Conread position:
               
847-1096
               

               
Cow position:
               
chr16:35243176-35243438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
847-1126
               

               
Cow position:
               
chr16:41037406-41037700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 239
               

               
Conread position:
               
847-1130
               

               
Cow position:
               
chr16:19633053-19632759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 238
               

               
Conread position:
               
847-1130
               

               
Cow position:
               
chr16:39417385-39417106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
847-1131
               

               
Cow position:
               
chr16:26500883-26501173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
847-1192
               

               
Cow position:
               
chr16:37379989-37380346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
847-1206
               

               
Cow position:
               
chr16:4981649-4981286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
847-1225
               

               
Cow position:
               
chr16:5725199-5725577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
847-1232
               

               
Cow position:
               
chr16:16096461-16096851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
847-1232
               

               
Cow position:
               
chr16:42339923-42340312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
847-1239
               

               
Cow position:
               
chr16:53627701-53627305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
847-1242
               

               
Cow position:
               
chr16:18354229-18353832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
847-1244
               

               
Cow position:
               
chr16:6379390-6378999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr16:18141607-18141194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr16:25965228-25965628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 178
               

               
Conread position:
               
847-1251
               

               
Cow position:
               
chr16:27013623-27014037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
847-1254
               

               
Cow position:
               
chr16:48340970-48340557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 99
               

               
Conread position:
               
847-1278
               

               
Cow position:
               
chr16:7702253-7702686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 195
               

               
Conread position:
               
847-1303
               

               
Cow position:
               
chr16:4910809-4910336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 373
               

               
Conread position:
               
847-1315
               

               
Cow position:
               
chr16:54578891-54579363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr16:48956525-48957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr16:49230051-49229572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
847-1327
               

               
Cow position:
               
chr16:17665357-17665865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
847-1328
               

               
Cow position:
               
chr16:35757936-35758415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
847-1328
               

               
Cow position:
               
chr16:55233437-55233889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
847-1330
               

               
Cow position:
               
chr16:41590506-41590983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
847-1332
               

               
Cow position:
               
chr16:11775329-11774835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 241
               

               
Conread position:
               
847-1334
               

               
Cow position:
               
chr16:32586921-32587426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 163
               

               
Conread position:
               
847-1337
               

               
Cow position:
               
chr16:3633835-3634332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 321
               

               
Conread position:
               
847-1338
               

               
Cow position:
               
chr16:6344191-6343687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 245
               

               
Conread position:
               
847-1338
               

               
Cow position:
               
chr16:7136628-7136125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
847-1340
               

               
Cow position:
               
chr16:3246470-3245978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 51
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr16:47242674-47243185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 225
               

               
Conread position:
               
847-1342
               

               
Cow position:
               
chr16:38663989-38663483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
847-1343
               

               
Cow position:
               
chr16:52835155-52834673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
847-1343
               

               
Cow position:
               
chr16:53553993-53553492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
848-980
               

               
Cow position:
               
chr16:8462313-8462183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
848-989
               

               
Cow position:
               
chr16:37387434-37387292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
848-1036
               

               
Cow position:
               
chr16:50931920-50931730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
848-1067
               

               
Cow position:
               
chr16:35205285-35205515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 214
               

               
Conread position:
               
848-1101
               

               
Cow position:
               
chr16:9736107-9735844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
848-1106
               

               
Cow position:
               
chr16:50189865-50189601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr16:23864647-23864379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
136, 235
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr16:25472596-25472866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
848-1111
               

               
Cow position:
               
chr16:7083010-7082733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
848-1145
               

               
Cow position:
               
chr16:24147878-24148190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
848-1156
               

               
Cow position:
               
chr16:26389733-26390053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
139, 249
               

               
Conread position:
               
848-1175
               

               
Cow position:
               
chr16:11568387-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
848-1190
               

               
Cow position:
               
chr16:56832017-56831667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
848-1193
               

               
Cow position:
               
chr16:35937059-35937414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 308
               

               
Conread position:
               
848-1201
               

               
Cow position:
               
chr16:10867008-10867372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 254
               

               
Conread position:
               
848-1248
               

               
Cow position:
               
chr16:24825790-24826205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 261
               

               
Conread position:
               
848-1251
               

               
Cow position:
               
chr16:19003797-19003399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
848-1272
               

               
Cow position:
               
chr16:48087147-48086718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
848-1299
               

               
Cow position:
               
chr16:28191790-28192233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 165
               

               
Conread position:
               
848-1303
               

               
Cow position:
               
chr16:14360830-14361282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
848-1317
               

               
Cow position:
               
chr16:52169799-52170253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
848-1318
               

               
Cow position:
               
chr16:7542014-7542487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
848-1318
               

               
Cow position:
               
chr16:50417965-50417510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 178
               

               
Conread position:
               
848-1319
               

               
Cow position:
               
chr16:29655048-29655516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
848-1334
               

               
Cow position:
               
chr16:31558615-31559120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
848-1334
               

               
Cow position:
               
chr16:45731649-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 55
               

               
Conread position:
               
848-1335
               

               
Cow position:
               
chr16:4972302-4971803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 238
               

               
Conread position:
               
848-1342
               

               
Cow position:
               
chr16:44831248-44831750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 217
               

               
Conread position:
               
849-982
               

               
Cow position:
               
chr16:5911005-5911136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
849-982
               

               
Cow position:
               
chr16:24018761-24018630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
849-1288
               

               
Cow position:
               
chr16:7504824-7505250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
850-1096
               

               
Cow position:
               
chr16:32385096-32384842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
850-1328
               

               
Cow position:
               
chr16:9932881-9933371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
851-1117
               

               
Cow position:
               
chr16:25287964-25287690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
852-1091
               

               
Cow position:
               
chr16:31544009-31544246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 173
               

               
Conread position:
               
852-1098
               

               
Cow position:
               
chr16:29051396-29051656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
123, 244
               

               
Conread position:
               
852-1248
               

               
Cow position:
               
chr16:29608245-29608639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 235
               

               
Conread position:
               
852-1288
               

               
Cow position:
               
chr16:56846171-56845730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 181
               

               
Conread position:
               
852-1336
               

               
Cow position:
               
chr16:14754596-14754111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 246
               

               
Conread position:
               
852-1344
               

               
Cow position:
               
chr16:20476259-20476759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 229
               

               
Conread position:
               
853-981
               

               
Cow position:
               
chr16:43126446-43126319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
853-1216
               

               
Cow position:
               
chr16:56875925-56875564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 208
               

               
Conread position:
               
853-1336
               

               
Cow position:
               
chr16:21450576-21451069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
854-1026
               

               
Cow position:
               
chr16:41654015-41654197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
854-1129
               

               
Cow position:
               
chr16:47510239-47509964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 111
               

               
Conread position:
               
854-1191
               

               
Cow position:
               
chr16:675223-675565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
856-983
               

               
Cow position:
               
chr16:52586272-52586145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
856-1169
               

               
Cow position:
               
chr16:11619485-11619802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
121, 109
               

               
Conread position:
               
857-993
               

               
Cow position:
               
chr16:35067203-35067067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
857-1133
               

               
Cow position:
               
chr16:39705108-39704822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
122, 245
               

               
Conread position:
               
857-1172
               

               
Cow position:
               
chr16:30515848-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
857-1234
               

               
Cow position:
               
chr16:5845403-5845787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
857-1324
               

               
Cow position:
               
chr16:19670599-19670151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 32
               

               
Conread position:
               
858-1156
               

               
Cow position:
               
chr16:22868440-22868136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
858-1334
               

               
Cow position:
               
chr16:53813926-53813432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 277
               

               
Conread position:
               
859-981
               

               
Cow position:
               
chr16:50934399-50934278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr16:11082678-11082801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr16:24403464-24403590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr16:33406023-33405901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
859-1056
               

               
Cow position:
               
chr16:590175-589978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
859-1063
               

               
Cow position:
               
chr16:18693396-18693188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
859-1089
               

               
Cow position:
               
chr16:52218823-52219057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
166, 127
               

               
Conread position:
               
859-1099
               

               
Cow position:
               
chr16:53613033-53613288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
859-1137
               

               
Cow position:
               
chr16:34483695-34483953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
859-1140
               

               
Cow position:
               
chr16:46434382-46434092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
859-1188
               

               
Cow position:
               
chr16:13181474-13181810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
859-1192
               

               
Cow position:
               
chr16:4979550-4979877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr16:4499175-4499533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
859-1236
               

               
Cow position:
               
chr16:22919235-22919585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 36
               

               
Conread position:
               
859-1240
               

               
Cow position:
               
chr16:37669994-37669612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
859-1244
               

               
Cow position:
               
chr16:5740989-5741376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
859-1246
               

               
Cow position:
               
chr16:16548349-16548737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
859-1248
               

               
Cow position:
               
chr16:5636323-5636716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr16:53086590-53086209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
859-1250
               

               
Cow position:
               
chr16:18426919-18427319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
859-1287
               

               
Cow position:
               
chr16:48006756-48006325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
859-1295
               

               
Cow position:
               
chr16:24702586-24703028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
100, 284
               

               
Conread position:
               
859-1310
               

               
Cow position:
               
chr16:38709092-38708643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
859-1317
               

               
Cow position:
               
chr16:23563870-23564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 223
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr16:23681106-23681563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 167
               

               
Conread position:
               
859-1320
               

               
Cow position:
               
chr16:41752839-41752378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 195
               

               
Conread position:
               
859-1321
               

               
Cow position:
               
chr16:42092642-42092174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 93
               

               
Conread position:
               
859-1327
               

               
Cow position:
               
chr16:22842319-22841838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 326
               

               
Conread position:
               
859-1332
               

               
Cow position:
               
chr16:29095688-29096132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
859-1336
               

               
Cow position:
               
chr16:46521636-46522110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 170
               

               
Conread position:
               
859-1339
               

               
Cow position:
               
chr16:48145665-48145183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 101
               

               
Conread position:
               
859-1343
               

               
Cow position:
               
chr16:44210812-44210332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
859-1343
               

               
Cow position:
               
chr16:44744398-44743906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr16:7075653-7076147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr16:18205705-18206183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 101
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr16:37116808-37117303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
860-981
               

               
Cow position:
               
chr16:44139113-44138992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
860-1049
               

               
Cow position:
               
chr16:53988981-53989172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 173
               

               
Conread position:
               
860-1056
               

               
Cow position:
               
chr16:25484103-25484303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
860-1068
               

               
Cow position:
               
chr16:51043368-51043576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
860-1088
               

               
Cow position:
               
chr16:15677292-15677531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
860-1130
               

               
Cow position:
               
chr16:23033604-23033865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
226, 94
               

               
Conread position:
               
860-1132
               

               
Cow position:
               
chr16:498851-499115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
161, 121
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr16:13791247-13791541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
860-1183
               

               
Cow position:
               
chr16:24672624-24672291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
860-1215
               

               
Cow position:
               
chr16:11153453-11153093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
860-1216
               

               
Cow position:
               
chr16:52889675-52889312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 179
               

               
Conread position:
               
860-1224
               

               
Cow position:
               
chr16:11790748-11791118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 216
               

               
Conread position:
               
860-1226
               

               
Cow position:
               
chr16:18402431-18402796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
860-1245
               

               
Cow position:
               
chr16:5256738-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 61
               

               
Conread position:
               
860-1245
               

               
Cow position:
               
chr16:14758474-14758864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
860-1249
               

               
Cow position:
               
chr16:5363628-5364032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
860-1251
               

               
Cow position:
               
chr16:4059094-4059488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 347
               

               
Conread position:
               
860-1285
               

               
Cow position:
               
chr16:47662448-47662899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 237
               

               
Conread position:
               
860-1329
               

               
Cow position:
               
chr16:8367090-8366613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 180
               

               
Conread position:
               
860-1329
               

               
Cow position:
               
chr16:17142673-17143153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
860-1333
               

               
Cow position:
               
chr16:8959328-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 360
               

               
Conread position:
               
860-1333
               

               
Cow position:
               
chr16:17745569-17746061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
860-1334
               

               
Cow position:
               
chr16:46655017-46655501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
861-1225
               

               
Cow position:
               
chr16:11103090-11102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
861-1299
               

               
Cow position:
               
chr16:3614484-3614919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
861-1339
               

               
Cow position:
               
chr16:43308825-43308343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
862-1134
               

               
Cow position:
               
chr16:27004937-27005221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
862-1140
               

               
Cow position:
               
chr16:6692876-6692577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
862-1249
               

               
Cow position:
               
chr16:33054727-33054348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 97
               

               
Conread position:
               
863-1238
               

               
Cow position:
               
chr16:48494818-48494434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 156
               

               
Conread position:
               
864-989
               

               
Cow position:
               
chr16:9235740-9235614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
864-1303
               

               
Cow position:
               
chr16:46552560-46552979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
864-1319
               

               
Cow position:
               
chr16:14242114-14242570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
864-1334
               

               
Cow position:
               
chr16:23058697-23058213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 104
               

               
Conread position:
               
864-1343
               

               
Cow position:
               
chr16:48385662-48385191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
865-985
               

               
Cow position:
               
chr16:37401062-37401181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
865-1223
               

               
Cow position:
               
chr16:27659986-27659639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
865-1303
               

               
Cow position:
               
chr16:22850069-22850514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
865-1331
               

               
Cow position:
               
chr16:16597302-16597774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 234
               

               
Conread position:
               
866-1248
               

               
Cow position:
               
chr16:35623509-35623117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 246
               

               
Conread position:
               
868-1225
               

               
Cow position:
               
chr16:48492929-48493289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
868-1284
               

               
Cow position:
               
chr16:11615485-11615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 181
               

               
Conread position:
               
869-975
               

               
Cow position:
               
chr16:30909187-30909081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
869-1077
               

               
Cow position:
               
chr16:45261458-45261239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
869-1122
               

               
Cow position:
               
chr16:47098250-47098000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
869-1249
               

               
Cow position:
               
chr16:19408769-19408393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
869-1319
               

               
Cow position:
               
chr16:39164990-39165435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
869-1325
               

               
Cow position:
               
chr16:47245332-47245795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 314
               

               
Conread position:
               
869-1344
               

               
Cow position:
               
chr16:13713167-13712711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
870-963
               

               
Cow position:
               
chr16:22052191-22052284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
870-980
               

               
Cow position:
               
chr16:45157695-45157586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
870-1000
               

               
Cow position:
               
chr16:16932742-16932878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
870-1056
               

               
Cow position:
               
chr16:902142-901942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
870-1091
               

               
Cow position:
               
chr16:11643103-11643324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
870-1130
               

               
Cow position:
               
chr16:44973241-44973508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
870-1131
               

               
Cow position:
               
chr16:9790886-9790616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
870-1183
               

               
Cow position:
               
chr16:5095711-5096011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
870-1192
               

               
Cow position:
               
chr16:13752378-13752056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
870-1216
               

               
Cow position:
               
chr16:4699224-4698888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
870-1225
               

               
Cow position:
               
chr16:8315429-8315085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
870-1235
               

               
Cow position:
               
chr16:4902347-4902708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
870-1248
               

               
Cow position:
               
chr16:8933674-8933294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
870-1313
               

               
Cow position:
               
chr16:50873429-50872993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
870-1315
               

               
Cow position:
               
chr16:238006-238464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 300
               

               
Conread position:
               
870-1315
               

               
Cow position:
               
chr16:47518595-47519030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 90
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr16:7429123-7429584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
870-1320
               

               
Cow position:
               
chr16:13611700-13611236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
870-1321
               

               
Cow position:
               
chr16:9940631-9941083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
113, 201
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr16:35195865-35195400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
870-1331
               

               
Cow position:
               
chr16:26649888-26649420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
870-1334
               

               
Cow position:
               
chr16:16231828-16232276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
286, 25
               

               
Conread position:
               
870-1341
               

               
Cow position:
               
chr16:7665377-7665863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
871-983
               

               
Cow position:
               
chr16:21762554-21762443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
871-1139
               

               
Cow position:
               
chr16:43804243-43804515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
95, 183
               

               
Conread position:
               
871-1169
               

               
Cow position:
               
chr16:42777709-42778017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 175
               

               
Conread position:
               
871-1191
               

               
Cow position:
               
chr16:43661198-43661525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
871-1203
               

               
Cow position:
               
chr16:2308430-2308769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
871-1216
               

               
Cow position:
               
chr16:571170-570820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
871-1222
               

               
Cow position:
               
chr16:26373205-26372845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 231
               

               
Conread position:
               
871-1249
               

               
Cow position:
               
chr16:20025190-20025575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 229
               

               
Conread position:
               
871-1256
               

               
Cow position:
               
chr16:53267475-53267864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
871-1266
               

               
Cow position:
               
chr16:9985636-9985245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
871-1337
               

               
Cow position:
               
chr16:23472496-23472962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 218
               

               
Conread position:
               
872-1002
               

               
Cow position:
               
chr16:46453011-46452880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
872-1014
               

               
Cow position:
               
chr16:7619449-7619299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
872-1288
               

               
Cow position:
               
chr16:54665064-54664633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
872-1334
               

               
Cow position:
               
chr16:10040091-10039626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 176
               

               
Conread position:
               
872-1344
               

               
Cow position:
               
chr16:935699-935230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 153
               

               
Conread position:
               
873-1036
               

               
Cow position:
               
chr16:18685493-18685332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
873-1190
               

               
Cow position:
               
chr16:8280041-8279718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
873-1249
               

               
Cow position:
               
chr16:13195585-13195211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 112
               

               
Conread position:
               
873-1251
               

               
Cow position:
               
chr16:46353826-46353459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
346, 103
               

               
Conread position:
               
873-1272
               

               
Cow position:
               
chr16:37452868-37452462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
874-1244
               

               
Cow position:
               
chr16:42633999-42633618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
874-1316
               

               
Cow position:
               
chr16:33704547-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 258
               

               
Conread position:
               
874-1327
               

               
Cow position:
               
chr16:38905477-38905013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 211
               

               
Conread position:
               
874-1332
               

               
Cow position:
               
chr16:11008093-11008543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
874-1333
               

               
Cow position:
               
chr16:8522638-8522174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 112
               

               
Conread position:
               
875-985
               

               
Cow position:
               
chr16:18574135-18574245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
875-1090
               

               
Cow position:
               
chr16:43152955-43152740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
875-1238
               

               
Cow position:
               
chr16:11939819-11940157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 20
               

               
Conread position:
               
875-1270
               

               
Cow position:
               
chr16:13969629-13969207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 236
               

               
Conread position:
               
875-1294
               

               
Cow position:
               
chr16:56522722-56522296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
875-1303
               

               
Cow position:
               
chr16:14568734-14568305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
875-1344
               

               
Cow position:
               
chr16:26610384-26610869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 8
               

               
Conread position:
               
876-1129
               

               
Cow position:
               
chr16:47620131-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 221
               

               
Conread position:
               
877-1318
               

               
Cow position:
               
chr16:29557879-29557423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 210
               

               
Conread position:
               
878-1088
               

               
Cow position:
               
chr16:37065479-37065258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
878-1183
               

               
Cow position:
               
chr16:689134-689442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 163
               

               
Conread position:
               
878-1249
               

               
Cow position:
               
chr16:11806435-11806803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
878-1324
               

               
Cow position:
               
chr16:25839364-25839818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
878-1344
               

               
Cow position:
               
chr16:50282678-50282209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 237
               

               
Conread position:
               
879-1203
               

               
Cow position:
               
chr16:32327406-32327745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
87, 133
               

               
Conread position:
               
880-985
               

               
Cow position:
               
chr16:52802395-52802500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
880-1190
               

               
Cow position:
               
chr16:46176284-46175978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
881-1344
               

               
Cow position:
               
chr16:33588424-33588888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
882-1088
               

               
Cow position:
               
chr16:23810679-23810887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
882-1139
               

               
Cow position:
               
chr16:47336487-47336758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
882-1318
               

               
Cow position:
               
chr16:11815849-11815389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 346
               

               
Conread position:
               
883-1183
               

               
Cow position:
               
chr16:30096372-30096068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
883-1319
               

               
Cow position:
               
chr16:2750749-2751176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 176
               

               
Conread position:
               
883-1336
               

               
Cow position:
               
chr16:45813938-45813478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
884-1244
               

               
Cow position:
               
chr16:33235376-33235036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
885-1143
               

               
Cow position:
               
chr16:35168485-35168759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
885-1204
               

               
Cow position:
               
chr16:53048311-53048640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
885-1320
               

               
Cow position:
               
chr16:7152414-7151970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 209
               

               
Conread position:
               
885-1335
               

               
Cow position:
               
chr16:10148041-10148485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 104
               

               
Conread position:
               
886-1098
               

               
Cow position:
               
chr16:18074498-18074281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 144
               

               
Conread position:
               
886-1111
               

               
Cow position:
               
chr16:4134627-4134869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
886-1131
               

               
Cow position:
               
chr16:45603440-45603684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
886-1153
               

               
Cow position:
               
chr16:11274670-11274940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
886-1232
               

               
Cow position:
               
chr16:36203854-36203504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
886-1324
               

               
Cow position:
               
chr16:45047862-45047448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
886-1327
               

               
Cow position:
               
chr16:56082599-56082152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 207
               

               
Conread position:
               
887-1184
               

               
Cow position:
               
chr16:13233182-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
887-1303
               

               
Cow position:
               
chr16:51246725-51247131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
888-1013
               

               
Cow position:
               
chr16:30035970-30036098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
889-1130
               

               
Cow position:
               
chr16:45534947-45535192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
889-1154
               

               
Cow position:
               
chr16:1725309-1725035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
889-1248
               

               
Cow position:
               
chr16:8812323-8811966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
889-1332
               

               
Cow position:
               
chr16:11422074-11422532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
890-1130
               

               
Cow position:
               
chr16:4372731-4372479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
64, 150
               

               
Conread position:
               
890-1202
               

               
Cow position:
               
chr16:22692255-22692576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
890-1253
               

               
Cow position:
               
chr16:30037229-30036854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
890-1299
               

               
Cow position:
               
chr16:4192655-4192249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
891-1192
               

               
Cow position:
               
chr16:594465-594148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 224
               

               
Conread position:
               
891-1279
               

               
Cow position:
               
chr16:5896185-5896582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 252
               

               
Conread position:
               
891-1333
               

               
Cow position:
               
chr16:39695711-39695261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
892-1169
               

               
Cow position:
               
chr16:21904930-21905215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
892-1302
               

               
Cow position:
               
chr16:26676923-26676504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 213
               

               
Conread position:
               
893-1163
               

               
Cow position:
               
chr16:26342045-26342313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
893-1299
               

               
Cow position:
               
chr16:2396095-2396503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
188, 48
               

               
Conread position:
               
894-1225
               

               
Cow position:
               
chr16:27262176-27261843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
896-1223
               

               
Cow position:
               
chr16:11105319-11105661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
896-1316
               

               
Cow position:
               
chr16:32781133-32781571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 272
               

               
Conread position:
               
896-1342
               

               
Cow position:
               
chr16:15504755-15504309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 212
               

               
Conread position:
               
897-1107
               

               
Cow position:
               
chr16:51531201-51530976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 209
               

               
Conread position:
               
897-1295
               

               
Cow position:
               
chr16:50288929-50289329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
897-1319
               

               
Cow position:
               
chr16:18758072-18757633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
898-1343
               

               
Cow position:
               
chr16:49336000-49336450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 200
               

               
Conread position:
               
899-1251
               

               
Cow position:
               
chr16:43105739-43105382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
899-1331
               

               
Cow position:
               
chr16:8069042-8068600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
900-1128
               

               
Cow position:
               
chr16:16543847-16544075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
900-1250
               

               
Cow position:
               
chr16:20634103-20633743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
66, 224
               

               
Conread position:
               
900-1325
               

               
Cow position:
               
chr16:26703140-26702710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
900-1344
               

               
Cow position:
               
chr16:12361197-12360760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 333
               

               
Conread position:
               
904-1118
               

               
Cow position:
               
chr16:47116449-47116669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 211
               

               
Conread position:
               
904-1245
               

               
Cow position:
               
chr16:48191222-48190886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 168
               

               
Conread position:
               
904-1249
               

               
Cow position:
               
chr16:28694520-28694864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
906-1287
               

               
Cow position:
               
chr16:47643200-47643606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 332
               

               
Conread position:
               
906-1313
               

               
Cow position:
               
chr16:42443935-42444356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
906-1319
               

               
Cow position:
               
chr16:8323205-8322794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
78, 199
               

               
Conread position:
               
906-1344
               

               
Cow position:
               
chr16:56787996-56787549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
907-1275
               

               
Cow position:
               
chr16:54679449-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 170
               

               
Conread position:
               
908-1175
               

               
Cow position:
               
chr16:28692927-28692669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
908-1251
               

               
Cow position:
               
chr16:43801126-43800786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
908-1287
               

               
Cow position:
               
chr16:45677069-45676701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 180
               

               
Conread position:
               
909-1317
               

               
Cow position:
               
chr16:31117836-31117419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 235
               

               
Conread position:
               
909-1334
               

               
Cow position:
               
chr16:56126996-56126562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
909-1336
               

               
Cow position:
               
chr16:24143155-24142731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
910-1318
               

               
Cow position:
               
chr16:51696880-51697276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
911-1287
               

               
Cow position:
               
chr16:10592226-10592613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 183
               

               
Conread position:
               
912-1202
               

               
Cow position:
               
chr16:38787047-38787346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
913-1185
               

               
Cow position:
               
chr16:22860971-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
913-1221
               

               
Cow position:
               
chr16:12060201-12060521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
74, 198
               

               
Conread position:
               
915-1334
               

               
Cow position:
               
chr16:8066091-8065666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
916-1224
               

               
Cow position:
               
chr16:14124947-14125244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
916-1333
               

               
Cow position:
               
chr16:41530500-41530094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
64, 170
               

               
Conread position:
               
919-1325
               

               
Cow position:
               
chr16:11957790-11957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 324
               

               
Conread position:
               
919-1334
               

               
Cow position:
               
chr16:55784967-55784531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
920-1246
               

               
Cow position:
               
chr16:17945318-17945651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
921-1335
               

               
Cow position:
               
chr16:33753225-33753653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
924-1328
               

               
Cow position:
               
chr16:45677774-45678190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
925-1318
               

               
Cow position:
               
chr16:52275330-52274934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 311
               

               
Conread position:
               
926-1099
               

               
Cow position:
               
chr16:54598061-54598235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
926-1244
               

               
Cow position:
               
chr16:17626731-17627055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
926-1299
               

               
Cow position:
               
chr16:14685588-14685209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 176
               

               
Conread position:
               
926-1344
               

               
Cow position:
               
chr16:44584627-44584215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
927-1248
               

               
Cow position:
               
chr16:41697289-41696960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
929-1325
               

               
Cow position:
               
chr16:24855344-24855742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 233
               

               
Conread position:
               
931-1344
               

               
Cow position:
               
chr16:12468145-12467739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
932-1335
               

               
Cow position:
               
chr16:6344632-6344240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
933-1303
               

               
Cow position:
               
chr16:20205260-20205650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 313
               

               
Conread position:
               
934-1190
               

               
Cow position:
               
chr16:54083843-54084110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
934-1303
               

               
Cow position:
               
chr16:17736084-17736414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
934-1336
               

               
Cow position:
               
chr16:46433514-46433105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
934-1343
               

               
Cow position:
               
chr16:592007-591578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
937-1154
               

               
Cow position:
               
chr16:53037812-53037595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
938-1242
               

               
Cow position:
               
chr16:17288754-17289072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 305
               

               
Conread position:
               
941-1246
               

               
Cow position:
               
chr16:17282483-17282786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 211
               

               
Conread position:
               
950-1338
               

               
Cow position:
               
chr16:31079271-31078882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
963-1180
               

               
Cow position:
               
chr16:22124119-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
967-1344
               

               
Cow position:
               
chr16:38019960-38020337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
968-1325
               

               
Cow position:
               
chr16:19047588-19047225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
969-1249
               

               
Cow position:
               
chr16:8448794-8448526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
970-1288
               

               
Cow position:
               
chr16:41578077-41578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
972-1223
               

               
Cow position:
               
chr16:42240901-42241154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
973-1226
               

               
Cow position:
               
chr16:27161006-27160754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
973-1329
               

               
Cow position:
               
chr16:9904947-9905309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
977-1330
               

               
Cow position:
               
chr16:47834790-47835134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
978-1244
               

               
Cow position:
               
chr16:25380637-25380369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
978-1322
               

               
Cow position:
               
chr16:54225647-54225311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
979-1221
               

               
Cow position:
               
chr16:42345743-42345508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
979-1231
               

               
Cow position:
               
chr16:14974672-14974429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
979-1238
               

               
Cow position:
               
chr16:20069688-20069952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
979-1285
               

               
Cow position:
               
chr16:31348907-31348589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
7, 194
               

               
Conread position:
               
979-1303
               

               
Cow position:
               
chr16:25386841-25387155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
979-1313
               

               
Cow position:
               
chr16:8240005-8239668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
979-1315
               

               
Cow position:
               
chr16:3047481-3047144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
979-1315
               

               
Cow position:
               
chr16:4275881-4275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
979-1321
               

               
Cow position:
               
chr16:33198574-33198229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
979-1327
               

               
Cow position:
               
chr16:12320082-12320433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
979-1334
               

               
Cow position:
               
chr16:29712280-29712632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
980-1316
               

               
Cow position:
               
chr16:54710172-54709854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
6, 122
               

               
Conread position:
               
982-1325
               

               
Cow position:
               
chr16:38191336-38191685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
983-1330
               

               
Cow position:
               
chr16:39683243-39682883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 230
               

               
Conread position:
               
984-1169
               

               
Cow position:
               
chr16:45753584-45753401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
984-1244
               

               
Cow position:
               
chr16:10772999-10773246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
985-1202
               

               
Cow position:
               
chr16:50521345-50521562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
985-1288
               

               
Cow position:
               
chr16:47964948-47964650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
985-1291
               

               
Cow position:
               
chr16:10504700-10504991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
985-1292
               

               
Cow position:
               
chr16:33267583-33267896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
985-1294
               

               
Cow position:
               
chr16:31269008-31269320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
985-1298
               

               
Cow position:
               
chr16:45348253-45348571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
985-1315
               

               
Cow position:
               
chr16:7442235-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
985-1317
               

               
Cow position:
               
chr16:3303899-3304236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
233, 52
               

               
Conread position:
               
985-1333
               

               
Cow position:
               
chr16:40446119-40446483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
985-1336
               

               
Cow position:
               
chr16:7418251-7418592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
985-1340
               

               
Cow position:
               
chr16:7583264-7583621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
986-1180
               

               
Cow position:
               
chr16:10651022-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
986-1186
               

               
Cow position:
               
chr16:45645817-45645618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
986-1302
               

               
Cow position:
               
chr16:48146789-48146469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
986-1340
               

               
Cow position:
               
chr16:42399031-42398667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
989-1343
               

               
Cow position:
               
chr16:27019945-27020293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
990-1249
               

               
Cow position:
               
chr16:39172283-39172017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
990-1337
               

               
Cow position:
               
chr16:23955954-23955611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
990-1338
               

               
Cow position:
               
chr16:8737937-8738288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
992-1319
               

               
Cow position:
               
chr16:11082883-11083198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
993-1311
               

               
Cow position:
               
chr16:53089465-53089139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
994-1236
               

               
Cow position:
               
chr16:54226722-54226482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
995-1224
               

               
Cow position:
               
chr16:39402121-39401908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
996-1224
               

               
Cow position:
               
chr16:21762093-21761862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
996-1336
               

               
Cow position:
               
chr16:5907229-5907578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
999-1324
               

               
Cow position:
               
chr16:34754079-34753746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1000-1236
               

               
Cow position:
               
chr16:22206958-22207195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
1000-1242
               

               
Cow position:
               
chr16:52133630-52133394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
1000-1342
               

               
Cow position:
               
chr16:22984640-22984974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
1003-1245
               

               
Cow position:
               
chr16:17903764-17903518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
44, 231
               

               
Conread position:
               
1004-1222
               

               
Cow position:
               
chr16:50667172-50667397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1006-1322
               

               
Cow position:
               
chr16:4852228-4851910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
1007-1249
               

               
Cow position:
               
chr16:18052220-18052461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
1007-1295
               

               
Cow position:
               
chr16:48917356-48917653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 205
               

               
Conread position:
               
1007-1343
               

               
Cow position:
               
chr16:13696789-13696456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
1009-1330
               

               
Cow position:
               
chr16:19052527-19052847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
1009-1335
               

               
Cow position:
               
chr16:45121930-45122260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
1009-1338
               

               
Cow position:
               
chr16:56796774-56796434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1010-1235
               

               
Cow position:
               
chr16:4399629-4399854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
1010-1243
               

               
Cow position:
               
chr16:21317703-21317466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1010-1244
               

               
Cow position:
               
chr16:43674767-43675002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
1010-1294
               

               
Cow position:
               
chr16:46807640-46807361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
216, 14
               

               
Conread position:
               
1010-1299
               

               
Cow position:
               
chr16:16570807-16571082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
1010-1320
               

               
Cow position:
               
chr16:8462188-8461879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
1011-1235
               

               
Cow position:
               
chr16:29677737-29677517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
1011-1336
               

               
Cow position:
               
chr16:40514587-40514277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
1012-1304
               

               
Cow position:
               
chr16:2417695-2417399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
1015-1249
               

               
Cow position:
               
chr16:3114434-3114670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
1015-1336
               

               
Cow position:
               
chr16:11660549-11660250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
1016-1245
               

               
Cow position:
               
chr16:21039926-21040157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
1017-1298
               

               
Cow position:
               
chr16:12522958-12523239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
1017-1333
               

               
Cow position:
               
chr16:31149292-31149594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
1021-1333
               

               
Cow position:
               
chr16:50943288-50943605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
1022-1259
               

               
Cow position:
               
chr16:32807388-32807150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
1022-1333
               

               
Cow position:
               
chr16:30036139-30036454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
1027-1216
               

               
Cow position:
               
chr16:50370508-50370694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1028-1333
               

               
Cow position:
               
chr16:56358357-56358070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
1032-1242
               

               
Cow position:
               
chr16:34220098-34220310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
1032-1320
               

               
Cow position:
               
chr16:17135145-17134858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
1032-1333
               

               
Cow position:
               
chr16:33134856-33135147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
1032-1342
               

               
Cow position:
               
chr16:29527739-29528068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
1035-1249
               

               
Cow position:
               
chr16:53792901-53792688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
1037-1245
               

               
Cow position:
               
chr16:17135649-17135851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1038-1236
               

               
Cow position:
               
chr16:16933039-16933239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
1043-1334
               

               
Cow position:
               
chr16:11135055-11134767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 176
               

               
Conread position:
               
1043-1335
               

               
Cow position:
               
chr16:33236349-33236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
1044-1317
               

               
Cow position:
               
chr16:44239332-44239626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1044-1325
               

               
Cow position:
               
chr16:9552989-9553257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1044-1332
               

               
Cow position:
               
chr16:30305886-30305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
1044-1337
               

               
Cow position:
               
chr16:38244697-38244400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
1045-1249
               

               
Cow position:
               
chr16:46430223-46430022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
1045-1338
               

               
Cow position:
               
chr16:51610906-51610605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
1046-1249
               

               
Cow position:
               
chr16:496445-496245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
1046-1344
               

               
Cow position:
               
chr16:11094900-11094596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1047-1224
               

               
Cow position:
               
chr16:7980723-7980897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
1047-1313
               

               
Cow position:
               
chr16:42977394-42977670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
48, 175
               

               
Conread position:
               
1049-1313
               

               
Cow position:
               
chr16:31561685-31561950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 182
               

               
Conread position:
               
1049-1328
               

               
Cow position:
               
chr16:42539658-42539367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
1049-1331
               

               
Cow position:
               
chr16:20824417-20824693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
266, 18
               

               
Conread position:
               
1050-1338
               

               
Cow position:
               
chr16:45294477-45294764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
1053-1343
               

               
Cow position:
               
chr16:11584460-11584179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
1058-1332
               

               
Cow position:
               
chr16:31880820-31880538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
1060-1319
               

               
Cow position:
               
chr16:28444544-28444285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
1064-1316
               

               
Cow position:
               
chr16:7626109-7626352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1065-1337
               

               
Cow position:
               
chr16:56243936-56243662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
224, 111
               

               
Conread position:
               
1068-1335
               

               
Cow position:
               
chr16:20921107-20921370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
1069-1303
               

               
Cow position:
               
chr16:12010047-12010284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
1070-1318
               

               
Cow position:
               
chr16:15407600-15407355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
1070-1334
               

               
Cow position:
               
chr16:46548315-46548045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
142, 125
               

               
Conread position:
               
1070-1336
               

               
Cow position:
               
chr16:49860190-49860457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
1071-1342
               

               
Cow position:
               
chr16:30935814-30936087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
1074-1238
               

               
Cow position:
               
chr16:12133818-12133982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1075-1318
               

               
Cow position:
               
chr16:39516638-39516395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1076-1251
               

               
Cow position:
               
chr16:17292061-17291888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1077-1336
               

               
Cow position:
               
chr16:27728221-27728469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
1079-1279
               

               
Cow position:
               
chr16:55945177-55944984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1080-1333
               

               
Cow position:
               
chr16:17460131-17460392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 244
               

               
Conread position:
               
1080-1338
               

               
Cow position:
               
chr16:50442512-50442773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
134, 121
               

               
Conread position:
               
1083-1281
               

               
Cow position:
               
chr16:21370220-21370021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
160, 73
               

               
Conread position:
               
1083-1329
               

               
Cow position:
               
chr16:32142058-32142304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
1083-1330
               

               
Cow position:
               
chr16:48613507-48613260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
231, 8
               

               
Conread position:
               
1087-1318
               

               
Cow position:
               
chr16:1582955-1582728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1087-1336
               

               
Cow position:
               
chr16:5382146-5382404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
1092-1317
               

               
Cow position:
               
chr16:12324431-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1093-1309
               

               
Cow position:
               
chr16:32893605-32893811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
1093-1319
               

               
Cow position:
               
chr16:7723678-7723901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1093-1320
               

               
Cow position:
               
chr16:11359128-11359350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
1093-1334
               

               
Cow position:
               
chr16:18048178-18047935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
1093-1336
               

               
Cow position:
               
chr16:9560518-9560267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
128, 113
               

               
Conread position:
               
1095-1344
               

               
Cow position:
               
chr16:53451684-53451931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
202, 142
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chr16:7546845-7546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1101-1318
               

               
Cow position:
               
chr16:12220666-12220887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1101-1318
               

               
Cow position:
               
chr16:50286498-50286714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
1101-1335
               

               
Cow position:
               
chr16:9596355-9596587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
211, 127
               

               
Conread position:
               
1102-1340
               

               
Cow position:
               
chr16:29026194-29026437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
1103-1344
               

               
Cow position:
               
chr16:18573067-18572828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
113, 93
               

               
Conread position:
               
1104-1308
               

               
Cow position:
               
chr16:7812678-7812884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
1104-1327
               

               
Cow position:
               
chr16:14376770-14376991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
1104-1330
               

               
Cow position:
               
chr16:9958817-9959041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1105-1331
               

               
Cow position:
               
chr16:31484673-31484453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
1110-1303
               

               
Cow position:
               
chr16:34205070-34204879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 119
               

               
Conread position:
               
1112-1311
               

               
Cow position:
               
chr16:16025432-16025638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1113-1334
               

               
Cow position:
               
chr16:7928388-7928164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1114-1344
               

               
Cow position:
               
chr16:30211452-30211679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
204, 114
               

               
Conread position:
               
1115-1313
               

               
Cow position:
               
chr16:49174290-49174492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
1119-1298
               

               
Cow position:
               
chr16:39385494-39385670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1120-1327
               

               
Cow position:
               
chr16:9513298-9513503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
194, 108
               

               
Conread position:
               
1120-1340
               

               
Cow position:
               
chr16:19478761-19478544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 105
               

               
Conread position:
               
1122-1319
               

               
Cow position:
               
chr16:15714115-15714314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
1123-1332
               

               
Cow position:
               
chr16:7912136-7912341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1132-1299
               

               
Cow position:
               
chr16:45826702-45826539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
1132-1329
               

               
Cow position:
               
chr16:16178048-16178235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1132-1332
               

               
Cow position:
               
chr16:33290400-33290602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1134-1317
               

               
Cow position:
               
chr16:48130376-48130196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1134-1331
               

               
Cow position:
               
chr16:29311541-29311742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1135-1331
               

               
Cow position:
               
chr16:9836756-9836568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
1136-1333
               

               
Cow position:
               
chr16:21442591-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
1139-1309
               

               
Cow position:
               
chr16:51143822-51143991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1140-1303
               

               
Cow position:
               
chr16:12111939-12111782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1140-1340
               

               
Cow position:
               
chr16:3938988-3938788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
1143-1335
               

               
Cow position:
               
chr16:15252025-15251843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1148-1317
               

               
Cow position:
               
chr16:41696040-41696206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1339
               

               
Cow position:
               
chr16:13906414-13906230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
1148-1344
               

               
Cow position:
               
chr16:31011359-31011555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1152-1319
               

               
Cow position:
               
chr16:49734110-49733943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1152-1334
               

               
Cow position:
               
chr16:5396781-5396599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
1152-1336
               

               
Cow position:
               
chr16:11775958-11775778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1153-1342
               

               
Cow position:
               
chr16:10011816-10011623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
1154-1314
               

               
Cow position:
               
chr16:46184195-46184358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1154-1341
               

               
Cow position:
               
chr16:38581040-38581228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
78, 163
               

               
Conread position:
               
1157-1320
               

               
Cow position:
               
chr16:23515725-23515563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1159-1303
               

               
Cow position:
               
chr16:41653015-41653158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
1168-1313
               

               
Cow position:
               
chr16:33458632-33458776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
1205-1326
               

               
Cow position:
               
chr16:21761860-21761738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               
Show alignments to all cow chromosomes.