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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
776-1248
               

               
Cow position:
               
chr21:23322360-23321885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 51
               

               
Conread position:
               
803-1221
               

               
Cow position:
               
chr21:31662205-31662635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
805-1242
               

               
Cow position:
               
chr21:33562764-33563190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
821-985
               

               
Cow position:
               
chr21:28919864-28919702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
821-990
               

               
Cow position:
               
chr21:10858754-10858589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
823-1107
               

               
Cow position:
               
chr21:8973981-8974276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 202
               

               
Conread position:
               
825-1225
               

               
Cow position:
               
chr21:23801359-23800956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
826-985
               

               
Cow position:
               
chr21:45263255-45263102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
827-1116
               

               
Cow position:
               
chr21:31676268-31676562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
828-1097
               

               
Cow position:
               
chr21:31436114-31436393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 267
               

               
Conread position:
               
828-1107
               

               
Cow position:
               
chr21:38651153-38650868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
828-1222
               

               
Cow position:
               
chr21:31576282-31576660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
830-1246
               

               
Cow position:
               
chr21:30250438-30250011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
831-1134
               

               
Cow position:
               
chr21:16909825-16910142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
831-1224
               

               
Cow position:
               
chr21:38120874-38121272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
832-945
               

               
Cow position:
               
chr21:45817-45929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
832-1126
               

               
Cow position:
               
chr21:37282077-37282375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 200
               

               
Conread position:
               
832-1334
               

               
Cow position:
               
chr21:41155634-41156150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
832-1341
               

               
Cow position:
               
chr21:44252057-44251556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 137
               

               
Conread position:
               
833-988
               

               
Cow position:
               
chr21:35899580-35899735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
833-1150
               

               
Cow position:
               
chr21:5344434-5344763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
833-1222
               

               
Cow position:
               
chr21:45915931-45915549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
833-1252
               

               
Cow position:
               
chr21:4080127-4080544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
833-1327
               

               
Cow position:
               
chr21:44826104-44825601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
833-1342
               

               
Cow position:
               
chr21:25344651-25345151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
833-1344
               

               
Cow position:
               
chr21:10071156-10070635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
834-981
               

               
Cow position:
               
chr21:19702297-19702444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
834-981
               

               
Cow position:
               
chr21:30626410-30626266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
834-984
               

               
Cow position:
               
chr21:30257931-30257781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
834-984
               

               
Cow position:
               
chr21:34738371-34738518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
834-985
               

               
Cow position:
               
chr21:4279405-4279556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
834-1033
               

               
Cow position:
               
chr21:34254509-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
834-1114
               

               
Cow position:
               
chr21:1464006-1464291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
834-1158
               

               
Cow position:
               
chr21:32535749-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
834-1169
               

               
Cow position:
               
chr21:24222770-24222421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
834-1204
               

               
Cow position:
               
chr21:16188023-16187656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
834-1279
               

               
Cow position:
               
chr21:46912317-46912773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
834-1292
               

               
Cow position:
               
chr21:19614946-19615410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
152, 81
               

               
Conread position:
               
834-1303
               

               
Cow position:
               
chr21:20160457-20160927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
834-1317
               

               
Cow position:
               
chr21:23606447-23606930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
139, 123
               

               
Conread position:
               
834-1327
               

               
Cow position:
               
chr21:17511549-17512050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
834-1335
               

               
Cow position:
               
chr21:47760550-47761052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 65
               

               
Conread position:
               
835-1172
               

               
Cow position:
               
chr21:23150244-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
836-1095
               

               
Cow position:
               
chr21:32665998-32665734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
836-1185
               

               
Cow position:
               
chr21:33997450-33997095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
836-1303
               

               
Cow position:
               
chr21:30849169-30848699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
836-1304
               

               
Cow position:
               
chr21:3361241-3360766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
837-984
               

               
Cow position:
               
chr21:12075577-12075436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
837-1103
               

               
Cow position:
               
chr21:48251254-48250976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 177
               

               
Conread position:
               
839-1186
               

               
Cow position:
               
chr21:725112-724752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
840-1137
               

               
Cow position:
               
chr21:18783902-18783604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
840-1319
               

               
Cow position:
               
chr21:10007863-10007372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
841-981
               

               
Cow position:
               
chr21:26399675-26399535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr21:18713066-18713203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
841-989
               

               
Cow position:
               
chr21:2387577-2387428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
841-989
               

               
Cow position:
               
chr21:47745893-47745746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
841-1088
               

               
Cow position:
               
chr21:18935541-18935795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
841-1088
               

               
Cow position:
               
chr21:34251753-34251504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
841-1107
               

               
Cow position:
               
chr21:393801-394073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 211
               

               
Conread position:
               
841-1123
               

               
Cow position:
               
chr21:912188-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 257
               

               
Conread position:
               
841-1180
               

               
Cow position:
               
chr21:47767603-47767254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 261
               

               
Conread position:
               
841-1221
               

               
Cow position:
               
chr21:8126016-8125637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
841-1288
               

               
Cow position:
               
chr21:38691970-38692437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
841-1295
               

               
Cow position:
               
chr21:5482531-5483003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
116, 292
               

               
Conread position:
               
841-1317
               

               
Cow position:
               
chr21:7672913-7673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
841-1320
               

               
Cow position:
               
chr21:19958006-19958482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
161, 58
               

               
Conread position:
               
841-1331
               

               
Cow position:
               
chr21:34010610-34010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
842-943
               

               
Cow position:
               
chr21:18155794-18155895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-955
               

               
Cow position:
               
chr21:29954646-29954534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
842-965
               

               
Cow position:
               
chr21:40265614-40265737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr21:11877165-11877297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr21:20588812-20588949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-980
               

               
Cow position:
               
chr21:684260-684399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
842-980
               

               
Cow position:
               
chr21:9278149-9278291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr21:8289860-8289721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr21:28998126-28997985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr21:17282484-17282622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr21:20162316-20162457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr21:3782881-3783024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr21:13300933-13301071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr21:25158674-25158814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr21:21600879-21600731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
135, 116
               

               
Conread position:
               
842-1004
               

               
Cow position:
               
chr21:31159035-31159196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
842-1007
               

               
Cow position:
               
chr21:34011322-34011157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
842-1042
               

               
Cow position:
               
chr21:28599548-28599764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
842-1064
               

               
Cow position:
               
chr21:23683331-23683560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
842-1069
               

               
Cow position:
               
chr21:33419934-33419706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
842-1078
               

               
Cow position:
               
chr21:34658815-34659060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr21:16166852-16166606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:150257-150511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 236
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:1196648-1196906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 240
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:17049373-17049627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:23900026-23899768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 240
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:28993845-28993584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr21:32447323-32447568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 143
               

               
Conread position:
               
842-1090
               

               
Cow position:
               
chr21:4732436-4732177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 234
               

               
Conread position:
               
842-1091
               

               
Cow position:
               
chr21:20377585-20377335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 230
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr21:41957393-41957129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 108
               

               
Conread position:
               
842-1105
               

               
Cow position:
               
chr21:16789502-16789775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 215
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr21:28259778-28260052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
144, 253
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr21:33235579-33235855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr21:41033065-41033332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr21:5009396-5009126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 120
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr21:9209417-9209688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 256
               

               
Conread position:
               
842-1108
               

               
Cow position:
               
chr21:40244215-40244499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1111
               

               
Cow position:
               
chr21:21216360-21216083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 168
               

               
Conread position:
               
842-1114
               

               
Cow position:
               
chr21:43240639-43240926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 236
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr21:36642688-36642967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 230
               

               
Conread position:
               
842-1123
               

               
Cow position:
               
chr21:21480398-21480114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
842-1124
               

               
Cow position:
               
chr21:40058587-40058872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr21:23984503-23984206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 250
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr21:17936149-17936449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 243
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr21:29942782-29943081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr21:47802481-47802182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 216
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr21:8888647-8888942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 231
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr21:11143739-11143434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 172
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr21:29955001-29955308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr21:36973033-36972726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 241
               

               
Conread position:
               
842-1138
               

               
Cow position:
               
chr21:8985330-8985637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 198
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr21:7132681-7132391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr21:20925725-20925416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
842-1154
               

               
Cow position:
               
chr21:44098-44406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
842-1154
               

               
Cow position:
               
chr21:4189615-4189942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
842-1155
               

               
Cow position:
               
chr21:11639801-11640123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
842-1168
               

               
Cow position:
               
chr21:13410042-13409716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 171
               

               
Conread position:
               
842-1169
               

               
Cow position:
               
chr21:23192737-23192393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
842-1169
               

               
Cow position:
               
chr21:24607166-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 222
               

               
Conread position:
               
842-1172
               

               
Cow position:
               
chr21:24130862-24131188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
842-1174
               

               
Cow position:
               
chr21:36163182-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
842-1175
               

               
Cow position:
               
chr21:10727062-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
842-1187
               

               
Cow position:
               
chr21:2420286-2420633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
842-1192
               

               
Cow position:
               
chr21:33729214-33729569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
842-1201
               

               
Cow position:
               
chr21:16612410-16612769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 190
               

               
Conread position:
               
842-1202
               

               
Cow position:
               
chr21:167864-167518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
233, 97
               

               
Conread position:
               
842-1202
               

               
Cow position:
               
chr21:4998704-4998346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 57
               

               
Conread position:
               
842-1202
               

               
Cow position:
               
chr21:11228173-11227812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 97
               

               
Conread position:
               
842-1202
               

               
Cow position:
               
chr21:34391189-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
842-1213
               

               
Cow position:
               
chr21:28477406-28477788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
842-1215
               

               
Cow position:
               
chr21:42540439-42540059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr21:30990487-30990119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr21:28626022-28626410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 73
               

               
Conread position:
               
842-1231
               

               
Cow position:
               
chr21:42348897-42348518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 242
               

               
Conread position:
               
842-1235
               

               
Cow position:
               
chr21:25764416-25764815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
842-1235
               

               
Cow position:
               
chr21:44671534-44671926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 206
               

               
Conread position:
               
842-1243
               

               
Cow position:
               
chr21:10151576-10151993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr21:15976421-15976822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr21:33263632-33264037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr21:16696151-16696573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr21:39401381-39401784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
842-1260
               

               
Cow position:
               
chr21:36297260-36297702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
842-1262
               

               
Cow position:
               
chr21:19766635-19767065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 258
               

               
Conread position:
               
842-1279
               

               
Cow position:
               
chr21:9416023-9416475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 396
               

               
Conread position:
               
842-1299
               

               
Cow position:
               
chr21:14760365-14760802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr21:8351520-8351045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr21:11740351-11739870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 359
               

               
Conread position:
               
842-1313
               

               
Cow position:
               
chr21:3236313-3236762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
842-1315
               

               
Cow position:
               
chr21:24797476-24797916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr21:39403757-39403264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr21:6713757-6713259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 208
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr21:28734131-28733647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 168
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr21:39888963-39888461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 116
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr21:5971055-5970580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr21:27124347-27123859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
48, 191
               

               
Conread position:
               
842-1323
               

               
Cow position:
               
chr21:29069547-29069054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
842-1324
               

               
Cow position:
               
chr21:641365-641854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 90
               

               
Conread position:
               
842-1324
               

               
Cow position:
               
chr21:643118-643590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr21:40786451-40786951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 191
               

               
Conread position:
               
842-1326
               

               
Cow position:
               
chr21:12153914-12154397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 212
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr21:20262553-20262074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 194
               

               
Conread position:
               
842-1329
               

               
Cow position:
               
chr21:24858092-24858589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 251
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr21:42500812-42501327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
842-1333
               

               
Cow position:
               
chr21:81851-82339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 253
               

               
Conread position:
               
842-1333
               

               
Cow position:
               
chr21:33983029-33982535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 173
               

               
Conread position:
               
842-1333
               

               
Cow position:
               
chr21:38900554-38901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 261
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr21:6833833-6834331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 257
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr21:13035268-13034757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 501
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr21:21170161-21169651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 227
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr21:41974598-41974080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 263
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr21:49700255-49699756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
124, 241
               

               
Conread position:
               
842-1336
               

               
Cow position:
               
chr21:31702175-31701665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
842-1337
               

               
Cow position:
               
chr21:19196387-19195876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 253
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr21:45971377-45970895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 124
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr21:4399581-4400078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr21:23672527-23673028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr21:37299246-37299747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr21:32297721-32297220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr21:13048415-13047901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr21:22856000-22856511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
843-986
               

               
Cow position:
               
chr21:37122272-37122128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
843-1131
               

               
Cow position:
               
chr21:36793664-36793973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
843-1319
               

               
Cow position:
               
chr21:5898616-5898144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
843-1321
               

               
Cow position:
               
chr21:15445298-15444815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 248
               

               
Conread position:
               
843-1335
               

               
Cow position:
               
chr21:46849341-46848851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 197
               

               
Conread position:
               
844-981
               

               
Cow position:
               
chr21:23293373-23293237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
844-1021
               

               
Cow position:
               
chr21:5203470-5203647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
844-1096
               

               
Cow position:
               
chr21:39700294-39700030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
844-1204
               

               
Cow position:
               
chr21:35897838-35897475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
844-1234
               

               
Cow position:
               
chr21:33209981-33210369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 250
               

               
Conread position:
               
844-1339
               

               
Cow position:
               
chr21:22718998-22718498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 208
               

               
Conread position:
               
844-1344
               

               
Cow position:
               
chr21:11706968-11706475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 51
               

               
Conread position:
               
845-1018
               

               
Cow position:
               
chr21:426576-426750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
845-1072
               

               
Cow position:
               
chr21:23478933-23478697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
845-1087
               

               
Cow position:
               
chr21:48484656-48484411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
845-1097
               

               
Cow position:
               
chr21:46973347-46973088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 171
               

               
Conread position:
               
845-1108
               

               
Cow position:
               
chr21:39061633-39061904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
138, 236
               

               
Conread position:
               
845-1126
               

               
Cow position:
               
chr21:9862837-9862569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
845-1135
               

               
Cow position:
               
chr21:42913962-42913658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
142, 122
               

               
Conread position:
               
845-1183
               

               
Cow position:
               
chr21:7564538-7564177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
845-1236
               

               
Cow position:
               
chr21:5153401-5153801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 238
               

               
Conread position:
               
845-1241
               

               
Cow position:
               
chr21:28429233-28429632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 120
               

               
Conread position:
               
845-1246
               

               
Cow position:
               
chr21:36795384-36795796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr21:46263960-46264368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
845-1287
               

               
Cow position:
               
chr21:29214372-29213922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 180
               

               
Conread position:
               
845-1318
               

               
Cow position:
               
chr21:36762837-36763326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 96
               

               
Conread position:
               
845-1327
               

               
Cow position:
               
chr21:30592514-30592041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
845-1338
               

               
Cow position:
               
chr21:24296979-24296480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
845-1344
               

               
Cow position:
               
chr21:27863735-27863224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
846-984
               

               
Cow position:
               
chr21:17218831-17218696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
846-1021
               

               
Cow position:
               
chr21:1510861-1511036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr21:12338955-12339091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
847-1011
               

               
Cow position:
               
chr21:31278565-31278735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
847-1041
               

               
Cow position:
               
chr21:26241610-26241815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
847-1075
               

               
Cow position:
               
chr21:42464058-42463811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
847-1082
               

               
Cow position:
               
chr21:28512320-28512558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
847-1084
               

               
Cow position:
               
chr21:39765634-39765875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
847-1091
               

               
Cow position:
               
chr21:9201975-9202218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
847-1108
               

               
Cow position:
               
chr21:12616925-12617195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
847-1115
               

               
Cow position:
               
chr21:42905592-42905309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 101
               

               
Conread position:
               
847-1131
               

               
Cow position:
               
chr21:27743524-27743827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
847-1177
               

               
Cow position:
               
chr21:44754994-44754654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
847-1192
               

               
Cow position:
               
chr21:24796252-24795889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
847-1214
               

               
Cow position:
               
chr21:5566774-5567147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 253
               

               
Conread position:
               
847-1244
               

               
Cow position:
               
chr21:27341811-27341406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 112
               

               
Conread position:
               
847-1245
               

               
Cow position:
               
chr21:32237083-32237470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 237
               

               
Conread position:
               
847-1248
               

               
Cow position:
               
chr21:5392755-5392344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr21:10514595-10515008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr21:33350528-33350935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 205
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr21:42384291-42384703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 255
               

               
Conread position:
               
847-1251
               

               
Cow position:
               
chr21:42414316-42413898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
847-1280
               

               
Cow position:
               
chr21:31691264-31691699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
847-1288
               

               
Cow position:
               
chr21:6623927-6624393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
847-1316
               

               
Cow position:
               
chr21:18289446-18289939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 120
               

               
Conread position:
               
847-1317
               

               
Cow position:
               
chr21:18568865-18568374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 260
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr21:37479742-37480229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 210
               

               
Conread position:
               
847-1328
               

               
Cow position:
               
chr21:27230009-27229529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 320
               

               
Conread position:
               
847-1334
               

               
Cow position:
               
chr21:13089696-13089191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 211
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr21:30231917-30231409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 239
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr21:38918001-38918488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
847-1343
               

               
Cow position:
               
chr21:5595447-5595919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
208, 65
               

               
Conread position:
               
847-1344
               

               
Cow position:
               
chr21:937835-938313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
848-952
               

               
Cow position:
               
chr21:29225275-29225171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-979
               

               
Cow position:
               
chr21:10032144-10032275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-989
               

               
Cow position:
               
chr21:703379-703237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
848-1056
               

               
Cow position:
               
chr21:48262920-48263128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
848-1067
               

               
Cow position:
               
chr21:43272067-43271834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
848-1074
               

               
Cow position:
               
chr21:17412505-17412277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 131
               

               
Conread position:
               
848-1074
               

               
Cow position:
               
chr21:18934710-18934941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
848-1075
               

               
Cow position:
               
chr21:13303606-13303844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
848-1080
               

               
Cow position:
               
chr21:42190380-42190146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
848-1088
               

               
Cow position:
               
chr21:44331498-44331258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
848-1089
               

               
Cow position:
               
chr21:1384211-1384452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
154, 223
               

               
Conread position:
               
848-1098
               

               
Cow position:
               
chr21:2359679-2359935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 229
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr21:13316170-13316440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 254
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr21:47649454-47649725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
132, 234
               

               
Conread position:
               
848-1114
               

               
Cow position:
               
chr21:45866723-45866995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
848-1154
               

               
Cow position:
               
chr21:4795009-4795327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
848-1161
               

               
Cow position:
               
chr21:2904675-2904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
848-1165
               

               
Cow position:
               
chr21:24348451-24348769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
164, 135
               

               
Conread position:
               
848-1175
               

               
Cow position:
               
chr21:5649693-5650025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
848-1183
               

               
Cow position:
               
chr21:32191957-32192304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
848-1192
               

               
Cow position:
               
chr21:20044983-20044625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
848-1203
               

               
Cow position:
               
chr21:41878263-41878619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
848-1236
               

               
Cow position:
               
chr21:395665-396048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
848-1299
               

               
Cow position:
               
chr21:12366174-12366618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 162
               

               
Conread position:
               
848-1303
               

               
Cow position:
               
chr21:23821955-23822401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
848-1303
               

               
Cow position:
               
chr21:48637959-48637506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 110
               

               
Conread position:
               
848-1325
               

               
Cow position:
               
chr21:40899123-40899612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 232
               

               
Conread position:
               
848-1333
               

               
Cow position:
               
chr21:23535500-23535992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
848-1338
               

               
Cow position:
               
chr21:46777186-46776715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 91
               

               
Conread position:
               
848-1341
               

               
Cow position:
               
chr21:15584616-15584136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
848-1344
               

               
Cow position:
               
chr21:25127395-25127901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
849-1037
               

               
Cow position:
               
chr21:14125834-14126031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
849-1077
               

               
Cow position:
               
chr21:7717003-7716760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 226
               

               
Conread position:
               
849-1140
               

               
Cow position:
               
chr21:6764914-6764613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
849-1283
               

               
Cow position:
               
chr21:17722812-17723245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
849-1306
               

               
Cow position:
               
chr21:1483277-1483726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
138, 185
               

               
Conread position:
               
849-1342
               

               
Cow position:
               
chr21:4282078-4281596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
850-1245
               

               
Cow position:
               
chr21:45473969-45473567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 238
               

               
Conread position:
               
850-1318
               

               
Cow position:
               
chr21:3585567-3585100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
850-1321
               

               
Cow position:
               
chr21:29015103-29014650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
851-1178
               

               
Cow position:
               
chr21:5636931-5636595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 109
               

               
Conread position:
               
851-1221
               

               
Cow position:
               
chr21:2679342-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 328
               

               
Conread position:
               
852-952
               

               
Cow position:
               
chr21:9359496-9359597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
852-1107
               

               
Cow position:
               
chr21:43300866-43300600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
852-1108
               

               
Cow position:
               
chr21:42053475-42053211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
5, 255
               

               
Conread position:
               
852-1206
               

               
Cow position:
               
chr21:43357468-43357103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
852-1343
               

               
Cow position:
               
chr21:45151833-45151338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
5, 235
               

               
Conread position:
               
855-1096
               

               
Cow position:
               
chr21:20106952-20106710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
856-985
               

               
Cow position:
               
chr21:28029192-28029321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
856-1088
               

               
Cow position:
               
chr21:21223085-21223321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
856-1175
               

               
Cow position:
               
chr21:2367135-2367454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 102
               

               
Conread position:
               
856-1186
               

               
Cow position:
               
chr21:44515069-44515397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 109
               

               
Conread position:
               
856-1192
               

               
Cow position:
               
chr21:3498293-3498632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
856-1221
               

               
Cow position:
               
chr21:28442541-28442900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
856-1246
               

               
Cow position:
               
chr21:26244729-26245105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
856-1279
               

               
Cow position:
               
chr21:19258621-19259041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 115
               

               
Conread position:
               
857-975
               

               
Cow position:
               
chr21:46626873-46626992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
857-1098
               

               
Cow position:
               
chr21:12973457-12973203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 233
               

               
Conread position:
               
857-1101
               

               
Cow position:
               
chr21:5596941-5597196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 167
               

               
Conread position:
               
857-1140
               

               
Cow position:
               
chr21:3813689-3813396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 198
               

               
Conread position:
               
857-1140
               

               
Cow position:
               
chr21:28881940-28882225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
857-1342
               

               
Cow position:
               
chr21:27521529-27521052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
857-1344
               

               
Cow position:
               
chr21:34653880-34654361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
858-1116
               

               
Cow position:
               
chr21:17302579-17302316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
859-965
               

               
Cow position:
               
chr21:8546407-8546304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
859-975
               

               
Cow position:
               
chr21:46132180-46132064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
859-981
               

               
Cow position:
               
chr21:18979047-18978928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
859-1050
               

               
Cow position:
               
chr21:34835625-34835438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
859-1066
               

               
Cow position:
               
chr21:13440037-13440252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
859-1096
               

               
Cow position:
               
chr21:24765082-24765336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
859-1115
               

               
Cow position:
               
chr21:9710906-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 183
               

               
Conread position:
               
859-1131
               

               
Cow position:
               
chr21:5137692-5137409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
859-1134
               

               
Cow position:
               
chr21:35061886-35062168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 178
               

               
Conread position:
               
859-1182
               

               
Cow position:
               
chr21:47067089-47066772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
859-1197
               

               
Cow position:
               
chr21:34159758-34160096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
859-1214
               

               
Cow position:
               
chr21:45330810-45330446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
127, 248
               

               
Conread position:
               
859-1216
               

               
Cow position:
               
chr21:28955320-28955664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
197, 89
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr21:12801946-12801579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
859-1221
               

               
Cow position:
               
chr21:33947446-33947086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
859-1225
               

               
Cow position:
               
chr21:34739647-34740016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
859-1225
               

               
Cow position:
               
chr21:45355634-45356005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 205
               

               
Conread position:
               
859-1232
               

               
Cow position:
               
chr21:18828511-18828124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
859-1237
               

               
Cow position:
               
chr21:4276796-4276421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
859-1241
               

               
Cow position:
               
chr21:1058875-1059262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr21:18780172-18779780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr21:41597613-41598003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 231
               

               
Conread position:
               
859-1272
               

               
Cow position:
               
chr21:41579549-41579973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
859-1273
               

               
Cow position:
               
chr21:8549479-8549902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
859-1313
               

               
Cow position:
               
chr21:24598457-24598902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
859-1321
               

               
Cow position:
               
chr21:27569360-27568891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
859-1328
               

               
Cow position:
               
chr21:6051304-6051779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 243
               

               
Conread position:
               
859-1335
               

               
Cow position:
               
chr21:48108069-48107601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 204
               

               
Conread position:
               
859-1336
               

               
Cow position:
               
chr21:14464375-14464871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr21:29002364-29001857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 356
               

               
Conread position:
               
860-1018
               

               
Cow position:
               
chr21:28907845-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
860-1099
               

               
Cow position:
               
chr21:37361671-37361427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
860-1130
               

               
Cow position:
               
chr21:12961100-12960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr21:28443580-28443285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
860-1142
               

               
Cow position:
               
chr21:5455183-5454902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
860-1154
               

               
Cow position:
               
chr21:3381282-3380977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
860-1192
               

               
Cow position:
               
chr21:24698288-24698619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
860-1222
               

               
Cow position:
               
chr21:4098674-4099038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 105
               

               
Conread position:
               
860-1224
               

               
Cow position:
               
chr21:47215382-47215024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
860-1245
               

               
Cow position:
               
chr21:29484783-29485168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
860-1248
               

               
Cow position:
               
chr21:3818015-3818401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 109
               

               
Conread position:
               
860-1248
               

               
Cow position:
               
chr21:8618073-8618461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 234
               

               
Conread position:
               
860-1318
               

               
Cow position:
               
chr21:40133954-40134410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 235
               

               
Conread position:
               
860-1320
               

               
Cow position:
               
chr21:24094945-24094494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
860-1330
               

               
Cow position:
               
chr21:41620918-41621406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 243
               

               
Conread position:
               
860-1335
               

               
Cow position:
               
chr21:33520-34015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 236
               

               
Conread position:
               
860-1335
               

               
Cow position:
               
chr21:19083801-19083305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
861-1132
               

               
Cow position:
               
chr21:42145716-42145998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
861-1137
               

               
Cow position:
               
chr21:13897991-13898272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
861-1344
               

               
Cow position:
               
chr21:18318526-18319005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
162, 122
               

               
Conread position:
               
862-1069
               

               
Cow position:
               
chr21:28944563-28944348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 153
               

               
Conread position:
               
862-1129
               

               
Cow position:
               
chr21:17616524-17616247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 181
               

               
Conread position:
               
862-1329
               

               
Cow position:
               
chr21:23586677-23587149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 357
               

               
Conread position:
               
862-1344
               

               
Cow position:
               
chr21:22860803-22861283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
863-1214
               

               
Cow position:
               
chr21:33727659-33727298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
864-1095
               

               
Cow position:
               
chr21:30150466-30150222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
864-1224
               

               
Cow position:
               
chr21:48176629-48176990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 222
               

               
Conread position:
               
864-1226
               

               
Cow position:
               
chr21:18845212-18844842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
864-1316
               

               
Cow position:
               
chr21:11645166-11644704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 373
               

               
Conread position:
               
864-1333
               

               
Cow position:
               
chr21:13585255-13584771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
864-1344
               

               
Cow position:
               
chr21:10005083-10004595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 306
               

               
Conread position:
               
865-1226
               

               
Cow position:
               
chr21:21077133-21077482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
865-1244
               

               
Cow position:
               
chr21:35569580-35569173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
865-1313
               

               
Cow position:
               
chr21:42135820-42135360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 379
               

               
Conread position:
               
865-1332
               

               
Cow position:
               
chr21:47860992-47861456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 226
               

               
Conread position:
               
865-1335
               

               
Cow position:
               
chr21:5238199-5238668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 133
               

               
Conread position:
               
869-1080
               

               
Cow position:
               
chr21:31277629-31277848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
869-1107
               

               
Cow position:
               
chr21:16816939-16817191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
869-1213
               

               
Cow position:
               
chr21:18842430-18842077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 155
               

               
Conread position:
               
869-1317
               

               
Cow position:
               
chr21:32559546-32559108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
870-981
               

               
Cow position:
               
chr21:37208300-37208191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
870-1032
               

               
Cow position:
               
chr21:9334450-9334282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
870-1041
               

               
Cow position:
               
chr21:42465638-42465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
870-1045
               

               
Cow position:
               
chr21:13163702-13163882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
870-1083
               

               
Cow position:
               
chr21:13850262-13850033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
870-1133
               

               
Cow position:
               
chr21:3047495-3047757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
176, 30
               

               
Conread position:
               
870-1186
               

               
Cow position:
               
chr21:10601559-10601242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
870-1226
               

               
Cow position:
               
chr21:25382818-25383199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
870-1230
               

               
Cow position:
               
chr21:45850901-45850530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
870-1247
               

               
Cow position:
               
chr21:10118362-10118756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
117, 225
               

               
Conread position:
               
870-1279
               

               
Cow position:
               
chr21:17643161-17642764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
870-1317
               

               
Cow position:
               
chr21:10263852-10264298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr21:5426755-5427192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
870-1319
               

               
Cow position:
               
chr21:38449643-38449186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 286
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr21:11114520-11114995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 228
               

               
Conread position:
               
870-1330
               

               
Cow position:
               
chr21:42841782-42841312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
870-1336
               

               
Cow position:
               
chr21:3763928-3763470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
870-1336
               

               
Cow position:
               
chr21:7709974-7710442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 221
               

               
Conread position:
               
870-1342
               

               
Cow position:
               
chr21:31253344-31253820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 237
               

               
Conread position:
               
871-1121
               

               
Cow position:
               
chr21:18494776-18495040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
871-1222
               

               
Cow position:
               
chr21:34565403-34565046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
113, 241
               

               
Conread position:
               
871-1224
               

               
Cow position:
               
chr21:33791558-33791211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
98, 216
               

               
Conread position:
               
871-1249
               

               
Cow position:
               
chr21:13365151-13365538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 281
               

               
Conread position:
               
872-1131
               

               
Cow position:
               
chr21:2785966-2785698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
872-1186
               

               
Cow position:
               
chr21:17428314-17428629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
872-1186
               

               
Cow position:
               
chr21:18942018-18941701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
872-1216
               

               
Cow position:
               
chr21:18850408-18850060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
173, 89
               

               
Conread position:
               
872-1222
               

               
Cow position:
               
chr21:22353419-22353069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
872-1225
               

               
Cow position:
               
chr21:1591362-1591730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
872-1243
               

               
Cow position:
               
chr21:47764301-47763930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
872-1244
               

               
Cow position:
               
chr21:13128280-13127910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
872-1252
               

               
Cow position:
               
chr21:2927392-2927006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
872-1252
               

               
Cow position:
               
chr21:28923937-28924307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
872-1303
               

               
Cow position:
               
chr21:17193949-17193499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
872-1320
               

               
Cow position:
               
chr21:14452041-14452499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
873-982
               

               
Cow position:
               
chr21:22464870-22464979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
873-1165
               

               
Cow position:
               
chr21:6102457-6102150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
873-1180
               

               
Cow position:
               
chr21:47730207-47729894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
873-1309
               

               
Cow position:
               
chr21:47465309-47464864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
873-1344
               

               
Cow position:
               
chr21:40589671-40589191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 365
               

               
Conread position:
               
874-981
               

               
Cow position:
               
chr21:7791240-7791133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
874-985
               

               
Cow position:
               
chr21:20549096-20548991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
874-1058
               

               
Cow position:
               
chr21:4268686-4268882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
874-1206
               

               
Cow position:
               
chr21:15610967-15611293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
874-1320
               

               
Cow position:
               
chr21:28027616-28028065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
93, 232
               

               
Conread position:
               
874-1327
               

               
Cow position:
               
chr21:37706594-37706139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
876-1270
               

               
Cow position:
               
chr21:9990329-9990727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
877-1237
               

               
Cow position:
               
chr21:28190844-28191214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 172
               

               
Conread position:
               
878-1191
               

               
Cow position:
               
chr21:39664572-39664260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
878-1200
               

               
Cow position:
               
chr21:46143760-46144106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
878-1212
               

               
Cow position:
               
chr21:30607271-30606927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
878-1226
               

               
Cow position:
               
chr21:37345285-37344928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
107, 224
               

               
Conread position:
               
878-1248
               

               
Cow position:
               
chr21:7582092-7581712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
879-1058
               

               
Cow position:
               
chr21:46829451-46829266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
879-1183
               

               
Cow position:
               
chr21:13488337-13488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
879-1224
               

               
Cow position:
               
chr21:15911218-15911571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 283
               

               
Conread position:
               
880-1102
               

               
Cow position:
               
chr21:42023943-42024171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
880-1317
               

               
Cow position:
               
chr21:802475-802060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
881-1081
               

               
Cow position:
               
chr21:45375436-45375651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
881-1225
               

               
Cow position:
               
chr21:37845928-37845592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
164, 102
               

               
Conread position:
               
881-1325
               

               
Cow position:
               
chr21:17183741-17184190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
882-1286
               

               
Cow position:
               
chr21:29979935-29979540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 84
               

               
Conread position:
               
883-1026
               

               
Cow position:
               
chr21:35897304-35897454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
883-1226
               

               
Cow position:
               
chr21:8235722-8235389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
883-1344
               

               
Cow position:
               
chr21:27146172-27145695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
7, 218
               

               
Conread position:
               
884-1184
               

               
Cow position:
               
chr21:19363641-19363328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
884-1251
               

               
Cow position:
               
chr21:18790733-18790370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
886-1165
               

               
Cow position:
               
chr21:19937108-19936808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
886-1299
               

               
Cow position:
               
chr21:22194286-22193849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
886-1308
               

               
Cow position:
               
chr21:41198586-41198143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 204
               

               
Conread position:
               
886-1317
               

               
Cow position:
               
chr21:32339912-32339482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 211
               

               
Conread position:
               
887-985
               

               
Cow position:
               
chr21:11173793-11173891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
887-1203
               

               
Cow position:
               
chr21:13754628-13754936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
887-1243
               

               
Cow position:
               
chr21:28989438-28989804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
888-1139
               

               
Cow position:
               
chr21:9872794-9873045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
888-1159
               

               
Cow position:
               
chr21:10608629-10608346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 224
               

               
Conread position:
               
889-1272
               

               
Cow position:
               
chr21:21169667-21169275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 203
               

               
Conread position:
               
889-1337
               

               
Cow position:
               
chr21:36756442-36756889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
891-1248
               

               
Cow position:
               
chr21:712764-713136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
893-1186
               

               
Cow position:
               
chr21:46860270-46859989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
893-1224
               

               
Cow position:
               
chr21:28211028-28211362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 191
               

               
Conread position:
               
893-1236
               

               
Cow position:
               
chr21:10000912-10001256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
895-1332
               

               
Cow position:
               
chr21:28244310-28244743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
897-1299
               

               
Cow position:
               
chr21:10114493-10114088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
900-1248
               

               
Cow position:
               
chr21:27624551-27624894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
904-1248
               

               
Cow position:
               
chr21:18800686-18800341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
904-1325
               

               
Cow position:
               
chr21:13840165-13840599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
904-1331
               

               
Cow position:
               
chr21:41590714-41590287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
905-1256
               

               
Cow position:
               
chr21:45921215-45920860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
68, 196
               

               
Conread position:
               
906-1249
               

               
Cow position:
               
chr21:10633796-10633445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 222
               

               
Conread position:
               
907-1186
               

               
Cow position:
               
chr21:24642364-24642653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 261
               

               
Conread position:
               
909-1292
               

               
Cow position:
               
chr21:11456962-11456564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
910-1344
               

               
Cow position:
               
chr21:12749376-12748948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
915-1165
               

               
Cow position:
               
chr21:18041989-18041735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
916-1332
               

               
Cow position:
               
chr21:957521-957947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
917-1223
               

               
Cow position:
               
chr21:35354393-35354703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
918-1279
               

               
Cow position:
               
chr21:42007603-42007234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
920-1279
               

               
Cow position:
               
chr21:29978903-29978539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
920-1332
               

               
Cow position:
               
chr21:9301067-9301506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 307
               

               
Conread position:
               
920-1334
               

               
Cow position:
               
chr21:23980328-23979899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 187
               

               
Conread position:
               
921-1344
               

               
Cow position:
               
chr21:17637758-17638185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
923-1243
               

               
Cow position:
               
chr21:11359899-11360226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
923-1327
               

               
Cow position:
               
chr21:12462109-12461695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 318
               

               
Conread position:
               
924-1163
               

               
Cow position:
               
chr21:44733299-44733063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
924-1317
               

               
Cow position:
               
chr21:20152810-20153220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
53, 188
               

               
Conread position:
               
925-1231
               

               
Cow position:
               
chr21:12723020-12723328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
926-1179
               

               
Cow position:
               
chr21:17856408-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
926-1319
               

               
Cow position:
               
chr21:20260456-20260032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
928-1203
               

               
Cow position:
               
chr21:20192770-20193044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
930-1232
               

               
Cow position:
               
chr21:2810275-2809983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 29
               

               
Conread position:
               
931-1319
               

               
Cow position:
               
chr21:27668881-27669271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
932-1303
               

               
Cow position:
               
chr21:34151451-34151825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 234
               

               
Conread position:
               
934-1334
               

               
Cow position:
               
chr21:46911-47327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
935-1327
               

               
Cow position:
               
chr21:27810278-27810665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
938-1331
               

               
Cow position:
               
chr21:30222218-30222619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
942-1342
               

               
Cow position:
               
chr21:18155693-18155278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 167
               

               
Conread position:
               
946-1244
               

               
Cow position:
               
chr21:25629027-25628721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
952-1243
               

               
Cow position:
               
chr21:36909833-36910119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
954-1303
               

               
Cow position:
               
chr21:30835261-30835615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 186
               

               
Conread position:
               
960-1216
               

               
Cow position:
               
chr21:41107858-41107607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
964-1340
               

               
Cow position:
               
chr21:47719391-47719018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
971-1240
               

               
Cow position:
               
chr21:45262894-45262623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
977-1336
               

               
Cow position:
               
chr21:28919599-28919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
978-1316
               

               
Cow position:
               
chr21:44658505-44658823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
979-1241
               

               
Cow position:
               
chr21:22465121-22465376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
979-1304
               

               
Cow position:
               
chr21:10561660-10561335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
982-1288
               

               
Cow position:
               
chr21:9698158-9697844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
982-1343
               

               
Cow position:
               
chr21:24343337-24342976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
985-1214
               

               
Cow position:
               
chr21:20418754-20418521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
985-1238
               

               
Cow position:
               
chr21:33414154-33413903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 138
               

               
Conread position:
               
985-1318
               

               
Cow position:
               
chr21:44214055-44214375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
985-1340
               

               
Cow position:
               
chr21:45906690-45906333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
985-1343
               

               
Cow position:
               
chr21:9036226-9036590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 228
               

               
Conread position:
               
986-1317
               

               
Cow position:
               
chr21:12916494-12916155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
986-1332
               

               
Cow position:
               
chr21:16914707-16915061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
986-1335
               

               
Cow position:
               
chr21:16569833-16570168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
988-1317
               

               
Cow position:
               
chr21:12339573-12339880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
990-1327
               

               
Cow position:
               
chr21:41140782-41140441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
991-1335
               

               
Cow position:
               
chr21:19702661-19703009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 231
               

               
Conread position:
               
992-1325
               

               
Cow position:
               
chr21:8426379-8426714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
992-1340
               

               
Cow position:
               
chr21:15544280-15543956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
994-1318
               

               
Cow position:
               
chr21:18060017-18059695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
995-1164
               

               
Cow position:
               
chr21:37014462-37014295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
995-1224
               

               
Cow position:
               
chr21:297694-297925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
995-1275
               

               
Cow position:
               
chr21:4280731-4280454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
996-1213
               

               
Cow position:
               
chr21:35899786-35900001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
997-1303
               

               
Cow position:
               
chr21:868982-868670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
1000-1317
               

               
Cow position:
               
chr21:17890249-17890566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
1000-1332
               

               
Cow position:
               
chr21:47714057-47713729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
1004-1318
               

               
Cow position:
               
chr21:41522457-41522149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
1005-1337
               

               
Cow position:
               
chr21:36910691-36911021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
1009-1326
               

               
Cow position:
               
chr21:22014142-22014465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
1010-1303
               

               
Cow position:
               
chr21:16152392-16152689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
1010-1303
               

               
Cow position:
               
chr21:28237754-28237450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1010-1316
               

               
Cow position:
               
chr21:13842444-13842755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
1010-1334
               

               
Cow position:
               
chr21:33580377-33580690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
1010-1343
               

               
Cow position:
               
chr21:47363782-47363436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
1011-1340
               

               
Cow position:
               
chr21:742245-742561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
1012-1337
               

               
Cow position:
               
chr21:41617782-41617458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
1014-1318
               

               
Cow position:
               
chr21:48527370-48527680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
1017-1248
               

               
Cow position:
               
chr21:29014597-29014365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 211
               

               
Conread position:
               
1017-1337
               

               
Cow position:
               
chr21:10657139-10656820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
1018-1333
               

               
Cow position:
               
chr21:12354730-12354421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
1021-1248
               

               
Cow position:
               
chr21:734563-734784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
1025-1226
               

               
Cow position:
               
chr21:40192330-40192132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
1025-1316
               

               
Cow position:
               
chr21:14126259-14126534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
1025-1325
               

               
Cow position:
               
chr21:20165612-20165910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
1027-1329
               

               
Cow position:
               
chr21:47383585-47383275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
1030-1246
               

               
Cow position:
               
chr21:10538274-10538060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
1030-1335
               

               
Cow position:
               
chr21:28030264-28030560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
1038-1249
               

               
Cow position:
               
chr21:47160201-47160413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
1038-1295
               

               
Cow position:
               
chr21:829226-828969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
1039-1317
               

               
Cow position:
               
chr21:674671-674931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1039-1327
               

               
Cow position:
               
chr21:9256672-9256383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
1043-1327
               

               
Cow position:
               
chr21:7169676-7169962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 187
               

               
Conread position:
               
1044-1236
               

               
Cow position:
               
chr21:41046796-41046989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
1044-1251
               

               
Cow position:
               
chr21:30980586-30980382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1044-1329
               

               
Cow position:
               
chr21:21615766-21616052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 191
               

               
Conread position:
               
1044-1335
               

               
Cow position:
               
chr21:44724373-44724093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
277, 41
               

               
Conread position:
               
1045-1215
               

               
Cow position:
               
chr21:20183064-20183233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1045-1242
               

               
Cow position:
               
chr21:11057882-11057694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1049-1308
               

               
Cow position:
               
chr21:19240880-19240624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
1052-1267
               

               
Cow position:
               
chr21:28599889-28600096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
1052-1313
               

               
Cow position:
               
chr21:46599359-46599617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
1052-1327
               

               
Cow position:
               
chr21:71585-71860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
1052-1329
               

               
Cow position:
               
chr21:36508241-36508504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1052-1344
               

               
Cow position:
               
chr21:8431102-8430808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 272
               

               
Conread position:
               
1055-1317
               

               
Cow position:
               
chr21:12104367-12104616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
97, 151
               

               
Conread position:
               
1055-1317
               

               
Cow position:
               
chr21:19868954-19868699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
1055-1322
               

               
Cow position:
               
chr21:41287792-41287528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
1060-1334
               

               
Cow position:
               
chr21:39319406-39319124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
1060-1340
               

               
Cow position:
               
chr21:29658287-29658559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
1062-1249
               

               
Cow position:
               
chr21:19360167-19359982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1063-1334
               

               
Cow position:
               
chr21:36682332-36682608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
1065-1338
               

               
Cow position:
               
chr21:31652405-31652671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
1067-1335
               

               
Cow position:
               
chr21:17403833-17403565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
1073-1321
               

               
Cow position:
               
chr21:28907522-28907282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
1074-1320
               

               
Cow position:
               
chr21:15271414-15271173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
1078-1325
               

               
Cow position:
               
chr21:20163734-20163979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
1079-1314
               

               
Cow position:
               
chr21:24875378-24875612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
1079-1323
               

               
Cow position:
               
chr21:22850948-22851184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1080-1303
               

               
Cow position:
               
chr21:24266539-24266312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
1080-1320
               

               
Cow position:
               
chr21:17519049-17519294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
1081-1319
               

               
Cow position:
               
chr21:17252950-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
1083-1332
               

               
Cow position:
               
chr21:46451922-46451692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
231, 36
               

               
Conread position:
               
1083-1337
               

               
Cow position:
               
chr21:42328633-42328379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
1087-1330
               

               
Cow position:
               
chr21:41610201-41610457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1087-1331
               

               
Cow position:
               
chr21:6851206-6851442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1087-1335
               

               
Cow position:
               
chr21:48334760-48334503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
1090-1334
               

               
Cow position:
               
chr21:39393785-39394030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
113, 139
               

               
Conread position:
               
1093-1317
               

               
Cow position:
               
chr21:16498559-16498778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1093-1344
               

               
Cow position:
               
chr21:26018419-26018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
153, 92
               

               
Conread position:
               
1096-1249
               

               
Cow position:
               
chr21:5342051-5341899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 132
               

               
Conread position:
               
1102-1279
               

               
Cow position:
               
chr21:30243632-30243460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1103-1334
               

               
Cow position:
               
chr21:3415704-3415937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1103-1343
               

               
Cow position:
               
chr21:37928699-37928939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 182
               

               
Conread position:
               
1105-1321
               

               
Cow position:
               
chr21:40820801-40820584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 107
               

               
Conread position:
               
1106-1317
               

               
Cow position:
               
chr21:25012135-25012341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1106-1318
               

               
Cow position:
               
chr21:11182606-11182813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1107-1343
               

               
Cow position:
               
chr21:15012493-15012723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
211, 121
               

               
Conread position:
               
1110-1342
               

               
Cow position:
               
chr21:13090431-13090665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1111-1317
               

               
Cow position:
               
chr21:30657928-30658124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1113-1339
               

               
Cow position:
               
chr21:20174378-20174599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
206, 115
               

               
Conread position:
               
1118-1299
               

               
Cow position:
               
chr21:8506481-8506302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1118-1299
               

               
Cow position:
               
chr21:8509369-8509190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1122-1325
               

               
Cow position:
               
chr21:13883550-13883747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
1123-1343
               

               
Cow position:
               
chr21:22211323-22211543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 201
               

               
Conread position:
               
1128-1339
               

               
Cow position:
               
chr21:4585081-4584870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 194
               

               
Conread position:
               
1133-1320
               

               
Cow position:
               
chr21:27744105-27744295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
1148-1303
               

               
Cow position:
               
chr21:40930380-40930227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1327
               

               
Cow position:
               
chr21:44732948-44732769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
166, 9
               

               
Conread position:
               
1148-1338
               

               
Cow position:
               
chr21:37495851-37495658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
1148-1340
               

               
Cow position:
               
chr21:29011875-29011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1149-1314
               

               
Cow position:
               
chr21:31462658-31462817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1152-1331
               

               
Cow position:
               
chr21:18056030-18055851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1157-1299
               

               
Cow position:
               
chr21:36398459-36398323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1157-1313
               

               
Cow position:
               
chr21:16120057-16119903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1157-1336
               

               
Cow position:
               
chr21:45376052-45376231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
1161-1299
               

               
Cow position:
               
chr21:7424906-7424768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
1166-1317
               

               
Cow position:
               
chr21:17856878-17857028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1174-1343
               

               
Cow position:
               
chr21:42341817-42341652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1177-1331
               

               
Cow position:
               
chr21:37479469-37479311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1197-1343
               

               
Cow position:
               
chr21:35337779-35337637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.