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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
818-1080
               

               
Cow position:
               
chr24:7301125-7301401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
820-1246
               

               
Cow position:
               
chr24:18331408-18331825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
824-984
               

               
Cow position:
               
chr24:14550182-14550340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
826-1069
               

               
Cow position:
               
chr24:21252772-21252519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
828-1327
               

               
Cow position:
               
chr24:18734680-18734195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
829-1107
               

               
Cow position:
               
chr24:17720409-17720127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
829-1131
               

               
Cow position:
               
chr24:12293705-12294018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
830-1165
               

               
Cow position:
               
chr24:34564810-34565146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
830-1237
               

               
Cow position:
               
chr24:33230348-33230768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
830-1295
               

               
Cow position:
               
chr24:9222694-9222227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
157, 11
               

               
Conread position:
               
830-1325
               

               
Cow position:
               
chr24:17311527-17311045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
831-984
               

               
Cow position:
               
chr24:32456108-32456261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
831-1112
               

               
Cow position:
               
chr24:21768324-21768616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 272
               

               
Conread position:
               
831-1172
               

               
Cow position:
               
chr24:39842167-39841813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
832-1081
               

               
Cow position:
               
chr24:42916845-42916596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
832-1084
               

               
Cow position:
               
chr24:5607452-5607194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
832-1096
               

               
Cow position:
               
chr24:8770266-8770542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
832-1319
               

               
Cow position:
               
chr24:3493576-3494058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
833-1069
               

               
Cow position:
               
chr24:11006899-11007149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
833-1069
               

               
Cow position:
               
chr24:38374968-38375214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
833-1319
               

               
Cow position:
               
chr24:24755143-24755606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
833-1327
               

               
Cow position:
               
chr24:26929264-26928754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
834-1058
               

               
Cow position:
               
chr24:5643897-5643660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
834-1110
               

               
Cow position:
               
chr24:33238864-33238573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 211
               

               
Conread position:
               
834-1246
               

               
Cow position:
               
chr24:39159859-39159441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
834-1316
               

               
Cow position:
               
chr24:39850192-39849718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
834-1325
               

               
Cow position:
               
chr24:33621801-33621295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 195
               

               
Conread position:
               
834-1336
               

               
Cow position:
               
chr24:19535558-19535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
835-1319
               

               
Cow position:
               
chr24:2675017-2675513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
836-1011
               

               
Cow position:
               
chr24:25777561-25777387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 150
               

               
Conread position:
               
836-1100
               

               
Cow position:
               
chr24:43733657-43733929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
837-1111
               

               
Cow position:
               
chr24:35405883-35405594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
839-1060
               

               
Cow position:
               
chr24:28600923-28600695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
839-1134
               

               
Cow position:
               
chr24:36486369-36486072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
839-1338
               

               
Cow position:
               
chr24:6450206-6450704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
839-1343
               

               
Cow position:
               
chr24:34272492-34273020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 271
               

               
Conread position:
               
840-1272
               

               
Cow position:
               
chr24:39440867-39440435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 247
               

               
Conread position:
               
840-1325
               

               
Cow position:
               
chr24:2402683-2402194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
841-1077
               

               
Cow position:
               
chr24:21264814-21264571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
841-1080
               

               
Cow position:
               
chr24:40056027-40055788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
841-1082
               

               
Cow position:
               
chr24:14363388-14363145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
841-1083
               

               
Cow position:
               
chr24:37876929-37877177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
841-1089
               

               
Cow position:
               
chr24:27809871-27810137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
841-1151
               

               
Cow position:
               
chr24:16298451-16298767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
841-1279
               

               
Cow position:
               
chr24:42345316-42344857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
841-1320
               

               
Cow position:
               
chr24:33098795-33098294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
841-1329
               

               
Cow position:
               
chr24:18732430-18731923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
841-1338
               

               
Cow position:
               
chr24:38814662-38815170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
841-1339
               

               
Cow position:
               
chr24:7917677-7917183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
842-972
               

               
Cow position:
               
chr24:38655399-38655269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-976
               

               
Cow position:
               
chr24:4616053-4615919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr24:26384964-26384825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr24:35066770-35066632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr24:38297080-38297220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr24:37037310-37037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr24:5624539-5624396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr24:8021269-8021413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr24:29606374-29606235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
842-1002
               

               
Cow position:
               
chr24:27754389-27754545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
842-1004
               

               
Cow position:
               
chr24:36710833-36711001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr24:30768403-30768567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
842-1020
               

               
Cow position:
               
chr24:33379748-33379935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
842-1041
               

               
Cow position:
               
chr24:22193418-22193630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1055
               

               
Cow position:
               
chr24:21104672-21104896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1063
               

               
Cow position:
               
chr24:40149375-40149158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
842-1080
               

               
Cow position:
               
chr24:14279580-14279833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 232
               

               
Conread position:
               
842-1083
               

               
Cow position:
               
chr24:32360835-32360579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 243
               

               
Conread position:
               
842-1084
               

               
Cow position:
               
chr24:27543783-27543533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
136, 238
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr24:18257377-18257125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
145, 116
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr24:3631210-3631458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
113, 98
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr24:16557990-16557732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 240
               

               
Conread position:
               
842-1093
               

               
Cow position:
               
chr24:35795590-35795324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
842-1094
               

               
Cow position:
               
chr24:20970099-20969845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
135, 123
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr24:8873375-8873114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 257
               

               
Conread position:
               
842-1098
               

               
Cow position:
               
chr24:21770143-21770399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
160, 143
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr24:6161152-6160891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
842-1100
               

               
Cow position:
               
chr24:37205183-37204921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
842-1103
               

               
Cow position:
               
chr24:31370055-31369788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
842-1104
               

               
Cow position:
               
chr24:37246525-37246246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr24:6340710-6340979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 117
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr24:24498479-24498211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 203
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr24:40908709-40908993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
117, 98
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr24:12090995-12091272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 244
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr24:13880749-13881026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr24:31067031-31066758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
131, 258
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr24:35572180-35572450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr24:38684410-38684137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
842-1114
               

               
Cow position:
               
chr24:1272176-1271902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
170, 144
               

               
Conread position:
               
842-1115
               

               
Cow position:
               
chr24:18266479-18266188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
842-1127
               

               
Cow position:
               
chr24:6325348-6325051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr24:11748110-11747824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 192
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr24:20221213-20221507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
131, 258
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr24:28353852-28354141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr24:42693715-42693415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1132
               

               
Cow position:
               
chr24:6160391-6160095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
842-1133
               

               
Cow position:
               
chr24:16625808-16625494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 277
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr24:18405611-18405312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr24:32212977-32212668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 210
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr24:39219153-39218841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
842-1143
               

               
Cow position:
               
chr24:42007439-42007742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
842-1144
               

               
Cow position:
               
chr24:193110-193421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 238
               

               
Conread position:
               
842-1146
               

               
Cow position:
               
chr24:36555135-36554829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
842-1149
               

               
Cow position:
               
chr24:634683-634985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
842-1150
               

               
Cow position:
               
chr24:30177929-30178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
842-1157
               

               
Cow position:
               
chr24:27052799-27052478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
842-1178
               

               
Cow position:
               
chr24:20024300-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 278
               

               
Conread position:
               
842-1187
               

               
Cow position:
               
chr24:3152882-3152532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr24:27341331-27340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1208
               

               
Cow position:
               
chr24:29180594-29180952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 48
               

               
Conread position:
               
842-1210
               

               
Cow position:
               
chr24:6149723-6150091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
842-1213
               

               
Cow position:
               
chr24:43506820-43506440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
842-1216
               

               
Cow position:
               
chr24:23616388-23616771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
842-1216
               

               
Cow position:
               
chr24:32370218-32369840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
842-1222
               

               
Cow position:
               
chr24:20741015-20741404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 118
               

               
Conread position:
               
842-1225
               

               
Cow position:
               
chr24:25677725-25678107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr24:29679619-29679228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 209
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr24:201940-201530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr24:12851428-12851813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr24:29673212-29673630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 374
               

               
Conread position:
               
842-1250
               

               
Cow position:
               
chr24:3663878-3664283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr24:18970795-18970397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 17
               

               
Conread position:
               
842-1251
               

               
Cow position:
               
chr24:32158574-32158164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
842-1279
               

               
Cow position:
               
chr24:32054364-32054790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
842-1281
               

               
Cow position:
               
chr24:5754534-5754967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 102
               

               
Conread position:
               
842-1291
               

               
Cow position:
               
chr24:29781855-29782313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1294
               

               
Cow position:
               
chr24:20988307-20987873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
193, 93
               

               
Conread position:
               
842-1302
               

               
Cow position:
               
chr24:23556636-23556177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr24:18741878-18741404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 248
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr24:36174090-36173618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 249
               

               
Conread position:
               
842-1313
               

               
Cow position:
               
chr24:28553853-28553401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr24:211674-212145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 263
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr24:33372251-33372721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr24:44987681-44987194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr24:28062634-28063128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 241
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr24:38347372-38347854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 265
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr24:24002671-24003137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr24:27906121-27906620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 201
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr24:35332412-35332911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr24:11886855-11887340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
842-1329
               

               
Cow position:
               
chr24:31159319-31159818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr24:19658240-19658726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 251
               

               
Conread position:
               
842-1333
               

               
Cow position:
               
chr24:27844827-27844344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 199
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr24:30235571-30236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
842-1337
               

               
Cow position:
               
chr24:39483169-39483658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr24:32609331-32609844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 379
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr24:32205103-32204589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 259
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr24:20225430-20225945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 248
               

               
Conread position:
               
842-1343
               

               
Cow position:
               
chr24:11839873-11840386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr24:31811880-31812385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
843-1336
               

               
Cow position:
               
chr24:40300849-40301351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 126
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr24:15666714-15666574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr24:37975374-37975239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
845-1018
               

               
Cow position:
               
chr24:28689406-28689584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
845-1087
               

               
Cow position:
               
chr24:35568885-35569132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
139, 51
               

               
Conread position:
               
845-1111
               

               
Cow position:
               
chr24:39492992-39493267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
845-1126
               

               
Cow position:
               
chr24:42581135-42580856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
845-1150
               

               
Cow position:
               
chr24:15473051-15473367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 244
               

               
Conread position:
               
845-1216
               

               
Cow position:
               
chr24:7001373-7000989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 257
               

               
Conread position:
               
845-1222
               

               
Cow position:
               
chr24:44054446-44054087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
226, 113
               

               
Conread position:
               
845-1272
               

               
Cow position:
               
chr24:19466237-19465785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
845-1288
               

               
Cow position:
               
chr24:32693398-32693867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
138, 193
               

               
Conread position:
               
845-1313
               

               
Cow position:
               
chr24:29596115-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
845-1320
               

               
Cow position:
               
chr24:44041314-44040834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
845-1321
               

               
Cow position:
               
chr24:15288553-15289006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 141
               

               
Conread position:
               
845-1325
               

               
Cow position:
               
chr24:2391887-2392370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 190
               

               
Conread position:
               
845-1327
               

               
Cow position:
               
chr24:27874298-27874758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 239
               

               
Conread position:
               
845-1335
               

               
Cow position:
               
chr24:34532819-34533330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
140, 231
               

               
Conread position:
               
845-1336
               

               
Cow position:
               
chr24:9070739-9070249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
845-1339
               

               
Cow position:
               
chr24:34274457-34274936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
846-1186
               

               
Cow position:
               
chr24:32124946-32124593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
847-989
               

               
Cow position:
               
chr24:12498695-12498835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
847-1050
               

               
Cow position:
               
chr24:20923297-20923494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
847-1051
               

               
Cow position:
               
chr24:6956878-6957087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
847-1064
               

               
Cow position:
               
chr24:27465874-27465653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
847-1084
               

               
Cow position:
               
chr24:5435346-5435100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
847-1128
               

               
Cow position:
               
chr24:15881115-15881407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
847-1134
               

               
Cow position:
               
chr24:10308972-10309250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr24:29027747-29028040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
847-1192
               

               
Cow position:
               
chr24:28600156-28599809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
847-1232
               

               
Cow position:
               
chr24:15246938-15246552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 199
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr24:27290575-27290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr24:33153480-33153883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 193
               

               
Conread position:
               
847-1251
               

               
Cow position:
               
chr24:31309119-31309501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 155
               

               
Conread position:
               
847-1252
               

               
Cow position:
               
chr24:814567-814159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
112, 201
               

               
Conread position:
               
847-1288
               

               
Cow position:
               
chr24:20874374-20874826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 344
               

               
Conread position:
               
847-1299
               

               
Cow position:
               
chr24:17407091-17407548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
847-1320
               

               
Cow position:
               
chr24:25320687-25321163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 242
               

               
Conread position:
               
847-1321
               

               
Cow position:
               
chr24:28699293-28699764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
847-1333
               

               
Cow position:
               
chr24:42862348-42862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
847-1343
               

               
Cow position:
               
chr24:27267333-27267812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
847-1344
               

               
Cow position:
               
chr24:6071293-6071797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
191, 49
               

               
Conread position:
               
848-944
               

               
Cow position:
               
chr24:16645907-16645811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-979
               

               
Cow position:
               
chr24:34579184-34579315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-980
               

               
Cow position:
               
chr24:5448367-5448235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-985
               

               
Cow position:
               
chr24:39289715-39289844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
848-1089
               

               
Cow position:
               
chr24:27763501-27763740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
848-1115
               

               
Cow position:
               
chr24:6914065-6913789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
848-1146
               

               
Cow position:
               
chr24:34315058-34315364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
848-1150
               

               
Cow position:
               
chr24:27270491-27270782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
848-1216
               

               
Cow position:
               
chr24:28690399-28690759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
848-1238
               

               
Cow position:
               
chr24:29063947-29063564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
848-1288
               

               
Cow position:
               
chr24:16870087-16869636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 230
               

               
Conread position:
               
848-1333
               

               
Cow position:
               
chr24:18485301-18484800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 319
               

               
Conread position:
               
848-1344
               

               
Cow position:
               
chr24:3165520-3166021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 172
               

               
Conread position:
               
849-1089
               

               
Cow position:
               
chr24:27720052-27719804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
849-1319
               

               
Cow position:
               
chr24:28496888-28496406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
850-985
               

               
Cow position:
               
chr24:28233092-28233224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
850-1061
               

               
Cow position:
               
chr24:39238497-39238717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
851-981
               

               
Cow position:
               
chr24:41985679-41985808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
851-1126
               

               
Cow position:
               
chr24:6154526-6154797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
216, 114
               

               
Conread position:
               
851-1221
               

               
Cow position:
               
chr24:43364066-43364438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
852-985
               

               
Cow position:
               
chr24:19804390-19804523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
852-1201
               

               
Cow position:
               
chr24:32739909-32739558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
852-1240
               

               
Cow position:
               
chr24:24250436-24250821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
852-1342
               

               
Cow position:
               
chr24:43028622-43028128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
853-1088
               

               
Cow position:
               
chr24:27558001-27557753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
853-1123
               

               
Cow position:
               
chr24:11876587-11876870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 115
               

               
Conread position:
               
854-985
               

               
Cow position:
               
chr24:43693039-43692911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
855-1319
               

               
Cow position:
               
chr24:17104861-17104395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
855-1334
               

               
Cow position:
               
chr24:35986013-35985541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
856-1034
               

               
Cow position:
               
chr24:45216402-45216221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
856-1232
               

               
Cow position:
               
chr24:28319495-28319118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 190
               

               
Conread position:
               
857-1008
               

               
Cow position:
               
chr24:43832067-43832224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
857-1224
               

               
Cow position:
               
chr24:25991437-25991098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
858-1098
               

               
Cow position:
               
chr24:7030442-7030196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
858-1125
               

               
Cow position:
               
chr24:27941297-27941029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
859-980
               

               
Cow position:
               
chr24:7023104-7023225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
859-986
               

               
Cow position:
               
chr24:6677212-6677334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
859-1088
               

               
Cow position:
               
chr24:44702688-44702927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
859-1096
               

               
Cow position:
               
chr24:27633123-27633365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
113, 174
               

               
Conread position:
               
859-1131
               

               
Cow position:
               
chr24:24137141-24136871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
859-1134
               

               
Cow position:
               
chr24:14729119-14729396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
859-1137
               

               
Cow position:
               
chr24:16267504-16267768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
859-1200
               

               
Cow position:
               
chr24:23685351-23685009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 106
               

               
Conread position:
               
859-1203
               

               
Cow position:
               
chr24:15508824-15508482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
859-1215
               

               
Cow position:
               
chr24:6508053-6507697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
859-1236
               

               
Cow position:
               
chr24:16268393-16268036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
859-1245
               

               
Cow position:
               
chr24:8886626-8887014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
859-1248
               

               
Cow position:
               
chr24:1438557-1438164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
859-1248
               

               
Cow position:
               
chr24:35150240-35150625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr24:16556921-16556534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
859-1253
               

               
Cow position:
               
chr24:34369296-34368894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
859-1292
               

               
Cow position:
               
chr24:27096396-27096844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
859-1304
               

               
Cow position:
               
chr24:31816295-31816737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr24:34742459-34742926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr24:42103086-42103538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
859-1325
               

               
Cow position:
               
chr24:17860541-17860079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 102
               

               
Conread position:
               
859-1327
               

               
Cow position:
               
chr24:27608384-27607926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
859-1336
               

               
Cow position:
               
chr24:23695185-23694715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr24:6102543-6103025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
859-1344
               

               
Cow position:
               
chr24:28303638-28303159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
860-985
               

               
Cow position:
               
chr24:32668987-32669113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
860-1099
               

               
Cow position:
               
chr24:591621-591874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
860-1102
               

               
Cow position:
               
chr24:38266904-38267149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 231
               

               
Conread position:
               
860-1217
               

               
Cow position:
               
chr24:27683731-27683382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
159, 126
               

               
Conread position:
               
860-1222
               

               
Cow position:
               
chr24:18974912-18975290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
860-1222
               

               
Cow position:
               
chr24:29170676-29171042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 182
               

               
Conread position:
               
860-1224
               

               
Cow position:
               
chr24:43432513-43432871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
860-1315
               

               
Cow position:
               
chr24:33944118-33944579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 82
               

               
Conread position:
               
860-1326
               

               
Cow position:
               
chr24:15057114-15057568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
860-1340
               

               
Cow position:
               
chr24:30484232-30483748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
860-1343
               

               
Cow position:
               
chr24:5141652-5142141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
861-1140
               

               
Cow position:
               
chr24:35795028-35794736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
861-1275
               

               
Cow position:
               
chr24:27726292-27725878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
861-1336
               

               
Cow position:
               
chr24:28699769-28700237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
863-1024
               

               
Cow position:
               
chr24:11874917-11874749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
863-1252
               

               
Cow position:
               
chr24:11118994-11119384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 233
               

               
Conread position:
               
863-1303
               

               
Cow position:
               
chr24:35073806-35074243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
103, 238
               

               
Conread position:
               
864-1085
               

               
Cow position:
               
chr24:30900512-30900283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
864-1221
               

               
Cow position:
               
chr24:3430450-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
864-1244
               

               
Cow position:
               
chr24:17955733-17955344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
864-1248
               

               
Cow position:
               
chr24:43200559-43200171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
864-1313
               

               
Cow position:
               
chr24:18374488-18374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 206
               

               
Conread position:
               
864-1327
               

               
Cow position:
               
chr24:30229181-30229658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
864-1338
               

               
Cow position:
               
chr24:25111917-25112393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 102
               

               
Conread position:
               
865-1129
               

               
Cow position:
               
chr24:27967796-27968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
112, 168
               

               
Conread position:
               
865-1315
               

               
Cow position:
               
chr24:25885442-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 311
               

               
Conread position:
               
865-1318
               

               
Cow position:
               
chr24:41980947-41980484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
868-1321
               

               
Cow position:
               
chr24:35675262-35675710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 206
               

               
Conread position:
               
869-957
               

               
Cow position:
               
chr24:19502-19413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
869-1282
               

               
Cow position:
               
chr24:25424783-25425167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 175
               

               
Conread position:
               
870-981
               

               
Cow position:
               
chr24:20594347-20594236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
870-1049
               

               
Cow position:
               
chr24:2730849-2730662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
870-1081
               

               
Cow position:
               
chr24:40974729-40974939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
870-1086
               

               
Cow position:
               
chr24:39681576-39681800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
870-1099
               

               
Cow position:
               
chr24:6900545-6900787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
870-1130
               

               
Cow position:
               
chr24:17567111-17567374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 215
               

               
Conread position:
               
870-1166
               

               
Cow position:
               
chr24:39955325-39955025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 166
               

               
Conread position:
               
870-1183
               

               
Cow position:
               
chr24:17159467-17159792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
117, 213
               

               
Conread position:
               
870-1203
               

               
Cow position:
               
chr24:32823061-32822709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
870-1203
               

               
Cow position:
               
chr24:39350487-39350154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
870-1222
               

               
Cow position:
               
chr24:27748375-27748721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
870-1243
               

               
Cow position:
               
chr24:40129846-40130229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
870-1245
               

               
Cow position:
               
chr24:40849885-40850255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
870-1249
               

               
Cow position:
               
chr24:14648614-14648253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
175, 90
               

               
Conread position:
               
870-1261
               

               
Cow position:
               
chr24:2108531-2108122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
870-1313
               

               
Cow position:
               
chr24:37650391-37650846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 329
               

               
Conread position:
               
870-1326
               

               
Cow position:
               
chr24:7913719-7914191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 468
               

               
Conread position:
               
870-1330
               

               
Cow position:
               
chr24:34761617-34762081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
870-1342
               

               
Cow position:
               
chr24:24491293-24490826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 188
               

               
Conread position:
               
871-1131
               

               
Cow position:
               
chr24:40184344-40184614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
871-1215
               

               
Cow position:
               
chr24:18243743-18243393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
871-1331
               

               
Cow position:
               
chr24:40592443-40592902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
872-984
               

               
Cow position:
               
chr24:28289706-28289598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
872-1191
               

               
Cow position:
               
chr24:30545133-30544816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
105, 226
               

               
Conread position:
               
872-1245
               

               
Cow position:
               
chr24:36404424-36404040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
872-1275
               

               
Cow position:
               
chr24:18025248-18024836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
872-1303
               

               
Cow position:
               
chr24:17294464-17294034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 251
               

               
Conread position:
               
872-1342
               

               
Cow position:
               
chr24:1269527-1269978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
872-1344
               

               
Cow position:
               
chr24:30314313-30313822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 212
               

               
Conread position:
               
873-1077
               

               
Cow position:
               
chr24:18324339-18324559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
873-1249
               

               
Cow position:
               
chr24:19769222-19769601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 88
               

               
Conread position:
               
874-1186
               

               
Cow position:
               
chr24:25229332-25229019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
874-1299
               

               
Cow position:
               
chr24:43370973-43371400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 214
               

               
Conread position:
               
874-1341
               

               
Cow position:
               
chr24:15861876-15861391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 304
               

               
Conread position:
               
875-1082
               

               
Cow position:
               
chr24:42380976-42380769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
875-1114
               

               
Cow position:
               
chr24:35529649-35529891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 135
               

               
Conread position:
               
875-1137
               

               
Cow position:
               
chr24:17363919-17363652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
875-1249
               

               
Cow position:
               
chr24:18390562-18390195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
876-1303
               

               
Cow position:
               
chr24:23442854-23442420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
878-1058
               

               
Cow position:
               
chr24:21522828-21523019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 189
               

               
Conread position:
               
879-1118
               

               
Cow position:
               
chr24:11734452-11734700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 160
               

               
Conread position:
               
879-1339
               

               
Cow position:
               
chr24:16994624-16995075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
881-1148
               

               
Cow position:
               
chr24:5151967-5152238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
882-985
               

               
Cow position:
               
chr24:25950934-25950834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
883-1117
               

               
Cow position:
               
chr24:21860486-21860246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
883-1199
               

               
Cow position:
               
chr24:45004688-45005005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 127
               

               
Conread position:
               
883-1344
               

               
Cow position:
               
chr24:27149135-27149585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
885-1321
               

               
Cow position:
               
chr24:29388982-29389396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
886-1225
               

               
Cow position:
               
chr24:39226735-39227078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
94, 143
               

               
Conread position:
               
886-1234
               

               
Cow position:
               
chr24:2970870-2970518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 232
               

               
Conread position:
               
887-991
               

               
Cow position:
               
chr24:11263141-11263245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
888-1331
               

               
Cow position:
               
chr24:42825759-42825328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 207
               

               
Conread position:
               
889-1005
               

               
Cow position:
               
chr24:19736634-19736516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
890-1330
               

               
Cow position:
               
chr24:27039779-27040238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 242
               

               
Conread position:
               
892-1222
               

               
Cow position:
               
chr24:31324024-31324365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
893-1224
               

               
Cow position:
               
chr24:43927577-43927250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
893-1337
               

               
Cow position:
               
chr24:44869758-44870187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
97, 149
               

               
Conread position:
               
894-1251
               

               
Cow position:
               
chr24:41068013-41068371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
894-1273
               

               
Cow position:
               
chr24:19261605-19261251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
896-1117
               

               
Cow position:
               
chr24:27207448-27207219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 195
               

               
Conread position:
               
898-1335
               

               
Cow position:
               
chr24:17943416-17942983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
899-1175
               

               
Cow position:
               
chr24:6487670-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
899-1251
               

               
Cow position:
               
chr24:27824214-27824569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
900-1288
               

               
Cow position:
               
chr24:20942920-20943306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
900-1320
               

               
Cow position:
               
chr24:18474997-18474551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
901-1222
               

               
Cow position:
               
chr24:2096137-2095801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
905-1337
               

               
Cow position:
               
chr24:10498966-10499411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
906-1246
               

               
Cow position:
               
chr24:24457491-24457148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
910-1244
               

               
Cow position:
               
chr24:34008821-34008472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
911-1246
               

               
Cow position:
               
chr24:33222178-33221829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 331
               

               
Conread position:
               
911-1327
               

               
Cow position:
               
chr24:17285236-17284795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 313
               

               
Conread position:
               
913-1135
               

               
Cow position:
               
chr24:18695385-18695616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 186
               

               
Conread position:
               
913-1319
               

               
Cow position:
               
chr24:19179681-19179259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
913-1321
               

               
Cow position:
               
chr24:25194030-25194445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
71, 188
               

               
Conread position:
               
913-1344
               

               
Cow position:
               
chr24:18343812-18344266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 434
               

               
Conread position:
               
918-1278
               

               
Cow position:
               
chr24:20250135-20249757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
920-1248
               

               
Cow position:
               
chr24:28327312-28326973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 211
               

               
Conread position:
               
920-1319
               

               
Cow position:
               
chr24:34396402-34396013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
923-1116
               

               
Cow position:
               
chr24:22263307-22263503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
923-1166
               

               
Cow position:
               
chr24:21918444-21918203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
923-1175
               

               
Cow position:
               
chr24:10012546-10012786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
924-1297
               

               
Cow position:
               
chr24:22224952-22225346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 177
               

               
Conread position:
               
926-1284
               

               
Cow position:
               
chr24:31359099-31359460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
927-1327
               

               
Cow position:
               
chr24:29540133-29539743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
928-1174
               

               
Cow position:
               
chr24:39833737-39833482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
932-1324
               

               
Cow position:
               
chr24:16509755-16510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
932-1339
               

               
Cow position:
               
chr24:39143388-39143807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
934-1246
               

               
Cow position:
               
chr24:15373194-15373508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
934-1331
               

               
Cow position:
               
chr24:16645537-16645132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
935-1083
               

               
Cow position:
               
chr24:17938562-17938704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
941-1288
               

               
Cow position:
               
chr24:28990357-28990708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
942-1205
               

               
Cow position:
               
chr24:15707650-15707381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
942-1304
               

               
Cow position:
               
chr24:7476557-7476188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
942-1340
               

               
Cow position:
               
chr24:352812-352407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
946-1278
               

               
Cow position:
               
chr24:17833012-17832684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
973-1336
               

               
Cow position:
               
chr24:41405731-41406099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
978-1222
               

               
Cow position:
               
chr24:30897703-30897457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
8, 228
               

               
Conread position:
               
978-1303
               

               
Cow position:
               
chr24:17752278-17751947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
979-1245
               

               
Cow position:
               
chr24:32070802-32071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
979-1319
               

               
Cow position:
               
chr24:18357217-18356875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
982-1286
               

               
Cow position:
               
chr24:6912511-6912214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
985-1134
               

               
Cow position:
               
chr24:4615676-4615527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
985-1244
               

               
Cow position:
               
chr24:28289405-28289153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
985-1303
               

               
Cow position:
               
chr24:41423452-41423757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
985-1320
               

               
Cow position:
               
chr24:16089079-16089407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
235, 58
               

               
Conread position:
               
985-1327
               

               
Cow position:
               
chr24:7777773-7777449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
320, 70
               

               
Conread position:
               
985-1331
               

               
Cow position:
               
chr24:19800689-19801032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
985-1340
               

               
Cow position:
               
chr24:6132030-6131690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
98, 175
               

               
Conread position:
               
985-1342
               

               
Cow position:
               
chr24:37037742-37038087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
986-1248
               

               
Cow position:
               
chr24:23187073-23186811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
986-1303
               

               
Cow position:
               
chr24:27630247-27630560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
986-1343
               

               
Cow position:
               
chr24:27220247-27219887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
987-1222
               

               
Cow position:
               
chr24:43967656-43967423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 196
               

               
Conread position:
               
987-1235
               

               
Cow position:
               
chr24:41512104-41511864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
990-1225
               

               
Cow position:
               
chr24:19736481-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
990-1320
               

               
Cow position:
               
chr24:18281787-18281457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
994-1235
               

               
Cow position:
               
chr24:24662277-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
995-1285
               

               
Cow position:
               
chr24:12200560-12200264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 220
               

               
Conread position:
               
996-1334
               

               
Cow position:
               
chr24:389956-390293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
999-1243
               

               
Cow position:
               
chr24:8006168-8006406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
1004-1303
               

               
Cow position:
               
chr24:28233911-28234202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
1005-1330
               

               
Cow position:
               
chr24:10242918-10242597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
1009-1248
               

               
Cow position:
               
chr24:24061943-24061702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
1009-1319
               

               
Cow position:
               
chr24:29606176-29605856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
1010-1303
               

               
Cow position:
               
chr24:35631855-35632142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
1010-1313
               

               
Cow position:
               
chr24:27713536-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
1011-1279
               

               
Cow position:
               
chr24:26554729-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
1012-1252
               

               
Cow position:
               
chr24:14457853-14457615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
1012-1286
               

               
Cow position:
               
chr24:42004046-42004316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
1012-1320
               

               
Cow position:
               
chr24:13352914-13353204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1015-1236
               

               
Cow position:
               
chr24:32095193-32095402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1015-1303
               

               
Cow position:
               
chr24:29561701-29561418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
1016-1340
               

               
Cow position:
               
chr24:39523573-39523251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
1017-1249
               

               
Cow position:
               
chr24:39791414-39791648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 211
               

               
Conread position:
               
1021-1341
               

               
Cow position:
               
chr24:37267540-37267862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 305
               

               
Conread position:
               
1026-1303
               

               
Cow position:
               
chr24:20807421-20807685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
257, 54
               

               
Conread position:
               
1030-1318
               

               
Cow position:
               
chr24:37975093-37974807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
1030-1338
               

               
Cow position:
               
chr24:8392765-8393063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
196, 14
               

               
Conread position:
               
1031-1340
               

               
Cow position:
               
chr24:3656477-3656168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
1038-1327
               

               
Cow position:
               
chr24:230172-230465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 207
               

               
Conread position:
               
1039-1318
               

               
Cow position:
               
chr24:37823427-37823700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1039-1336
               

               
Cow position:
               
chr24:23575258-23574967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
1042-1248
               

               
Cow position:
               
chr24:28042874-28043080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 188
               

               
Conread position:
               
1044-1224
               

               
Cow position:
               
chr24:30308653-30308475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
1044-1244
               

               
Cow position:
               
chr24:18614903-18615101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
1044-1306
               

               
Cow position:
               
chr24:28342254-28342526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1044-1342
               

               
Cow position:
               
chr24:39911133-39910832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
1045-1318
               

               
Cow position:
               
chr24:18755661-18755936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
1046-1343
               

               
Cow position:
               
chr24:13948027-13948323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
1047-1319
               

               
Cow position:
               
chr24:20364503-20364239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
1049-1317
               

               
Cow position:
               
chr24:27349271-27349001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
1051-1326
               

               
Cow position:
               
chr24:27284731-27285008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
180, 84
               

               
Conread position:
               
1054-1303
               

               
Cow position:
               
chr24:25122267-25122498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1058-1203
               

               
Cow position:
               
chr24:44145497-44145640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1058-1325
               

               
Cow position:
               
chr24:18442643-18442387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
1060-1294
               

               
Cow position:
               
chr24:10536273-10536507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
171, 146
               

               
Conread position:
               
1060-1334
               

               
Cow position:
               
chr24:13587068-13586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1066-1330
               

               
Cow position:
               
chr24:2992952-2992692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
1069-1303
               

               
Cow position:
               
chr24:41916183-41916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
1071-1339
               

               
Cow position:
               
chr24:2379888-2380152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 26
               

               
Conread position:
               
1073-1343
               

               
Cow position:
               
chr24:8676756-8677026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
1078-1331
               

               
Cow position:
               
chr24:28510733-28510982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
1079-1315
               

               
Cow position:
               
chr24:42175468-42175698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1079-1318
               

               
Cow position:
               
chr24:21835019-21834787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1079-1343
               

               
Cow position:
               
chr24:18137370-18137101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
1081-1315
               

               
Cow position:
               
chr24:33244336-33244559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
1081-1324
               

               
Cow position:
               
chr24:5360660-5360893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1083-1321
               

               
Cow position:
               
chr24:42984334-42984574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
163, 14
               

               
Conread position:
               
1084-1251
               

               
Cow position:
               
chr24:28689608-28689780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
1087-1340
               

               
Cow position:
               
chr24:37651671-37651919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
196, 141
               

               
Conread position:
               
1089-1334
               

               
Cow position:
               
chr24:19186890-19187122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1090-1332
               

               
Cow position:
               
chr24:29985036-29984797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
1093-1251
               

               
Cow position:
               
chr24:17375590-17375745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1095-1246
               

               
Cow position:
               
chr24:42981805-42981659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1097-1331
               

               
Cow position:
               
chr24:42687804-42688031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
225, 59
               

               
Conread position:
               
1098-1327
               

               
Cow position:
               
chr24:22133128-22133351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
202, 130
               

               
Conread position:
               
1102-1327
               

               
Cow position:
               
chr24:42226234-42226449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
1105-1326
               

               
Cow position:
               
chr24:32891080-32890862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
199, 123
               

               
Conread position:
               
1108-1308
               

               
Cow position:
               
chr24:32230541-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
1108-1327
               

               
Cow position:
               
chr24:7757739-7757955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
206, 120
               

               
Conread position:
               
1110-1342
               

               
Cow position:
               
chr24:36286538-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1115-1334
               

               
Cow position:
               
chr24:3412657-3412873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1119-1334
               

               
Cow position:
               
chr24:6886989-6887196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1122-1330
               

               
Cow position:
               
chr24:161984-162194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
1122-1334
               

               
Cow position:
               
chr24:6008190-6007980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
1122-1339
               

               
Cow position:
               
chr24:39904023-39903812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
1125-1337
               

               
Cow position:
               
chr24:39304937-39304717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
1125-1341
               

               
Cow position:
               
chr24:17689627-17689412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
1128-1344
               

               
Cow position:
               
chr24:27940634-27940425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
1140-1331
               

               
Cow position:
               
chr24:358365-358561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
1145-1338
               

               
Cow position:
               
chr24:24091336-24091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1147-1331
               

               
Cow position:
               
chr24:42146216-42146392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1148-1317
               

               
Cow position:
               
chr24:30325777-30325607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
1148-1318
               

               
Cow position:
               
chr24:25947855-25947683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
1148-1337
               

               
Cow position:
               
chr24:28256052-28255869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1148-1342
               

               
Cow position:
               
chr24:7275710-7275896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1152-1339
               

               
Cow position:
               
chr24:26588231-26588415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1152-1343
               

               
Cow position:
               
chr24:22129627-22129438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
1154-1339
               

               
Cow position:
               
chr24:26569470-26569656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
1157-1329
               

               
Cow position:
               
chr24:27413095-27412927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1158-1312
               

               
Cow position:
               
chr24:24540474-24540322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
1160-1330
               

               
Cow position:
               
chr24:38428094-38427922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1160-1342
               

               
Cow position:
               
chr24:6488227-6488407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
156, 68
               

               
Conread position:
               
1160-1342
               

               
Cow position:
               
chr24:21656425-21656610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1166-1332
               

               
Cow position:
               
chr24:24136378-24136218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1173-1327
               

               
Cow position:
               
chr24:41925854-41926002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
146, 59
               
Show alignments to all cow chromosomes.