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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
800-1056
               

               
Cow position:
               
chr3:51609471-51609736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
187, 57
               

               
Conread position:
               
807-1129
               

               
Cow position:
               
chr3:35975446-35975122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 280
               

               
Conread position:
               
812-1222
               

               
Cow position:
               
chr3:15655479-15655065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
822-1214
               

               
Cow position:
               
chr3:75710993-75711379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
823-1317
               

               
Cow position:
               
chr3:37041102-37041591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
824-1344
               

               
Cow position:
               
chr3:53739511-53738979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
826-1325
               

               
Cow position:
               
chr3:70895725-70896225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
827-1008
               

               
Cow position:
               
chr3:16619905-16619728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
827-1086
               

               
Cow position:
               
chr3:83934192-83934457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
828-984
               

               
Cow position:
               
chr3:79094385-79094234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
828-985
               

               
Cow position:
               
chr3:37982439-37982287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
828-1131
               

               
Cow position:
               
chr3:59267764-59268079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
828-1132
               

               
Cow position:
               
chr3:28675670-28675978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
828-1137
               

               
Cow position:
               
chr3:54495744-54496064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
828-1225
               

               
Cow position:
               
chr3:14626469-14626066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
829-1045
               

               
Cow position:
               
chr3:18700517-18700312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
829-1107
               

               
Cow position:
               
chr3:31147324-31147613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
829-1107
               

               
Cow position:
               
chr3:79668961-79669250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
829-1153
               

               
Cow position:
               
chr3:13248170-13247839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
829-1231
               

               
Cow position:
               
chr3:45647817-45648220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
830-984
               

               
Cow position:
               
chr3:3836752-3836598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
830-1165
               

               
Cow position:
               
chr3:42177843-42178180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
831-1049
               

               
Cow position:
               
chr3:51012849-51012622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
831-1130
               

               
Cow position:
               
chr3:64716706-64717014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
831-1131
               

               
Cow position:
               
chr3:24305222-24304925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 90
               

               
Conread position:
               
831-1186
               

               
Cow position:
               
chr3:68291250-68291601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
831-1192
               

               
Cow position:
               
chr3:66610154-66609793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
831-1222
               

               
Cow position:
               
chr3:5101076-5100691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
831-1249
               

               
Cow position:
               
chr3:80071801-80072235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
832-989
               

               
Cow position:
               
chr3:6433979-6434135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 117
               

               
Conread position:
               
832-1051
               

               
Cow position:
               
chr3:62623949-62623739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
832-1084
               

               
Cow position:
               
chr3:66738457-66738717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
832-1116
               

               
Cow position:
               
chr3:49454916-49455213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 266
               

               
Conread position:
               
832-1120
               

               
Cow position:
               
chr3:7858036-7858352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 287
               

               
Conread position:
               
832-1249
               

               
Cow position:
               
chr3:53573066-53572648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 209
               

               
Conread position:
               
832-1335
               

               
Cow position:
               
chr3:30179768-30180275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
833-959
               

               
Cow position:
               
chr3:26832946-26832825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
833-973
               

               
Cow position:
               
chr3:73926479-73926344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
833-1123
               

               
Cow position:
               
chr3:67161617-67161926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
833-1192
               

               
Cow position:
               
chr3:50462028-50462387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
833-1251
               

               
Cow position:
               
chr3:46900880-46901306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
833-1253
               

               
Cow position:
               
chr3:2216044-2216478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
833-1294
               

               
Cow position:
               
chr3:18184754-18185229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1319
               

               
Cow position:
               
chr3:79884800-79884303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
833-1320
               

               
Cow position:
               
chr3:31419382-31419873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
833-1325
               

               
Cow position:
               
chr3:31056316-31055830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
236, 10
               

               
Conread position:
               
833-1325
               

               
Cow position:
               
chr3:48241307-48241789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
833-1336
               

               
Cow position:
               
chr3:18066820-18067324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
834-973
               

               
Cow position:
               
chr3:6402983-6403123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
834-975
               

               
Cow position:
               
chr3:12323754-12323887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
834-985
               

               
Cow position:
               
chr3:51033031-51033179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
834-986
               

               
Cow position:
               
chr3:2334970-2335120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
834-1114
               

               
Cow position:
               
chr3:31501039-31501321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
834-1116
               

               
Cow position:
               
chr3:7408169-7408463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 256
               

               
Conread position:
               
834-1131
               

               
Cow position:
               
chr3:41367297-41366990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
834-1133
               

               
Cow position:
               
chr3:30358948-30358641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
143, 266
               

               
Conread position:
               
834-1246
               

               
Cow position:
               
chr3:59630814-59630408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 248
               

               
Conread position:
               
834-1249
               

               
Cow position:
               
chr3:35299360-35299777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
177, 126
               

               
Conread position:
               
834-1287
               

               
Cow position:
               
chr3:49678808-49679279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 271
               

               
Conread position:
               
834-1325
               

               
Cow position:
               
chr3:49461251-49460743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 389
               

               
Conread position:
               
834-1335
               

               
Cow position:
               
chr3:73961993-73961500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 128
               

               
Conread position:
               
834-1340
               

               
Cow position:
               
chr3:61857182-61857706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 342
               

               
Conread position:
               
834-1342
               

               
Cow position:
               
chr3:72169034-72168534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
835-976
               

               
Cow position:
               
chr3:50099180-50099322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
835-1128
               

               
Cow position:
               
chr3:2903610-2903306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
836-981
               

               
Cow position:
               
chr3:50329387-50329246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
836-1126
               

               
Cow position:
               
chr3:12286924-12287218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
836-1249
               

               
Cow position:
               
chr3:50762807-50763231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
837-1318
               

               
Cow position:
               
chr3:14724986-14725492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
150, 391
               

               
Conread position:
               
837-1344
               

               
Cow position:
               
chr3:55970196-55970720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
839-1067
               

               
Cow position:
               
chr3:15530493-15530715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
199, 61
               

               
Conread position:
               
839-1111
               

               
Cow position:
               
chr3:34525953-34525669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
839-1128
               

               
Cow position:
               
chr3:69962022-69961728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 235
               

               
Conread position:
               
839-1130
               

               
Cow position:
               
chr3:42452201-42452501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 243
               

               
Conread position:
               
839-1264
               

               
Cow position:
               
chr3:82460874-82461298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
839-1338
               

               
Cow position:
               
chr3:68586728-68587214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr3:13350606-13350749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
841-989
               

               
Cow position:
               
chr3:28597176-28597027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
841-990
               

               
Cow position:
               
chr3:28635036-28634888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
841-1045
               

               
Cow position:
               
chr3:11640126-11640337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
841-1077
               

               
Cow position:
               
chr3:23277853-23277605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
841-1095
               

               
Cow position:
               
chr3:34953346-34953598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
841-1095
               

               
Cow position:
               
chr3:40231622-40231873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 155
               

               
Conread position:
               
841-1101
               

               
Cow position:
               
chr3:41947429-41947172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
841-1104
               

               
Cow position:
               
chr3:48566976-48566702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
841-1113
               

               
Cow position:
               
chr3:4223008-4223288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
841-1115
               

               
Cow position:
               
chr3:18763586-18763870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 238
               

               
Conread position:
               
841-1128
               

               
Cow position:
               
chr3:68509336-68509041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
132, 259
               

               
Conread position:
               
841-1131
               

               
Cow position:
               
chr3:27285918-27286219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
144, 246
               

               
Conread position:
               
841-1133
               

               
Cow position:
               
chr3:13118040-13118332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
841-1150
               

               
Cow position:
               
chr3:69849809-69849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 168
               

               
Conread position:
               
841-1172
               

               
Cow position:
               
chr3:33698414-33698762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
146, 267
               

               
Conread position:
               
841-1173
               

               
Cow position:
               
chr3:13513045-13512718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
7, 164
               

               
Conread position:
               
841-1192
               

               
Cow position:
               
chr3:65800288-65800636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
841-1216
               

               
Cow position:
               
chr3:58969200-58968828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
841-1226
               

               
Cow position:
               
chr3:66292481-66292091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
841-1236
               

               
Cow position:
               
chr3:69751008-69750617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 174
               

               
Conread position:
               
841-1288
               

               
Cow position:
               
chr3:72390776-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
841-1299
               

               
Cow position:
               
chr3:59001052-59000606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
841-1319
               

               
Cow position:
               
chr3:59596897-59597353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 81
               

               
Conread position:
               
841-1321
               

               
Cow position:
               
chr3:39066026-39066508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
127, 196
               

               
Conread position:
               
841-1328
               

               
Cow position:
               
chr3:54782318-54781806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
841-1334
               

               
Cow position:
               
chr3:70675910-70676422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 246
               

               
Conread position:
               
842-964
               

               
Cow position:
               
chr3:26981045-26981168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr3:24823668-24823805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr3:40630059-40629923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr3:28357905-28357766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr3:29172077-29172212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr3:66014099-66014239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr3:13361309-13361449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr3:20476361-20476501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr3:27242825-27242687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr3:52147982-52147844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr3:58060923-58060781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:3884332-3884188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:6265201-6265344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:18887273-18887418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:24639284-24639424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:36672311-36672166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:41053508-41053646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:71488625-71488483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr3:83728176-83728038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
842-986
               

               
Cow position:
               
chr3:52486976-52487116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr3:18179444-18179591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr3:59344938-59345088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
842-995
               

               
Cow position:
               
chr3:17331462-17331615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-996
               

               
Cow position:
               
chr3:69766542-69766390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr3:72174153-72173990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
842-1026
               

               
Cow position:
               
chr3:68514855-68514674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-1031
               

               
Cow position:
               
chr3:48900808-48900613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
842-1035
               

               
Cow position:
               
chr3:75143338-75143137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
842-1036
               

               
Cow position:
               
chr3:14280538-14280742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
842-1041
               

               
Cow position:
               
chr3:6799308-6799111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
842-1043
               

               
Cow position:
               
chr3:23417171-23416967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
842-1045
               

               
Cow position:
               
chr3:8557087-8556881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
842-1047
               

               
Cow position:
               
chr3:82618085-82618292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
842-1050
               

               
Cow position:
               
chr3:14717508-14717719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1050
               

               
Cow position:
               
chr3:65020026-65020247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
842-1054
               

               
Cow position:
               
chr3:580042-580249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
208, 152
               

               
Conread position:
               
842-1059
               

               
Cow position:
               
chr3:36657076-36656851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
842-1063
               

               
Cow position:
               
chr3:16004292-16004066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 113
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr3:54808853-54809088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
842-1080
               

               
Cow position:
               
chr3:2007968-2008201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
842-1080
               

               
Cow position:
               
chr3:58951315-58951556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 178
               

               
Conread position:
               
842-1081
               

               
Cow position:
               
chr3:22872358-22872104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
842-1081
               

               
Cow position:
               
chr3:48811291-48811051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
166, 70
               

               
Conread position:
               
842-1084
               

               
Cow position:
               
chr3:36174382-36174124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
842-1085
               

               
Cow position:
               
chr3:30531648-30531906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
842-1087
               

               
Cow position:
               
chr3:522419-522654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr3:20746885-20746636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 118
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr3:73762764-73762515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
130, 142
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr3:5064787-5065043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 238
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr3:14864734-14864991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr3:38870428-38870682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 236
               

               
Conread position:
               
842-1089
               

               
Cow position:
               
chr3:40827548-40827806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
143, 209
               

               
Conread position:
               
842-1094
               

               
Cow position:
               
chr3:8159649-8159909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr3:11385367-11385632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 240
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr3:68878016-68877753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr3:8753158-8753417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr3:80793589-80793324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
842-1103
               

               
Cow position:
               
chr3:13517461-13517197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr3:31517065-31516808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr3:45214942-45214675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
140, 246
               

               
Conread position:
               
842-1106
               

               
Cow position:
               
chr3:61678385-61678660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 263
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:5495803-5495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
42, 252
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:11728388-11728111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:52225282-52225559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:54653297-54653018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:69945245-69944966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 241
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr3:73393585-73393315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
842-1117
               

               
Cow position:
               
chr3:17952349-17952634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 256
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr3:77496511-77496814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
842-1127
               

               
Cow position:
               
chr3:83761459-83761169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 253
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr3:35919422-35919706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
170, 141
               

               
Conread position:
               
842-1129
               

               
Cow position:
               
chr3:65273705-65273407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr3:78782668-78782947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
842-1132
               

               
Cow position:
               
chr3:78200961-78201259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 242
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr3:15687827-15687524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr3:22490484-22490790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
142, 261
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr3:28434714-28434407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr3:75265079-75264772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 212
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr3:84598359-84598065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
160, 141
               

               
Conread position:
               
842-1139
               

               
Cow position:
               
chr3:45312746-45313048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
842-1149
               

               
Cow position:
               
chr3:50922260-50922584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1151
               

               
Cow position:
               
chr3:11026620-11026930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
145, 109
               

               
Conread position:
               
842-1162
               

               
Cow position:
               
chr3:39328106-39328421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
842-1172
               

               
Cow position:
               
chr3:29807157-29807494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
842-1173
               

               
Cow position:
               
chr3:21341269-21340927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
842-1174
               

               
Cow position:
               
chr3:5851233-5850896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
842-1177
               

               
Cow position:
               
chr3:43528543-43528196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 116
               

               
Conread position:
               
842-1181
               

               
Cow position:
               
chr3:12255174-12255519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
842-1181
               

               
Cow position:
               
chr3:58206757-58206409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
842-1184
               

               
Cow position:
               
chr3:46350346-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
16, 329
               

               
Conread position:
               
842-1186
               

               
Cow position:
               
chr3:31047248-31046907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
842-1192
               

               
Cow position:
               
chr3:27289631-27289991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 193
               

               
Conread position:
               
842-1200
               

               
Cow position:
               
chr3:75727895-75727523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 260
               

               
Conread position:
               
842-1201
               

               
Cow position:
               
chr3:3954189-3954555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 258
               

               
Conread position:
               
842-1203
               

               
Cow position:
               
chr3:15685216-15684860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
842-1204
               

               
Cow position:
               
chr3:62542008-62542375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 226
               

               
Conread position:
               
842-1216
               

               
Cow position:
               
chr3:26920589-26920985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr3:72675781-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 251
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr3:79292529-79292908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
842-1222
               

               
Cow position:
               
chr3:35852775-35852390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr3:59798948-59799331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr3:77224808-77225204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr3:38346897-38347275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr3:53112862-53113260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 377
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr3:59101529-59101912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 305
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr3:42423637-42423234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 288
               

               
Conread position:
               
842-1239
               

               
Cow position:
               
chr3:59588213-59588608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 255
               

               
Conread position:
               
842-1241
               

               
Cow position:
               
chr3:55272346-55271947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
842-1244
               

               
Cow position:
               
chr3:12712229-12711814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 401
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr3:80053840-80053441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 107
               

               
Conread position:
               
842-1247
               

               
Cow position:
               
chr3:49650074-49650491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr3:26973773-26973335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 234
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr3:49382646-49383053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 201
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr3:24852893-24852491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 285
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr3:31206566-31206980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 236
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr3:59691598-59691996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
117, 136
               

               
Conread position:
               
842-1277
               

               
Cow position:
               
chr3:70566044-70565599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 254
               

               
Conread position:
               
842-1287
               

               
Cow position:
               
chr3:29891723-29891261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
842-1299
               

               
Cow position:
               
chr3:57754786-57754318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
842-1302
               

               
Cow position:
               
chr3:53150020-53150493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr3:2035992-2036465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 244
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr3:57577393-57577857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr3:60597247-60597698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
842-1311
               

               
Cow position:
               
chr3:24549138-24548666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 152
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr3:48362777-48363244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 82
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr3:68303022-68303493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 139
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr3:72776934-72777408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 185
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr3:35884259-35883756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 98
               

               
Conread position:
               
842-1318
               

               
Cow position:
               
chr3:71231100-71231574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 116
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr3:2506785-2506299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr3:5365379-5365842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr3:45881603-45882076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 206
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr3:65968849-65969351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr3:83442185-83441716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
842-1320
               

               
Cow position:
               
chr3:20129635-20130115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 263
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr3:18459826-18459358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 246
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr3:53790850-53790363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr3:20663844-20663357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 263
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr3:83474443-83474942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
842-1330
               

               
Cow position:
               
chr3:13899759-13899266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 266
               

               
Conread position:
               
842-1331
               

               
Cow position:
               
chr3:14466010-14465526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
842-1331
               

               
Cow position:
               
chr3:23169376-23168876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 300
               

               
Conread position:
               
842-1331
               

               
Cow position:
               
chr3:80973047-80973542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 195
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr3:210016-210511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr3:18393690-18393210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 117
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr3:49119338-49118843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 253
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr3:19711621-19711143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 86
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr3:27274233-27274720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr3:65058396-65058892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr3:76172968-76172492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
842-1338
               

               
Cow position:
               
chr3:16547370-16547864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 191
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr3:4461795-4461294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 290
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr3:27553245-27553727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr3:2397089-2396589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 252
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr3:50768373-50768877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:2674723-2675234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 253
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:21302737-21302237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:26903811-26904300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:67929572-67929057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 78
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:71497452-71496927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr3:79902197-79902699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 262
               

               
Conread position:
               
843-974
               

               
Cow position:
               
chr3:76155409-76155537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
843-985
               

               
Cow position:
               
chr3:40100977-40100838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
843-1045
               

               
Cow position:
               
chr3:77276709-77276503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
843-1095
               

               
Cow position:
               
chr3:22021279-22021018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 178
               

               
Conread position:
               
843-1131
               

               
Cow position:
               
chr3:77227013-77227315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
843-1153
               

               
Cow position:
               
chr3:49218613-49218302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
843-1222
               

               
Cow position:
               
chr3:54340722-54340341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 199
               

               
Conread position:
               
843-1249
               

               
Cow position:
               
chr3:48296406-48296806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
843-1325
               

               
Cow position:
               
chr3:15786257-15786751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 239
               

               
Conread position:
               
844-985
               

               
Cow position:
               
chr3:76614338-76614471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
844-1085
               

               
Cow position:
               
chr3:33633191-33632946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
844-1091
               

               
Cow position:
               
chr3:76188387-76188638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
844-1163
               

               
Cow position:
               
chr3:45523960-45524289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 239
               

               
Conread position:
               
844-1217
               

               
Cow position:
               
chr3:79592193-79591816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 246
               

               
Conread position:
               
844-1240
               

               
Cow position:
               
chr3:29887729-29887321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 107
               

               
Conread position:
               
844-1299
               

               
Cow position:
               
chr3:53593004-53592529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
844-1325
               

               
Cow position:
               
chr3:25690484-25690982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
844-1337
               

               
Cow position:
               
chr3:61539492-61539993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 329
               

               
Conread position:
               
845-964
               

               
Cow position:
               
chr3:63688065-63687947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr3:11447698-11447834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
845-1004
               

               
Cow position:
               
chr3:9663490-9663337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
845-1008
               

               
Cow position:
               
chr3:2431146-2430986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
845-1081
               

               
Cow position:
               
chr3:66978540-66978778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 165
               

               
Conread position:
               
845-1083
               

               
Cow position:
               
chr3:15081042-15080802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
132, 178
               

               
Conread position:
               
845-1085
               

               
Cow position:
               
chr3:48370828-48371082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
845-1093
               

               
Cow position:
               
chr3:11333617-11333358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
845-1107
               

               
Cow position:
               
chr3:19198378-19198635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
845-1111
               

               
Cow position:
               
chr3:61191220-61190954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
845-1130
               

               
Cow position:
               
chr3:4332055-4332354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 235
               

               
Conread position:
               
845-1130
               

               
Cow position:
               
chr3:8147966-8147678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
845-1134
               

               
Cow position:
               
chr3:49230712-49231010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
845-1139
               

               
Cow position:
               
chr3:48269560-48269863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
845-1174
               

               
Cow position:
               
chr3:61171805-61171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
845-1178
               

               
Cow position:
               
chr3:31771397-31771721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
845-1192
               

               
Cow position:
               
chr3:51604910-51604564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 207
               

               
Conread position:
               
845-1193
               

               
Cow position:
               
chr3:4457379-4457019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
137, 189
               

               
Conread position:
               
845-1236
               

               
Cow position:
               
chr3:26219364-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
845-1241
               

               
Cow position:
               
chr3:59451292-59451702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
845-1251
               

               
Cow position:
               
chr3:70401600-70402004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
845-1252
               

               
Cow position:
               
chr3:81371353-81371760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 130
               

               
Conread position:
               
845-1261
               

               
Cow position:
               
chr3:49327643-49328062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
845-1303
               

               
Cow position:
               
chr3:62999304-62998834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
845-1317
               

               
Cow position:
               
chr3:53221716-53222187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
845-1325
               

               
Cow position:
               
chr3:11254455-11253982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
845-1327
               

               
Cow position:
               
chr3:14552575-14553057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 244
               

               
Conread position:
               
845-1332
               

               
Cow position:
               
chr3:16752550-16752064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
845-1333
               

               
Cow position:
               
chr3:68647857-68648369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 257
               

               
Conread position:
               
845-1335
               

               
Cow position:
               
chr3:53909811-53910299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
845-1335
               

               
Cow position:
               
chr3:71246732-71247207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
845-1340
               

               
Cow position:
               
chr3:61225038-61224550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
845-1342
               

               
Cow position:
               
chr3:53384586-53384080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 187
               

               
Conread position:
               
845-1344
               

               
Cow position:
               
chr3:2518840-2518341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 268
               

               
Conread position:
               
846-1221
               

               
Cow position:
               
chr3:53588694-53588304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
846-1235
               

               
Cow position:
               
chr3:37599718-37599334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 112
               

               
Conread position:
               
846-1319
               

               
Cow position:
               
chr3:13353058-13353541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
846-1327
               

               
Cow position:
               
chr3:30463468-30462991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 174
               

               
Conread position:
               
847-982
               

               
Cow position:
               
chr3:5950731-5950596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-984
               

               
Cow position:
               
chr3:83988180-83988312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr3:42671020-42671157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
847-999
               

               
Cow position:
               
chr3:57022274-57022428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
847-1031
               

               
Cow position:
               
chr3:76091984-76092163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
847-1032
               

               
Cow position:
               
chr3:22908135-22907940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
847-1041
               

               
Cow position:
               
chr3:62611610-62611806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
847-1062
               

               
Cow position:
               
chr3:9116606-9116819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
847-1062
               

               
Cow position:
               
chr3:53903885-53904102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
847-1075
               

               
Cow position:
               
chr3:26894367-26894597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
847-1076
               

               
Cow position:
               
chr3:83920897-83921134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 206
               

               
Conread position:
               
847-1080
               

               
Cow position:
               
chr3:2483152-2483388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 112
               

               
Conread position:
               
847-1083
               

               
Cow position:
               
chr3:6853807-6853560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
847-1088
               

               
Cow position:
               
chr3:16157381-16157631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
847-1107
               

               
Cow position:
               
chr3:31037291-31037031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
847-1109
               

               
Cow position:
               
chr3:15662002-15661725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
847-1130
               

               
Cow position:
               
chr3:54959890-54960179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
847-1131
               

               
Cow position:
               
chr3:3164797-3164505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
132, 237
               

               
Conread position:
               
847-1132
               

               
Cow position:
               
chr3:81939950-81940249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
138, 262
               

               
Conread position:
               
847-1137
               

               
Cow position:
               
chr3:1133396-1133081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 98
               

               
Conread position:
               
847-1137
               

               
Cow position:
               
chr3:45986228-45986522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 136
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr3:59514810-59515103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
132, 119
               

               
Conread position:
               
847-1140
               

               
Cow position:
               
chr3:64294375-64294673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 184
               

               
Conread position:
               
847-1188
               

               
Cow position:
               
chr3:4663050-4663387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 38
               

               
Conread position:
               
847-1203
               

               
Cow position:
               
chr3:78530238-78530604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
847-1222
               

               
Cow position:
               
chr3:66708376-66707986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 352
               

               
Conread position:
               
847-1231
               

               
Cow position:
               
chr3:37186537-37186916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
847-1231
               

               
Cow position:
               
chr3:62826924-62826530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 242
               

               
Conread position:
               
847-1236
               

               
Cow position:
               
chr3:34270630-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr3:14263091-14263502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 289
               

               
Conread position:
               
847-1249
               

               
Cow position:
               
chr3:81471401-81470990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
847-1279
               

               
Cow position:
               
chr3:6689690-6690140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 247
               

               
Conread position:
               
847-1281
               

               
Cow position:
               
chr3:2630497-2630902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
847-1294
               

               
Cow position:
               
chr3:55117273-55116825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
847-1312
               

               
Cow position:
               
chr3:22676383-22675937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
847-1315
               

               
Cow position:
               
chr3:2537953-2538410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
847-1317
               

               
Cow position:
               
chr3:20997276-20996827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
160, 5
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr3:56582542-56583025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 111
               

               
Conread position:
               
847-1320
               

               
Cow position:
               
chr3:7338082-7337608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
847-1320
               

               
Cow position:
               
chr3:17695307-17694824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 204
               

               
Conread position:
               
847-1320
               

               
Cow position:
               
chr3:45184146-45183643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
847-1325
               

               
Cow position:
               
chr3:48852267-48851784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
847-1326
               

               
Cow position:
               
chr3:78076888-78077375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 201
               

               
Conread position:
               
847-1328
               

               
Cow position:
               
chr3:82020150-82019653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 213
               

               
Conread position:
               
847-1330
               

               
Cow position:
               
chr3:7763362-7763845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 184
               

               
Conread position:
               
847-1337
               

               
Cow position:
               
chr3:3032097-3032605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
847-1342
               

               
Cow position:
               
chr3:31298461-31297959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
112, 119
               

               
Conread position:
               
847-1343
               

               
Cow position:
               
chr3:53429192-53428717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
847-1344
               

               
Cow position:
               
chr3:17710036-17710544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
130, 251
               

               
Conread position:
               
848-985
               

               
Cow position:
               
chr3:59179108-59179242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
848-1088
               

               
Cow position:
               
chr3:58286198-58285949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
848-1089
               

               
Cow position:
               
chr3:58158764-58158520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
848-1091
               

               
Cow position:
               
chr3:42461400-42461649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
848-1094
               

               
Cow position:
               
chr3:82657385-82657129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
110, 159
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr3:2594824-2595091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 250
               

               
Conread position:
               
848-1130
               

               
Cow position:
               
chr3:80082117-80081824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
848-1131
               

               
Cow position:
               
chr3:59271259-59271533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
848-1156
               

               
Cow position:
               
chr3:3553248-3553547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
207, 135
               

               
Conread position:
               
848-1162
               

               
Cow position:
               
chr3:48530338-48530654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
848-1197
               

               
Cow position:
               
chr3:72018823-72019172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
848-1201
               

               
Cow position:
               
chr3:24939525-24939165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
848-1221
               

               
Cow position:
               
chr3:61839991-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 21
               

               
Conread position:
               
848-1222
               

               
Cow position:
               
chr3:59608207-59608583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
848-1241
               

               
Cow position:
               
chr3:58766989-58767361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 39
               

               
Conread position:
               
848-1270
               

               
Cow position:
               
chr3:73708756-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
848-1276
               

               
Cow position:
               
chr3:51146968-51146538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 285
               

               
Conread position:
               
848-1279
               

               
Cow position:
               
chr3:64011119-64010673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
848-1289
               

               
Cow position:
               
chr3:55010455-55010024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
848-1303
               

               
Cow position:
               
chr3:7566719-7566260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 200
               

               
Conread position:
               
848-1312
               

               
Cow position:
               
chr3:7678373-7678835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
848-1326
               

               
Cow position:
               
chr3:59611016-59610535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
848-1327
               

               
Cow position:
               
chr3:10958528-10958059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 47
               

               
Conread position:
               
848-1328
               

               
Cow position:
               
chr3:75479714-75480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 21
               

               
Conread position:
               
848-1333
               

               
Cow position:
               
chr3:45700534-45700993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
848-1335
               

               
Cow position:
               
chr3:48252597-48253072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
848-1335
               

               
Cow position:
               
chr3:77188146-77188630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
848-1339
               

               
Cow position:
               
chr3:15955244-15955721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
848-1339
               

               
Cow position:
               
chr3:53270526-53271032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 255
               

               
Conread position:
               
848-1340
               

               
Cow position:
               
chr3:23735403-23734887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
848-1341
               

               
Cow position:
               
chr3:2024884-2025402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 367
               

               
Conread position:
               
848-1341
               

               
Cow position:
               
chr3:31225147-31225624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
848-1342
               

               
Cow position:
               
chr3:55190050-55189552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
848-1342
               

               
Cow position:
               
chr3:59604571-59605043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 50
               

               
Conread position:
               
848-1343
               

               
Cow position:
               
chr3:72473607-72474121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 259
               

               
Conread position:
               
848-1344
               

               
Cow position:
               
chr3:46161145-46160653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 184
               

               
Conread position:
               
849-1096
               

               
Cow position:
               
chr3:20772559-20772813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
849-1267
               

               
Cow position:
               
chr3:79220550-79220986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 258
               

               
Conread position:
               
849-1287
               

               
Cow position:
               
chr3:74600818-74601257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
849-1327
               

               
Cow position:
               
chr3:20802930-20802455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
849-1343
               

               
Cow position:
               
chr3:1830864-1830374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
850-1105
               

               
Cow position:
               
chr3:11019820-11020090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
850-1130
               

               
Cow position:
               
chr3:57554145-57553859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
850-1344
               

               
Cow position:
               
chr3:15954375-15953882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 136
               

               
Conread position:
               
851-1219
               

               
Cow position:
               
chr3:8752502-8752864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 35
               

               
Conread position:
               
851-1219
               

               
Cow position:
               
chr3:22089579-22089201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 88
               

               
Conread position:
               
851-1311
               

               
Cow position:
               
chr3:17222439-17221964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 6
               

               
Conread position:
               
851-1321
               

               
Cow position:
               
chr3:8393049-8393518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 241
               

               
Conread position:
               
851-1325
               

               
Cow position:
               
chr3:80740281-80740736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
851-1331
               

               
Cow position:
               
chr3:46341166-46341674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
852-1085
               

               
Cow position:
               
chr3:66116407-66116165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
852-1090
               

               
Cow position:
               
chr3:25691452-25691706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
852-1130
               

               
Cow position:
               
chr3:70333769-70333492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
852-1203
               

               
Cow position:
               
chr3:37451772-37452130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
852-1221
               

               
Cow position:
               
chr3:27532959-27532575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
5, 293
               

               
Conread position:
               
852-1224
               

               
Cow position:
               
chr3:36100531-36100917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 309
               

               
Conread position:
               
852-1313
               

               
Cow position:
               
chr3:74533051-74533505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 204
               

               
Conread position:
               
853-1344
               

               
Cow position:
               
chr3:8591638-8591166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
854-1071
               

               
Cow position:
               
chr3:79148570-79148337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
854-1155
               

               
Cow position:
               
chr3:49793121-49793411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
854-1292
               

               
Cow position:
               
chr3:71161502-71161940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
854-1313
               

               
Cow position:
               
chr3:72121-72591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 252
               

               
Conread position:
               
856-1038
               

               
Cow position:
               
chr3:12670985-12670799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
856-1130
               

               
Cow position:
               
chr3:5899533-5899814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
856-1243
               

               
Cow position:
               
chr3:66375028-66375421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
856-1247
               

               
Cow position:
               
chr3:67704248-67704652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
856-1344
               

               
Cow position:
               
chr3:59392399-59391923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
857-1226
               

               
Cow position:
               
chr3:83816084-83815703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 157
               

               
Conread position:
               
857-1249
               

               
Cow position:
               
chr3:17935214-17934829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 104
               

               
Conread position:
               
857-1249
               

               
Cow position:
               
chr3:50069489-50069869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
857-1270
               

               
Cow position:
               
chr3:28898513-28898091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
857-1327
               

               
Cow position:
               
chr3:23876707-23877182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 240
               

               
Conread position:
               
857-1343
               

               
Cow position:
               
chr3:60933123-60933616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 197
               

               
Conread position:
               
859-985
               

               
Cow position:
               
chr3:53508091-53508214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
859-1080
               

               
Cow position:
               
chr3:24276418-24276638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
859-1089
               

               
Cow position:
               
chr3:32869860-32870098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
859-1089
               

               
Cow position:
               
chr3:38497663-38497894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
859-1090
               

               
Cow position:
               
chr3:73956737-73956979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
859-1093
               

               
Cow position:
               
chr3:23944808-23945052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 153
               

               
Conread position:
               
859-1094
               

               
Cow position:
               
chr3:45744424-45744657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
168, 117
               

               
Conread position:
               
859-1095
               

               
Cow position:
               
chr3:63203156-63203384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 99
               

               
Conread position:
               
859-1129
               

               
Cow position:
               
chr3:78894603-78894337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
859-1132
               

               
Cow position:
               
chr3:27544618-27544343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
859-1156
               

               
Cow position:
               
chr3:9843295-9843604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
859-1186
               

               
Cow position:
               
chr3:58130711-58131040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
859-1192
               

               
Cow position:
               
chr3:74699684-74699332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
859-1215
               

               
Cow position:
               
chr3:44861597-44861238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 209
               

               
Conread position:
               
859-1219
               

               
Cow position:
               
chr3:51255495-51255857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
65, 252
               

               
Conread position:
               
859-1224
               

               
Cow position:
               
chr3:5096914-5097290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 244
               

               
Conread position:
               
859-1231
               

               
Cow position:
               
chr3:19006378-19006747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 190
               

               
Conread position:
               
859-1231
               

               
Cow position:
               
chr3:55085473-55085080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
105, 368
               

               
Conread position:
               
859-1246
               

               
Cow position:
               
chr3:45534588-45534194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr3:63179579-63179960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
116, 125
               

               
Conread position:
               
859-1251
               

               
Cow position:
               
chr3:80581382-80581763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
859-1286
               

               
Cow position:
               
chr3:54740160-54739751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
859-1292
               

               
Cow position:
               
chr3:65413564-65413124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
859-1312
               

               
Cow position:
               
chr3:45647388-45647836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
859-1317
               

               
Cow position:
               
chr3:15158752-15159204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 226
               

               
Conread position:
               
859-1317
               

               
Cow position:
               
chr3:17937128-17936672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 193
               

               
Conread position:
               
859-1318
               

               
Cow position:
               
chr3:9641275-9641731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 98
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr3:3985041-3985494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 235
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr3:13330061-13329616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr3:17957178-17957638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
859-1320
               

               
Cow position:
               
chr3:29360424-29359986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
859-1327
               

               
Cow position:
               
chr3:78946128-78945636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
859-1332
               

               
Cow position:
               
chr3:68881398-68880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
859-1334
               

               
Cow position:
               
chr3:23471757-23471271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 193
               

               
Conread position:
               
859-1335
               

               
Cow position:
               
chr3:29812955-29813418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
859-1336
               

               
Cow position:
               
chr3:15229108-15228645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 109
               

               
Conread position:
               
859-1343
               

               
Cow position:
               
chr3:54050308-54049828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
860-1033
               

               
Cow position:
               
chr3:49388554-49388733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
860-1056
               

               
Cow position:
               
chr3:18854805-18855010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 94
               

               
Conread position:
               
860-1067
               

               
Cow position:
               
chr3:56704825-56704616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
860-1084
               

               
Cow position:
               
chr3:70468091-70467880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
860-1085
               

               
Cow position:
               
chr3:42914165-42914389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
186, 65
               

               
Conread position:
               
860-1095
               

               
Cow position:
               
chr3:65581304-65581058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
860-1114
               

               
Cow position:
               
chr3:80202319-80202578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 185
               

               
Conread position:
               
860-1115
               

               
Cow position:
               
chr3:34316252-34315980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
860-1186
               

               
Cow position:
               
chr3:15057886-15057575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
860-1186
               

               
Cow position:
               
chr3:73759807-73759472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
860-1221
               

               
Cow position:
               
chr3:23111792-23111433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
860-1232
               

               
Cow position:
               
chr3:48629874-48629499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
860-1249
               

               
Cow position:
               
chr3:56059519-56059917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 379
               

               
Conread position:
               
860-1279
               

               
Cow position:
               
chr3:14602001-14601566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
860-1319
               

               
Cow position:
               
chr3:54434686-54435145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
860-1320
               

               
Cow position:
               
chr3:2393254-2392791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 242
               

               
Conread position:
               
860-1325
               

               
Cow position:
               
chr3:39970160-39969680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 385
               

               
Conread position:
               
860-1330
               

               
Cow position:
               
chr3:64281224-64280750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 239
               

               
Conread position:
               
860-1342
               

               
Cow position:
               
chr3:68146109-68145653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
860-1343
               

               
Cow position:
               
chr3:66885326-66884827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 191
               

               
Conread position:
               
861-985
               

               
Cow position:
               
chr3:33693362-33693486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
861-1022
               

               
Cow position:
               
chr3:8901134-8901300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
861-1035
               

               
Cow position:
               
chr3:61262516-61262696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 171
               

               
Conread position:
               
861-1133
               

               
Cow position:
               
chr3:30417842-30418128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
861-1203
               

               
Cow position:
               
chr3:58174624-58174966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
861-1226
               

               
Cow position:
               
chr3:17895567-17895933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
861-1227
               

               
Cow position:
               
chr3:28908482-28908117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
861-1236
               

               
Cow position:
               
chr3:4049926-4050286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
861-1248
               

               
Cow position:
               
chr3:73443374-73442991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 213
               

               
Conread position:
               
861-1317
               

               
Cow position:
               
chr3:23408629-23408189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
861-1327
               

               
Cow position:
               
chr3:22221069-22221511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 23
               

               
Conread position:
               
861-1343
               

               
Cow position:
               
chr3:65236738-65237222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
862-1095
               

               
Cow position:
               
chr3:83369036-83369270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
863-1120
               

               
Cow position:
               
chr3:57789363-57789612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
863-1130
               

               
Cow position:
               
chr3:19789404-19789125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 226
               

               
Conread position:
               
863-1202
               

               
Cow position:
               
chr3:12675324-12674982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 231
               

               
Conread position:
               
863-1248
               

               
Cow position:
               
chr3:61278621-61279013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 235
               

               
Conread position:
               
864-985
               

               
Cow position:
               
chr3:23678673-23678553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
864-1069
               

               
Cow position:
               
chr3:58383684-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
864-1137
               

               
Cow position:
               
chr3:84000327-84000609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 229
               

               
Conread position:
               
864-1221
               

               
Cow position:
               
chr3:76387896-76387529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
864-1238
               

               
Cow position:
               
chr3:3738207-3738576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
865-1281
               

               
Cow position:
               
chr3:26682076-26681675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
866-1224
               

               
Cow position:
               
chr3:8457375-8457737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
869-981
               

               
Cow position:
               
chr3:34115025-34114915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
869-981
               

               
Cow position:
               
chr3:75164189-75164082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
869-1222
               

               
Cow position:
               
chr3:5374056-5374409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
869-1305
               

               
Cow position:
               
chr3:70334982-70334529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
869-1331
               

               
Cow position:
               
chr3:32584879-32585342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 210
               

               
Conread position:
               
869-1340
               

               
Cow position:
               
chr3:74233921-74234381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
870-984
               

               
Cow position:
               
chr3:69144538-69144424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr3:59040165-59040279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
870-1004
               

               
Cow position:
               
chr3:5416509-5416376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
870-1044
               

               
Cow position:
               
chr3:18607090-18607275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
870-1053
               

               
Cow position:
               
chr3:34392374-34392183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
870-1080
               

               
Cow position:
               
chr3:42588071-42588298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
870-1084
               

               
Cow position:
               
chr3:23477957-23478172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
870-1096
               

               
Cow position:
               
chr3:20155552-20155788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
870-1129
               

               
Cow position:
               
chr3:49731915-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
870-1130
               

               
Cow position:
               
chr3:42483622-42483897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
870-1131
               

               
Cow position:
               
chr3:63861179-63860899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
870-1134
               

               
Cow position:
               
chr3:22170911-22171184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
870-1164
               

               
Cow position:
               
chr3:81277982-81277675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 231
               

               
Conread position:
               
870-1169
               

               
Cow position:
               
chr3:60892355-60892653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
870-1186
               

               
Cow position:
               
chr3:39171762-39171441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 268
               

               
Conread position:
               
870-1192
               

               
Cow position:
               
chr3:68583280-68582948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
870-1204
               

               
Cow position:
               
chr3:20437923-20437593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
870-1221
               

               
Cow position:
               
chr3:4031690-4032043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
870-1225
               

               
Cow position:
               
chr3:64172167-64172524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
870-1235
               

               
Cow position:
               
chr3:67744906-67744534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 179
               

               
Conread position:
               
870-1238
               

               
Cow position:
               
chr3:59208536-59208889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
89, 219
               

               
Conread position:
               
870-1244
               

               
Cow position:
               
chr3:23496834-23496475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
870-1254
               

               
Cow position:
               
chr3:82056395-82056008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
870-1289
               

               
Cow position:
               
chr3:44101703-44102114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
870-1289
               

               
Cow position:
               
chr3:77365572-77365140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
870-1292
               

               
Cow position:
               
chr3:18497747-18498168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
870-1298
               

               
Cow position:
               
chr3:68627953-68627531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
870-1303
               

               
Cow position:
               
chr3:53046935-53046497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 188
               

               
Conread position:
               
870-1303
               

               
Cow position:
               
chr3:66901020-66900566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 449
               

               
Conread position:
               
870-1317
               

               
Cow position:
               
chr3:75570719-75570271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
870-1318
               

               
Cow position:
               
chr3:36570328-36569862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
870-1326
               

               
Cow position:
               
chr3:73467341-73467811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr3:17456547-17456082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 216
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr3:57763945-57764399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 218
               

               
Conread position:
               
870-1330
               

               
Cow position:
               
chr3:15387933-15388408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 208
               

               
Conread position:
               
870-1330
               

               
Cow position:
               
chr3:26065723-26066177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 228
               

               
Conread position:
               
870-1333
               

               
Cow position:
               
chr3:55124556-55124093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
870-1334
               

               
Cow position:
               
chr3:49482982-49482524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
870-1344
               

               
Cow position:
               
chr3:78443841-78443371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 216
               

               
Conread position:
               
870-1344
               

               
Cow position:
               
chr3:80564685-80565164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
871-1129
               

               
Cow position:
               
chr3:30701045-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
871-1134
               

               
Cow position:
               
chr3:74409218-74409478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
871-1169
               

               
Cow position:
               
chr3:75057391-75057106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
871-1322
               

               
Cow position:
               
chr3:76138212-76138640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
871-1332
               

               
Cow position:
               
chr3:68708278-68707836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
872-984
               

               
Cow position:
               
chr3:16890458-16890568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
872-985
               

               
Cow position:
               
chr3:48923789-48923677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
872-1063
               

               
Cow position:
               
chr3:53222918-53222717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
872-1128
               

               
Cow position:
               
chr3:47284562-47284823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
872-1146
               

               
Cow position:
               
chr3:32399531-32399250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 209
               

               
Conread position:
               
872-1236
               

               
Cow position:
               
chr3:6873521-6873157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
872-1243
               

               
Cow position:
               
chr3:38691681-38691308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
872-1249
               

               
Cow position:
               
chr3:13507190-13507578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
872-1312
               

               
Cow position:
               
chr3:74499948-74500427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
115, 359
               

               
Conread position:
               
872-1327
               

               
Cow position:
               
chr3:73764469-73764030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
872-1337
               

               
Cow position:
               
chr3:38863837-38864317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 374
               

               
Conread position:
               
873-1317
               

               
Cow position:
               
chr3:7331394-7330963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
873-1331
               

               
Cow position:
               
chr3:75050895-75050437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
873-1332
               

               
Cow position:
               
chr3:15052212-15051762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
873-1340
               

               
Cow position:
               
chr3:61169508-61170010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 310
               

               
Conread position:
               
874-1183
               

               
Cow position:
               
chr3:35702612-35702924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
874-1326
               

               
Cow position:
               
chr3:74088447-74087994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
874-1341
               

               
Cow position:
               
chr3:54945851-54946318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
875-1074
               

               
Cow position:
               
chr3:79208276-79208063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
875-1222
               

               
Cow position:
               
chr3:525081-525427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
875-1227
               

               
Cow position:
               
chr3:10347081-10347441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 226
               

               
Conread position:
               
875-1332
               

               
Cow position:
               
chr3:31309628-31309164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 221
               

               
Conread position:
               
876-1008
               

               
Cow position:
               
chr3:31276376-31276245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
876-1279
               

               
Cow position:
               
chr3:77271540-77271141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
876-1344
               

               
Cow position:
               
chr3:51578593-51578122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 135
               

               
Conread position:
               
877-1221
               

               
Cow position:
               
chr3:74611291-74611643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
43, 231
               

               
Conread position:
               
878-999
               

               
Cow position:
               
chr3:9638863-9638736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
878-1120
               

               
Cow position:
               
chr3:35283367-35283110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
878-1245
               

               
Cow position:
               
chr3:57624193-57624566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
878-1249
               

               
Cow position:
               
chr3:70899630-70899996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 107
               

               
Conread position:
               
878-1288
               

               
Cow position:
               
chr3:45279187-45279615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
879-1138
               

               
Cow position:
               
chr3:17451203-17450942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 148
               

               
Conread position:
               
879-1190
               

               
Cow position:
               
chr3:14633255-14632934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
879-1320
               

               
Cow position:
               
chr3:29596124-29596573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
880-1295
               

               
Cow position:
               
chr3:69417056-69416625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
107, 338
               

               
Conread position:
               
881-1109
               

               
Cow position:
               
chr3:59701746-59701977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
881-1192
               

               
Cow position:
               
chr3:80818462-80818768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
881-1249
               

               
Cow position:
               
chr3:22716548-22716190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
881-1324
               

               
Cow position:
               
chr3:83455419-83454969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
882-1190
               

               
Cow position:
               
chr3:71430478-71430155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
883-1039
               

               
Cow position:
               
chr3:56523766-56523605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
883-1056
               

               
Cow position:
               
chr3:61467340-61467524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
883-1091
               

               
Cow position:
               
chr3:55970960-55971181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
883-1232
               

               
Cow position:
               
chr3:13577449-13577111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
883-1251
               

               
Cow position:
               
chr3:68262515-68262874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
883-1317
               

               
Cow position:
               
chr3:73394851-73395290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 218
               

               
Conread position:
               
883-1321
               

               
Cow position:
               
chr3:33253147-33252713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 200
               

               
Conread position:
               
884-1131
               

               
Cow position:
               
chr3:73590262-73590004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
884-1200
               

               
Cow position:
               
chr3:63507529-63507201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
884-1260
               

               
Cow position:
               
chr3:73460715-73461083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 20
               

               
Conread position:
               
886-1344
               

               
Cow position:
               
chr3:74621259-74620787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
88, 191
               

               
Conread position:
               
886-1344
               

               
Cow position:
               
chr3:75080504-75080954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 164
               

               
Conread position:
               
887-1303
               

               
Cow position:
               
chr3:51234357-51233943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 217
               

               
Conread position:
               
887-1343
               

               
Cow position:
               
chr3:39661709-39661255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
889-1091
               

               
Cow position:
               
chr3:45307675-45307888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
889-1114
               

               
Cow position:
               
chr3:16362998-16362762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 203
               

               
Conread position:
               
889-1293
               

               
Cow position:
               
chr3:52607924-52608332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 171
               

               
Conread position:
               
889-1312
               

               
Cow position:
               
chr3:16333547-16333974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 138
               

               
Conread position:
               
890-1122
               

               
Cow position:
               
chr3:8604272-8604037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
890-1124
               

               
Cow position:
               
chr3:4087424-4087176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
890-1204
               

               
Cow position:
               
chr3:23448389-23448074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
890-1319
               

               
Cow position:
               
chr3:8060874-8061297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 180
               

               
Conread position:
               
890-1339
               

               
Cow position:
               
chr3:71237899-71238346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
890-1342
               

               
Cow position:
               
chr3:30009168-30008708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
891-1184
               

               
Cow position:
               
chr3:22820312-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
73, 280
               

               
Conread position:
               
891-1317
               

               
Cow position:
               
chr3:56476425-56476849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 344
               

               
Conread position:
               
892-1056
               

               
Cow position:
               
chr3:23269846-23270015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
892-1249
               

               
Cow position:
               
chr3:2680255-2680619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 214
               

               
Conread position:
               
892-1319
               

               
Cow position:
               
chr3:18686660-18687078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
893-1130
               

               
Cow position:
               
chr3:48578586-48578831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
893-1342
               

               
Cow position:
               
chr3:26970570-26971011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
894-1137
               

               
Cow position:
               
chr3:41328201-41328439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
894-1225
               

               
Cow position:
               
chr3:18725888-18725560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
896-1077
               

               
Cow position:
               
chr3:82359793-82359980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 141
               

               
Conread position:
               
896-1258
               

               
Cow position:
               
chr3:25754784-25755136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 90
               

               
Conread position:
               
897-1320
               

               
Cow position:
               
chr3:52652325-52651902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
898-1248
               

               
Cow position:
               
chr3:15752878-15752529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
900-1114
               

               
Cow position:
               
chr3:22924646-22924437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
900-1249
               

               
Cow position:
               
chr3:8733589-8733251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
900-1294
               

               
Cow position:
               
chr3:55947327-55947751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
900-1317
               

               
Cow position:
               
chr3:44932260-44932687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 294
               

               
Conread position:
               
900-1331
               

               
Cow position:
               
chr3:43233255-43233692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 193
               

               
Conread position:
               
900-1339
               

               
Cow position:
               
chr3:81087857-81087440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
900-1340
               

               
Cow position:
               
chr3:78092754-78092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
901-1249
               

               
Cow position:
               
chr3:8393692-8394048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
65, 336
               

               
Conread position:
               
903-1089
               

               
Cow position:
               
chr3:77006260-77006442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
904-1183
               

               
Cow position:
               
chr3:30055690-30055415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
904-1212
               

               
Cow position:
               
chr3:23445134-23444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
905-1192
               

               
Cow position:
               
chr3:74878832-74878538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
906-1243
               

               
Cow position:
               
chr3:55836071-55835716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
906-1298
               

               
Cow position:
               
chr3:60265479-60265099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
906-1340
               

               
Cow position:
               
chr3:12705801-12705349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 322
               

               
Conread position:
               
908-1140
               

               
Cow position:
               
chr3:83201768-83201526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
909-1341
               

               
Cow position:
               
chr3:22232882-22232472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 68
               

               
Conread position:
               
910-1056
               

               
Cow position:
               
chr3:4861451-4861604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
910-1199
               

               
Cow position:
               
chr3:34937602-34937902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 236
               

               
Conread position:
               
910-1320
               

               
Cow position:
               
chr3:63315893-63316305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
911-1321
               

               
Cow position:
               
chr3:17134102-17134510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
913-1212
               

               
Cow position:
               
chr3:11711718-11712036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
913-1249
               

               
Cow position:
               
chr3:17447843-17447509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
913-1340
               

               
Cow position:
               
chr3:188624-189074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 313
               

               
Conread position:
               
914-1333
               

               
Cow position:
               
chr3:68156496-68156918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
916-1223
               

               
Cow position:
               
chr3:49140265-49139965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
916-1237
               

               
Cow position:
               
chr3:21547334-21547006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
916-1325
               

               
Cow position:
               
chr3:22888148-22887743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
918-1224
               

               
Cow position:
               
chr3:19404093-19404381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
919-1216
               

               
Cow position:
               
chr3:76015070-76015367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
919-1249
               

               
Cow position:
               
chr3:59621865-59621542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
921-1248
               

               
Cow position:
               
chr3:15506220-15506558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
921-1285
               

               
Cow position:
               
chr3:74119673-74119285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 307
               

               
Conread position:
               
923-1287
               

               
Cow position:
               
chr3:74134480-74134852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
924-1339
               

               
Cow position:
               
chr3:74754105-74754513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
926-1344
               

               
Cow position:
               
chr3:83215031-83215471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
927-1279
               

               
Cow position:
               
chr3:11063157-11063504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
927-1325
               

               
Cow position:
               
chr3:48900553-48900146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
931-1330
               

               
Cow position:
               
chr3:23105583-23105175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 308
               

               
Conread position:
               
932-1174
               

               
Cow position:
               
chr3:35005561-35005809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
932-1288
               

               
Cow position:
               
chr3:25944861-25945241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 297
               

               
Conread position:
               
932-1339
               

               
Cow position:
               
chr3:4319494-4319916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
933-1317
               

               
Cow position:
               
chr3:70609407-70609800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 240
               

               
Conread position:
               
933-1319
               

               
Cow position:
               
chr3:25477597-25477969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
933-1325
               

               
Cow position:
               
chr3:76713537-76713129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
934-1295
               

               
Cow position:
               
chr3:83845690-83846048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 241
               

               
Conread position:
               
934-1319
               

               
Cow position:
               
chr3:54506506-54506883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
936-1340
               

               
Cow position:
               
chr3:55319110-55318701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
942-1249
               

               
Cow position:
               
chr3:53508423-53508717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
942-1340
               

               
Cow position:
               
chr3:27697189-27696767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
942-1343
               

               
Cow position:
               
chr3:79825121-79824718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
946-1215
               

               
Cow position:
               
chr3:7940758-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
957-1344
               

               
Cow position:
               
chr3:26489267-26488877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
959-1330
               

               
Cow position:
               
chr3:19900489-19900844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
960-1187
               

               
Cow position:
               
chr3:79092581-79092346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
962-1341
               

               
Cow position:
               
chr3:30940636-30941004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
964-1331
               

               
Cow position:
               
chr3:51402731-51403087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
964-1336
               

               
Cow position:
               
chr3:45667536-45667149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
971-1224
               

               
Cow position:
               
chr3:79094222-79093960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
975-1324
               

               
Cow position:
               
chr3:15153528-15153870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
977-1317
               

               
Cow position:
               
chr3:60264878-60264547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
978-1245
               

               
Cow position:
               
chr3:20677999-20677740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
978-1317
               

               
Cow position:
               
chr3:6182364-6182058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
979-1222
               

               
Cow position:
               
chr3:74502485-74502244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
979-1249
               

               
Cow position:
               
chr3:26874427-26874699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
979-1317
               

               
Cow position:
               
chr3:36418629-36418312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
979-1317
               

               
Cow position:
               
chr3:70762286-70761948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
979-1318
               

               
Cow position:
               
chr3:55819584-55819925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 220
               

               
Conread position:
               
979-1331
               

               
Cow position:
               
chr3:48810800-48810450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
979-1333
               

               
Cow position:
               
chr3:62046499-62046864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
979-1336
               

               
Cow position:
               
chr3:76922826-76922480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
980-1319
               

               
Cow position:
               
chr3:57273904-57274236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
982-1342
               

               
Cow position:
               
chr3:32787301-32787661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
982-1344
               

               
Cow position:
               
chr3:53095095-53094724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
985-1180
               

               
Cow position:
               
chr3:32184177-32183979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
985-1192
               

               
Cow position:
               
chr3:34294441-34294217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
985-1226
               

               
Cow position:
               
chr3:34669884-34669648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
985-1238
               

               
Cow position:
               
chr3:74242839-74243087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
985-1302
               

               
Cow position:
               
chr3:74079795-74079478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 185
               

               
Conread position:
               
985-1309
               

               
Cow position:
               
chr3:12978773-12978448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
985-1319
               

               
Cow position:
               
chr3:58765233-58764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
985-1319
               

               
Cow position:
               
chr3:76268138-76267796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 250
               

               
Conread position:
               
985-1327
               

               
Cow position:
               
chr3:24468535-24468198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
985-1328
               

               
Cow position:
               
chr3:54374016-54373671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
985-1329
               

               
Cow position:
               
chr3:68616481-68616148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
985-1338
               

               
Cow position:
               
chr3:9663328-9662970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
985-1338
               

               
Cow position:
               
chr3:19792736-19793093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 216
               

               
Conread position:
               
985-1339
               

               
Cow position:
               
chr3:38828611-38828949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
985-1340
               

               
Cow position:
               
chr3:48073030-48072688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
985-1340
               

               
Cow position:
               
chr3:75107638-75107972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 61
               

               
Conread position:
               
985-1343
               

               
Cow position:
               
chr3:35153465-35153808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
341, 40
               

               
Conread position:
               
985-1344
               

               
Cow position:
               
chr3:77581952-77582308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
986-1251
               

               
Cow position:
               
chr3:81507267-81507002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
986-1328
               

               
Cow position:
               
chr3:71478436-71478780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
986-1335
               

               
Cow position:
               
chr3:26981911-26982242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
986-1344
               

               
Cow position:
               
chr3:26739575-26739223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
987-1222
               

               
Cow position:
               
chr3:55109771-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
987-1243
               

               
Cow position:
               
chr3:63269069-63269323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
987-1287
               

               
Cow position:
               
chr3:29946240-29946534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
987-1299
               

               
Cow position:
               
chr3:19793747-19793433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
987-1319
               

               
Cow position:
               
chr3:2648668-2648331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
990-1236
               

               
Cow position:
               
chr3:46541979-46541734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
990-1249
               

               
Cow position:
               
chr3:62789331-62789069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
990-1319
               

               
Cow position:
               
chr3:70334116-70333792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
990-1321
               

               
Cow position:
               
chr3:23920581-23920247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
990-1325
               

               
Cow position:
               
chr3:54100873-54100530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
990-1332
               

               
Cow position:
               
chr3:55177904-55177560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 243
               

               
Conread position:
               
991-1318
               

               
Cow position:
               
chr3:19585711-19586040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
992-1203
               

               
Cow position:
               
chr3:78896499-78896709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
992-1303
               

               
Cow position:
               
chr3:79196610-79196924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
994-1286
               

               
Cow position:
               
chr3:10372133-10372405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
994-1331
               

               
Cow position:
               
chr3:74584071-74584379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
994-1344
               

               
Cow position:
               
chr3:46146880-46146523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
995-1265
               

               
Cow position:
               
chr3:79645590-79645304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
995-1338
               

               
Cow position:
               
chr3:53318257-53318608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
995-1340
               

               
Cow position:
               
chr3:3883965-3883622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
998-1246
               

               
Cow position:
               
chr3:1785385-1785139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
238, 82
               

               
Conread position:
               
999-1326
               

               
Cow position:
               
chr3:14194322-14194006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1000-1337
               

               
Cow position:
               
chr3:59040426-59040765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1000-1338
               

               
Cow position:
               
chr3:17331585-17331915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
1000-1339
               

               
Cow position:
               
chr3:47417707-47417373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
1001-1313
               

               
Cow position:
               
chr3:17058680-17058376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
1001-1327
               

               
Cow position:
               
chr3:72342104-72342433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
1003-1318
               

               
Cow position:
               
chr3:17235347-17235028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
1003-1324
               

               
Cow position:
               
chr3:18426838-18426518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
1003-1329
               

               
Cow position:
               
chr3:78093522-78093206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
1004-1338
               

               
Cow position:
               
chr3:73237057-73237379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
1005-1337
               

               
Cow position:
               
chr3:174811-175137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
1009-1319
               

               
Cow position:
               
chr3:7661720-7662035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
1009-1325
               

               
Cow position:
               
chr3:18059569-18059887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 222
               

               
Conread position:
               
1009-1336
               

               
Cow position:
               
chr3:76155855-76156181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
1010-1293
               

               
Cow position:
               
chr3:71238342-71238626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
1010-1321
               

               
Cow position:
               
chr3:15443861-15443547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
1010-1325
               

               
Cow position:
               
chr3:13890344-13890666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
1010-1343
               

               
Cow position:
               
chr3:64526716-64527046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
1012-1319
               

               
Cow position:
               
chr3:1517643-1517336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
1012-1342
               

               
Cow position:
               
chr3:35056108-35055777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
1015-1204
               

               
Cow position:
               
chr3:12670741-12670552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
1015-1303
               

               
Cow position:
               
chr3:13380413-13380117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 225
               

               
Conread position:
               
1015-1335
               

               
Cow position:
               
chr3:21015087-21014765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
1015-1339
               

               
Cow position:
               
chr3:58134814-58134487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1016-1246
               

               
Cow position:
               
chr3:54290635-54290407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
1018-1339
               

               
Cow position:
               
chr3:48468059-48468371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
1021-1342
               

               
Cow position:
               
chr3:26992446-26992771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 189
               

               
Conread position:
               
1022-1327
               

               
Cow position:
               
chr3:15951031-15950732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
1023-1251
               

               
Cow position:
               
chr3:63177360-63177590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 203
               

               
Conread position:
               
1025-1332
               

               
Cow position:
               
chr3:58318070-58317752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1025-1341
               

               
Cow position:
               
chr3:22668298-22668610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
1025-1343
               

               
Cow position:
               
chr3:58527281-58527577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1026-1336
               

               
Cow position:
               
chr3:4268698-4268377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
1028-1303
               

               
Cow position:
               
chr3:14546891-14547160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
1030-1332
               

               
Cow position:
               
chr3:21867149-21866848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
1031-1327
               

               
Cow position:
               
chr3:48459439-48459143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
1032-1278
               

               
Cow position:
               
chr3:32409103-32409356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1033-1244
               

               
Cow position:
               
chr3:55983986-55984199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
1033-1246
               

               
Cow position:
               
chr3:33693709-33693922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
1033-1288
               

               
Cow position:
               
chr3:65019974-65019711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
1033-1339
               

               
Cow position:
               
chr3:57704214-57704531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
1034-1303
               

               
Cow position:
               
chr3:9116920-9117195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
1035-1344
               

               
Cow position:
               
chr3:3656407-3656717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
1038-1336
               

               
Cow position:
               
chr3:3316916-3316610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
1039-1343
               

               
Cow position:
               
chr3:69785726-69785420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
1041-1313
               

               
Cow position:
               
chr3:75608398-75608659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
1044-1216
               

               
Cow position:
               
chr3:3471942-3472115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
1044-1275
               

               
Cow position:
               
chr3:19626605-19626374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
1044-1318
               

               
Cow position:
               
chr3:31361322-31361599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
1044-1319
               

               
Cow position:
               
chr3:1036931-1037205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
213, 44
               

               
Conread position:
               
1044-1325
               

               
Cow position:
               
chr3:18607566-18607846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 200
               

               
Conread position:
               
1044-1337
               

               
Cow position:
               
chr3:22165513-22165220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
1045-1317
               

               
Cow position:
               
chr3:4548920-4549192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
1045-1320
               

               
Cow position:
               
chr3:5707309-5707032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
174, 161
               

               
Conread position:
               
1045-1335
               

               
Cow position:
               
chr3:47753129-47753434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1045-1338
               

               
Cow position:
               
chr3:49363020-49363303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1052-1186
               

               
Cow position:
               
chr3:19162524-19162656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
1052-1302
               

               
Cow position:
               
chr3:31350193-31349948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
1052-1317
               

               
Cow position:
               
chr3:71474496-71474232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
1053-1249
               

               
Cow position:
               
chr3:15172991-15173187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
1053-1321
               

               
Cow position:
               
chr3:19682605-19682886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1053-1342
               

               
Cow position:
               
chr3:54067706-54067997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
1055-1338
               

               
Cow position:
               
chr3:10591603-10591314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
1055-1340
               

               
Cow position:
               
chr3:64196739-64197023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
1058-1206
               

               
Cow position:
               
chr3:478882-478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1058-1245
               

               
Cow position:
               
chr3:44330520-44330335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
1058-1249
               

               
Cow position:
               
chr3:4480858-4481048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
1058-1298
               

               
Cow position:
               
chr3:10668961-10668723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
1058-1331
               

               
Cow position:
               
chr3:59299494-59299764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
1059-1335
               

               
Cow position:
               
chr3:76269816-76270078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1066-1337
               

               
Cow position:
               
chr3:79272647-79272380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
1069-1249
               

               
Cow position:
               
chr3:74802139-74801960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
1071-1319
               

               
Cow position:
               
chr3:63844860-63845117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
1073-1338
               

               
Cow position:
               
chr3:79271779-79271514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
1074-1321
               

               
Cow position:
               
chr3:84174234-84174483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
140, 120
               

               
Conread position:
               
1076-1336
               

               
Cow position:
               
chr3:46792321-46792576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
1077-1332
               

               
Cow position:
               
chr3:75173643-75173411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1078-1336
               

               
Cow position:
               
chr3:51609247-51608988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
1079-1344
               

               
Cow position:
               
chr3:56949150-56948894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1081-1224
               

               
Cow position:
               
chr3:29828207-29828064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
1081-1251
               

               
Cow position:
               
chr3:21997847-21997680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1081-1333
               

               
Cow position:
               
chr3:68004763-68004522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
1081-1334
               

               
Cow position:
               
chr3:71423609-71423376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
233, 12
               

               
Conread position:
               
1082-1318
               

               
Cow position:
               
chr3:49344634-49344868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
143, 208
               

               
Conread position:
               
1083-1321
               

               
Cow position:
               
chr3:23132227-23131989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1083-1333
               

               
Cow position:
               
chr3:69650947-69650708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
167, 145
               

               
Conread position:
               
1086-1245
               

               
Cow position:
               
chr3:64648438-64648594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1086-1249
               

               
Cow position:
               
chr3:82629261-82629423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1087-1226
               

               
Cow position:
               
chr3:51349769-51349908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1087-1326
               

               
Cow position:
               
chr3:9120791-9121026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
1087-1334
               

               
Cow position:
               
chr3:5040361-5040111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
1087-1340
               

               
Cow position:
               
chr3:27083103-27082843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
1088-1287
               

               
Cow position:
               
chr3:16505528-16505339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1089-1318
               

               
Cow position:
               
chr3:44961056-44960842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1090-1304
               

               
Cow position:
               
chr3:53084039-53083821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1090-1327
               

               
Cow position:
               
chr3:11281715-11281955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 114
               

               
Conread position:
               
1092-1320
               

               
Cow position:
               
chr3:52845501-52845733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
1093-1286
               

               
Cow position:
               
chr3:8349613-8349424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
1093-1332
               

               
Cow position:
               
chr3:3946990-3947226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 133
               

               
Conread position:
               
1094-1248
               

               
Cow position:
               
chr3:38100094-38100248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
1094-1308
               

               
Cow position:
               
chr3:26603602-26603380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1094-1319
               

               
Cow position:
               
chr3:5305751-5305985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1095-1231
               

               
Cow position:
               
chr3:41652330-41652466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1096-1297
               

               
Cow position:
               
chr3:82123593-82123398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
1101-1337
               

               
Cow position:
               
chr3:41863584-41863821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
1101-1337
               

               
Cow position:
               
chr3:44959902-44960140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1101-1338
               

               
Cow position:
               
chr3:4120406-4120175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1107-1342
               

               
Cow position:
               
chr3:22924409-22924182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1109-1242
               

               
Cow position:
               
chr3:24371890-24372020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1110-1282
               

               
Cow position:
               
chr3:73421524-73421352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1110-1314
               

               
Cow position:
               
chr3:20021238-20021440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1112-1327
               

               
Cow position:
               
chr3:67407395-67407180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
206, 116
               

               
Conread position:
               
1117-1289
               

               
Cow position:
               
chr3:19788854-19788684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1119-1331
               

               
Cow position:
               
chr3:59947643-59947856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 198
               

               
Conread position:
               
1120-1316
               

               
Cow position:
               
chr3:31115291-31115104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1120-1329
               

               
Cow position:
               
chr3:73701483-73701685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
1120-1338
               

               
Cow position:
               
chr3:75966802-75966586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
1122-1329
               

               
Cow position:
               
chr3:985995-986202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
1122-1343
               

               
Cow position:
               
chr3:27286499-27286720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
198, 106
               

               
Conread position:
               
1122-1343
               

               
Cow position:
               
chr3:70402625-70402839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1124-1303
               

               
Cow position:
               
chr3:25289827-25290004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1125-1331
               

               
Cow position:
               
chr3:25038008-25037814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1125-1337
               

               
Cow position:
               
chr3:76056301-76056093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1127-1341
               

               
Cow position:
               
chr3:76168646-76168427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
1128-1282
               

               
Cow position:
               
chr3:28870794-28870947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1131-1337
               

               
Cow position:
               
chr3:19709100-19709300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1132-1317
               

               
Cow position:
               
chr3:41510567-41510753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
1132-1321
               

               
Cow position:
               
chr3:22868729-22868536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1132-1330
               

               
Cow position:
               
chr3:23818482-23818677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
1133-1319
               

               
Cow position:
               
chr3:43896068-43895886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1133-1328
               

               
Cow position:
               
chr3:56943934-56943744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1133-1331
               

               
Cow position:
               
chr3:35074870-35075060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1133-1334
               

               
Cow position:
               
chr3:43389136-43388934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
1134-1332
               

               
Cow position:
               
chr3:11027267-11027467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
1136-1329
               

               
Cow position:
               
chr3:55730474-55730279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
1139-1332
               

               
Cow position:
               
chr3:23037511-23037318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
1139-1336
               

               
Cow position:
               
chr3:78258757-78258556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
1139-1337
               

               
Cow position:
               
chr3:2016433-2016625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1139-1339
               

               
Cow position:
               
chr3:83934723-83934921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
1140-1331
               

               
Cow position:
               
chr3:17531739-17531550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
86, 168
               

               
Conread position:
               
1144-1332
               

               
Cow position:
               
chr3:26977537-26977729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
1145-1317
               

               
Cow position:
               
chr3:74050698-74050531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1148-1317
               

               
Cow position:
               
chr3:26393293-26393124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1148-1337
               

               
Cow position:
               
chr3:44782346-44782535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
1148-1338
               

               
Cow position:
               
chr3:64910089-64909900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1148-1342
               

               
Cow position:
               
chr3:59588645-59588843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
1148-1343
               

               
Cow position:
               
chr3:19611345-19611153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1343
               

               
Cow position:
               
chr3:21959666-21959866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
1148-1344
               

               
Cow position:
               
chr3:24774660-24774847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
1150-1341
               

               
Cow position:
               
chr3:68624226-68624420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1152-1327
               

               
Cow position:
               
chr3:32436649-32436823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
1152-1327
               

               
Cow position:
               
chr3:77098812-77098638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 76
               

               
Conread position:
               
1154-1341
               

               
Cow position:
               
chr3:68565834-68566011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1157-1303
               

               
Cow position:
               
chr3:10115314-10115456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1157-1320
               

               
Cow position:
               
chr3:2636965-2637123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1158-1317
               

               
Cow position:
               
chr3:8523137-8522979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
1162-1318
               

               
Cow position:
               
chr3:22078096-22078254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1165-1327
               

               
Cow position:
               
chr3:75907935-75908097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
1199-1343
               

               
Cow position:
               
chr3:74495573-74495715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.