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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8044K22.5.5
        

               
Conread position:
               
798-1249
               

               
Cow position:
               
chr5:53855401-53855862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
812-1130
               

               
Cow position:
               
chr5:50975599-50975941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
812-1167
               

               
Cow position:
               
chr5:58229416-58229772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 179
               

               
Conread position:
               
812-1212
               

               
Cow position:
               
chr5:31640143-31640546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 28
               

               
Conread position:
               
821-1172
               

               
Cow position:
               
chr5:26595381-26595022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 68
               

               
Conread position:
               
826-1192
               

               
Cow position:
               
chr5:22839747-22839373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
826-1321
               

               
Cow position:
               
chr5:64176395-64175899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 244
               

               
Conread position:
               
827-1085
               

               
Cow position:
               
chr5:54427872-54427612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
828-1137
               

               
Cow position:
               
chr5:442559-442245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
828-1142
               

               
Cow position:
               
chr5:709396-709073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
828-1146
               

               
Cow position:
               
chr5:13807007-13806682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
828-1295
               

               
Cow position:
               
chr5:50483132-50482654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
828-1331
               

               
Cow position:
               
chr5:55068451-55068939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
830-985
               

               
Cow position:
               
chr5:48238357-48238207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
830-1236
               

               
Cow position:
               
chr5:29771250-29771671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
831-927
               

               
Cow position:
               
chr5:41976112-41976017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
831-985
               

               
Cow position:
               
chr5:19969299-19969146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
831-1114
               

               
Cow position:
               
chr5:64392887-64393179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
831-1117
               

               
Cow position:
               
chr5:23856430-23856133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
831-1163
               

               
Cow position:
               
chr5:63840414-63840071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
156, 241
               

               
Conread position:
               
831-1183
               

               
Cow position:
               
chr5:34049841-34050210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
831-1183
               

               
Cow position:
               
chr5:66815848-66815480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
831-1225
               

               
Cow position:
               
chr5:27419989-27419595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
831-1312
               

               
Cow position:
               
chr5:72045908-72045456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 12
               

               
Conread position:
               
831-1322
               

               
Cow position:
               
chr5:56523907-56524393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
832-985
               

               
Cow position:
               
chr5:37091042-37090889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
832-1130
               

               
Cow position:
               
chr5:26561889-26562197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
832-1155
               

               
Cow position:
               
chr5:3281135-3280808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
832-1192
               

               
Cow position:
               
chr5:33661587-33661947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 206
               

               
Conread position:
               
832-1245
               

               
Cow position:
               
chr5:60715622-60715214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 223
               

               
Conread position:
               
832-1278
               

               
Cow position:
               
chr5:28247909-28248362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
142, 256
               

               
Conread position:
               
832-1317
               

               
Cow position:
               
chr5:47871317-47870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
832-1321
               

               
Cow position:
               
chr5:47317235-47316745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
832-1344
               

               
Cow position:
               
chr5:34506193-34505671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 198
               

               
Conread position:
               
833-1086
               

               
Cow position:
               
chr5:33347995-33348241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
833-1087
               

               
Cow position:
               
chr5:65933193-65932930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
833-1093
               

               
Cow position:
               
chr5:54126815-54127077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
833-1248
               

               
Cow position:
               
chr5:50533651-50533233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
833-1318
               

               
Cow position:
               
chr5:29680813-29681321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
833-1332
               

               
Cow position:
               
chr5:47888980-47888488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
833-1340
               

               
Cow position:
               
chr5:60210404-60209897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
833-1344
               

               
Cow position:
               
chr5:61600146-61600660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 275
               

               
Conread position:
               
834-984
               

               
Cow position:
               
chr5:59873790-59873647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
834-1023
               

               
Cow position:
               
chr5:41981136-41981328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
834-1128
               

               
Cow position:
               
chr5:58460670-58460360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
107, 267
               

               
Conread position:
               
834-1183
               

               
Cow position:
               
chr5:39094288-39094642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
834-1258
               

               
Cow position:
               
chr5:39299263-39299693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
834-1317
               

               
Cow position:
               
chr5:72035350-72034874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 191
               

               
Conread position:
               
834-1319
               

               
Cow position:
               
chr5:6528415-6528892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 132
               

               
Conread position:
               
834-1330
               

               
Cow position:
               
chr5:43858693-43858179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 104
               

               
Conread position:
               
834-1336
               

               
Cow position:
               
chr5:23140843-23140343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 231
               

               
Conread position:
               
834-1336
               

               
Cow position:
               
chr5:39936838-39937359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 64
               

               
Conread position:
               
835-1089
               

               
Cow position:
               
chr5:19978149-19977887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
835-1169
               

               
Cow position:
               
chr5:13691839-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
835-1319
               

               
Cow position:
               
chr5:28224192-28224670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
836-1221
               

               
Cow position:
               
chr5:37758067-37757709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
207, 122
               

               
Conread position:
               
837-984
               

               
Cow position:
               
chr5:40269989-40269846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
837-1214
               

               
Cow position:
               
chr5:41129505-41129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
837-1236
               

               
Cow position:
               
chr5:59326091-59325698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
838-1263
               

               
Cow position:
               
chr5:26370446-26370858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
839-1174
               

               
Cow position:
               
chr5:34638625-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 251
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr5:46754469-46754613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
841-985
               

               
Cow position:
               
chr5:60015663-60015805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
841-1045
               

               
Cow position:
               
chr5:40058319-40058508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
841-1088
               

               
Cow position:
               
chr5:50729237-50729492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 217
               

               
Conread position:
               
841-1116
               

               
Cow position:
               
chr5:7763815-7764099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
841-1146
               

               
Cow position:
               
chr5:27403502-27403174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
841-1224
               

               
Cow position:
               
chr5:50821530-50821916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 105
               

               
Conread position:
               
841-1231
               

               
Cow position:
               
chr5:27103051-27102654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 254
               

               
Conread position:
               
841-1245
               

               
Cow position:
               
chr5:25231273-25230865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 218
               

               
Conread position:
               
841-1319
               

               
Cow position:
               
chr5:9894385-9893897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
841-1320
               

               
Cow position:
               
chr5:41164833-41165311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
841-1337
               

               
Cow position:
               
chr5:17999754-17999251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 263
               

               
Conread position:
               
841-1342
               

               
Cow position:
               
chr5:12873486-12874003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
842-963
               

               
Cow position:
               
chr5:24919134-24919013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-963
               

               
Cow position:
               
chr5:41487011-41487132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-972
               

               
Cow position:
               
chr5:73070190-73070320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr5:75259571-75259704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr5:27011037-27011175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
842-981
               

               
Cow position:
               
chr5:52289515-52289655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr5:765465-765601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr5:12718996-12719136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr5:46023435-46023297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr5:46130037-46129899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr5:72902301-72902441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-984
               

               
Cow position:
               
chr5:21944124-21944267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
842-985
               

               
Cow position:
               
chr5:58770107-58769964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
842-988
               

               
Cow position:
               
chr5:60947961-60948106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr5:57494672-57494523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
842-989
               

               
Cow position:
               
chr5:62436891-62437039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
842-1001
               

               
Cow position:
               
chr5:19751597-19751753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
842-1006
               

               
Cow position:
               
chr5:46080513-46080343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr5:45881444-45881279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
148, 141
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr5:46235063-46234900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
842-1008
               

               
Cow position:
               
chr5:50645709-50645547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
842-1015
               

               
Cow position:
               
chr5:58316769-58316600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
842-1028
               

               
Cow position:
               
chr5:53825267-53825450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1050
               

               
Cow position:
               
chr5:37366633-37366859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
842-1056
               

               
Cow position:
               
chr5:62678401-62678628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
842-1063
               

               
Cow position:
               
chr5:12672279-12672057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
842-1063
               

               
Cow position:
               
chr5:63103654-63103889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
842-1065
               

               
Cow position:
               
chr5:16085055-16084819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
842-1065
               

               
Cow position:
               
chr5:30808874-30808639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
842-1073
               

               
Cow position:
               
chr5:59303525-59303298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
842-1078
               

               
Cow position:
               
chr5:30816458-30816707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
842-1079
               

               
Cow position:
               
chr5:42667649-42667400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
842-1082
               

               
Cow position:
               
chr5:31730929-31731186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
842-1083
               

               
Cow position:
               
chr5:14538906-14538666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
842-1083
               

               
Cow position:
               
chr5:44703085-44703323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 53
               

               
Conread position:
               
842-1083
               

               
Cow position:
               
chr5:56753471-56753720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
842-1086
               

               
Cow position:
               
chr5:35145093-35145346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
842-1086
               

               
Cow position:
               
chr5:50839591-50839843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 206
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr5:17631130-17630878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr5:20974703-20974444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
842-1088
               

               
Cow position:
               
chr5:38831252-38830994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
842-1090
               

               
Cow position:
               
chr5:59298216-59297957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 189
               

               
Conread position:
               
842-1091
               

               
Cow position:
               
chr5:62428008-62428267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 241
               

               
Conread position:
               
842-1092
               

               
Cow position:
               
chr5:3491944-3492197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 140
               

               
Conread position:
               
842-1092
               

               
Cow position:
               
chr5:14832861-14832620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
842-1095
               

               
Cow position:
               
chr5:26505663-26505397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 260
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr5:4952499-4952767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr5:44369637-44369889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 144
               

               
Conread position:
               
842-1096
               

               
Cow position:
               
chr5:61543693-61543955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 237
               

               
Conread position:
               
842-1099
               

               
Cow position:
               
chr5:20410895-20410621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
842-1103
               

               
Cow position:
               
chr5:18287409-18287678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 239
               

               
Conread position:
               
842-1105
               

               
Cow position:
               
chr5:43329950-43329680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:43990136-43990413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:48972334-48972612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
135, 255
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:50622478-50622203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 260
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:59269486-59269757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:62173416-62173689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 251
               

               
Conread position:
               
842-1107
               

               
Cow position:
               
chr5:63033116-63033386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 235
               

               
Conread position:
               
842-1114
               

               
Cow position:
               
chr5:41229455-41229731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 88
               

               
Conread position:
               
842-1115
               

               
Cow position:
               
chr5:14420602-14420316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 205
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr5:37626614-37626896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
142, 178
               

               
Conread position:
               
842-1116
               

               
Cow position:
               
chr5:59443508-59443223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
842-1123
               

               
Cow position:
               
chr5:43474589-43474877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 250
               

               
Conread position:
               
842-1123
               

               
Cow position:
               
chr5:65924958-65924657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
842-1125
               

               
Cow position:
               
chr5:19470440-19470156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
842-1127
               

               
Cow position:
               
chr5:62827012-62826716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr5:6584762-6584469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
131, 257
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr5:10772062-10771767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 259
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr5:14153885-14154187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 295
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr5:31261794-31262092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1128
               

               
Cow position:
               
chr5:50979546-50979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 259
               

               
Conread position:
               
842-1130
               

               
Cow position:
               
chr5:59518248-59517946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 214
               

               
Conread position:
               
842-1131
               

               
Cow position:
               
chr5:15112487-15112187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 261
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr5:2395340-2395646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
145, 261
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr5:19020477-19020177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 141
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr5:40130055-40129748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 262
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr5:55685305-55685612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 262
               

               
Conread position:
               
842-1139
               

               
Cow position:
               
chr5:6086819-6086512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 253
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr5:69099269-69099572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 221
               

               
Conread position:
               
842-1140
               

               
Cow position:
               
chr5:70050497-70050791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
170, 27
               

               
Conread position:
               
842-1146
               

               
Cow position:
               
chr5:38683099-38683414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
842-1146
               

               
Cow position:
               
chr5:58202300-58202614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 241
               

               
Conread position:
               
842-1151
               

               
Cow position:
               
chr5:64844374-64844058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
842-1159
               

               
Cow position:
               
chr5:14141430-14141759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 283
               

               
Conread position:
               
842-1160
               

               
Cow position:
               
chr5:54405151-54404820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
842-1170
               

               
Cow position:
               
chr5:20555006-20554675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
842-1175
               

               
Cow position:
               
chr5:45170104-45170443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 243
               

               
Conread position:
               
842-1180
               

               
Cow position:
               
chr5:44583375-44583023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
842-1186
               

               
Cow position:
               
chr5:16508839-16509201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1190
               

               
Cow position:
               
chr5:35209729-35209377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
842-1192
               

               
Cow position:
               
chr5:61839931-61840289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
842-1199
               

               
Cow position:
               
chr5:65887271-65886902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
842-1201
               

               
Cow position:
               
chr5:22071829-22072193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 202
               

               
Conread position:
               
842-1202
               

               
Cow position:
               
chr5:31480896-31481259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 144
               

               
Conread position:
               
842-1203
               

               
Cow position:
               
chr5:22934713-22934344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
842-1208
               

               
Cow position:
               
chr5:11639263-11639641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 260
               

               
Conread position:
               
842-1209
               

               
Cow position:
               
chr5:20407920-20407560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
842-1212
               

               
Cow position:
               
chr5:58793872-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 267
               

               
Conread position:
               
842-1221
               

               
Cow position:
               
chr5:15598491-15598108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 212
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr5:6045029-6045429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr5:29903779-29903390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
842-1224
               

               
Cow position:
               
chr5:63992421-63992039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 188
               

               
Conread position:
               
842-1226
               

               
Cow position:
               
chr5:20783369-20783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
842-1227
               

               
Cow position:
               
chr5:28927854-28927457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 326
               

               
Conread position:
               
842-1231
               

               
Cow position:
               
chr5:27007639-27008033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr5:15478851-15479269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 277
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr5:17027841-17028240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
842-1237
               

               
Cow position:
               
chr5:28946316-28945915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 165
               

               
Conread position:
               
842-1240
               

               
Cow position:
               
chr5:360202-359790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
842-1245
               

               
Cow position:
               
chr5:4166413-4166794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
842-1246
               

               
Cow position:
               
chr5:41546147-41545740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
842-1248
               

               
Cow position:
               
chr5:63987704-63987290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr5:16206399-16205999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr5:26094426-26094010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
842-1249
               

               
Cow position:
               
chr5:51151620-51151197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
842-1252
               

               
Cow position:
               
chr5:44752569-44752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
842-1283
               

               
Cow position:
               
chr5:26990136-26990572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 288
               

               
Conread position:
               
842-1286
               

               
Cow position:
               
chr5:64139306-64139752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
842-1288
               

               
Cow position:
               
chr5:47704392-47703928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 268
               

               
Conread position:
               
842-1294
               

               
Cow position:
               
chr5:5938067-5938529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 239
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr5:3281574-3282049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr5:4507218-4506751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
141, 248
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr5:12352039-12351600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr5:14314265-14314728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
842-1303
               

               
Cow position:
               
chr5:26097040-26097502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
842-1305
               

               
Cow position:
               
chr5:45705790-45706250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 204
               

               
Conread position:
               
842-1309
               

               
Cow position:
               
chr5:50599809-50600264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
842-1317
               

               
Cow position:
               
chr5:45845950-45845464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr5:21617198-21617683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr5:43923406-43922942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr5:47756511-47757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 283
               

               
Conread position:
               
842-1319
               

               
Cow position:
               
chr5:65941510-65941022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr5:19278950-19278472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
842-1321
               

               
Cow position:
               
chr5:74643918-74643453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
842-1325
               

               
Cow position:
               
chr5:61725713-61726190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
842-1327
               

               
Cow position:
               
chr5:44848268-44847791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
842-1328
               

               
Cow position:
               
chr5:21524907-21525395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 266
               

               
Conread position:
               
842-1329
               

               
Cow position:
               
chr5:31097062-31096565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
55, 192
               

               
Conread position:
               
842-1329
               

               
Cow position:
               
chr5:32394341-32394840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr5:26467365-26467867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
842-1332
               

               
Cow position:
               
chr5:50722793-50723289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 86
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr5:59183-58688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr5:6219847-6220367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
117, 302
               

               
Conread position:
               
842-1334
               

               
Cow position:
               
chr5:30276438-30276931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr5:18573913-18574426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 199
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr5:26133331-26132853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 123
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr5:42845857-42845355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
842-1335
               

               
Cow position:
               
chr5:55176635-55177126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
842-1336
               

               
Cow position:
               
chr5:42063946-42064450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr5:18702470-18701972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 209
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr5:31469840-31469345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr5:63647724-63647229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
842-1339
               

               
Cow position:
               
chr5:65752602-65753107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr5:37942050-37941555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
842-1340
               

               
Cow position:
               
chr5:62870292-62869811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
842-1341
               

               
Cow position:
               
chr5:46052061-46051546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
842-1342
               

               
Cow position:
               
chr5:61576282-61576797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 242
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:12149289-12149804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:32153573-32153060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 189
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:38853102-38853605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 218
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:40889540-40889044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:56467447-56467922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
842-1344
               

               
Cow position:
               
chr5:58519656-58519161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
843-1081
               

               
Cow position:
               
chr5:6986901-6987154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
843-1131
               

               
Cow position:
               
chr5:49820885-49821180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
843-1202
               

               
Cow position:
               
chr5:52645336-52644969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 241
               

               
Conread position:
               
843-1222
               

               
Cow position:
               
chr5:34442049-34441649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
844-981
               

               
Cow position:
               
chr5:50573501-50573638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
844-985
               

               
Cow position:
               
chr5:56568973-56569113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
844-985
               

               
Cow position:
               
chr5:63388540-63388680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
844-1137
               

               
Cow position:
               
chr5:15530114-15529811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
844-1137
               

               
Cow position:
               
chr5:74161953-74161652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
129, 256
               

               
Conread position:
               
844-1252
               

               
Cow position:
               
chr5:21040229-21039826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
845-945
               

               
Cow position:
               
chr5:66972148-66972248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-948
               

               
Cow position:
               
chr5:12867103-12867000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr5:4551878-4552017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
845-985
               

               
Cow position:
               
chr5:58004990-58005129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
845-989
               

               
Cow position:
               
chr5:46708926-46709071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
845-1008
               

               
Cow position:
               
chr5:31053167-31053326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
845-1010
               

               
Cow position:
               
chr5:37255610-37255445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
845-1031
               

               
Cow position:
               
chr5:60730032-60730215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
845-1083
               

               
Cow position:
               
chr5:61656352-61656595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 165
               

               
Conread position:
               
845-1108
               

               
Cow position:
               
chr5:70290231-70290492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
845-1169
               

               
Cow position:
               
chr5:32140959-32140630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
845-1179
               

               
Cow position:
               
chr5:41951334-41951008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
845-1186
               

               
Cow position:
               
chr5:38805598-38805250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
167, 137
               

               
Conread position:
               
845-1192
               

               
Cow position:
               
chr5:50637577-50637922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
845-1249
               

               
Cow position:
               
chr5:46510122-46509706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 181
               

               
Conread position:
               
845-1303
               

               
Cow position:
               
chr5:33414659-33414196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
845-1303
               

               
Cow position:
               
chr5:57327535-57328009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
845-1316
               

               
Cow position:
               
chr5:35763036-35763469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 102
               

               
Conread position:
               
845-1316
               

               
Cow position:
               
chr5:55756696-55756188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
845-1319
               

               
Cow position:
               
chr5:64321494-64321990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 180
               

               
Conread position:
               
845-1334
               

               
Cow position:
               
chr5:62107749-62107244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
138, 249
               

               
Conread position:
               
845-1343
               

               
Cow position:
               
chr5:29827799-29828301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 114
               

               
Conread position:
               
846-982
               

               
Cow position:
               
chr5:9867923-9868059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
846-1140
               

               
Cow position:
               
chr5:4797564-4797274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 245
               

               
Conread position:
               
846-1327
               

               
Cow position:
               
chr5:45226082-45225583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
846-1342
               

               
Cow position:
               
chr5:53055806-53055308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
847-956
               

               
Cow position:
               
chr5:57787125-57787234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-958
               

               
Cow position:
               
chr5:12316062-12316173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-982
               

               
Cow position:
               
chr5:31104050-31104185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-982
               

               
Cow position:
               
chr5:72701262-72701129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr5:29741788-29741650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr5:41936051-41935915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
847-985
               

               
Cow position:
               
chr5:63967898-63967765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
847-1045
               

               
Cow position:
               
chr5:15462470-15462668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
847-1045
               

               
Cow position:
               
chr5:63917662-63917457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
847-1067
               

               
Cow position:
               
chr5:51683497-51683285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
847-1124
               

               
Cow position:
               
chr5:34288722-34288435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
847-1128
               

               
Cow position:
               
chr5:29255441-29255148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 257
               

               
Conread position:
               
847-1128
               

               
Cow position:
               
chr5:41523045-41522764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
847-1130
               

               
Cow position:
               
chr5:26790699-26790416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
847-1135
               

               
Cow position:
               
chr5:16184837-16185132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
847-1146
               

               
Cow position:
               
chr5:59759138-59759429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
847-1154
               

               
Cow position:
               
chr5:56443026-56443338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
847-1162
               

               
Cow position:
               
chr5:11786628-11786951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 178
               

               
Conread position:
               
847-1183
               

               
Cow position:
               
chr5:65601208-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 209
               

               
Conread position:
               
847-1218
               

               
Cow position:
               
chr5:24348859-24349233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
847-1221
               

               
Cow position:
               
chr5:61488363-61487982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
847-1225
               

               
Cow position:
               
chr5:4617123-4617498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
847-1240
               

               
Cow position:
               
chr5:68082215-68081824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
210, 13
               

               
Conread position:
               
847-1245
               

               
Cow position:
               
chr5:37190348-37189945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
847-1246
               

               
Cow position:
               
chr5:44054290-44053901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 221
               

               
Conread position:
               
847-1269
               

               
Cow position:
               
chr5:34528309-34528723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 191
               

               
Conread position:
               
847-1295
               

               
Cow position:
               
chr5:55942649-55942173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
847-1296
               

               
Cow position:
               
chr5:66366279-66366714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
847-1298
               

               
Cow position:
               
chr5:64524134-64523657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
847-1299
               

               
Cow position:
               
chr5:26377919-26377472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 163
               

               
Conread position:
               
847-1299
               

               
Cow position:
               
chr5:35826338-35826806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 240
               

               
Conread position:
               
847-1313
               

               
Cow position:
               
chr5:30486996-30487449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
847-1319
               

               
Cow position:
               
chr5:52165434-52164945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
847-1320
               

               
Cow position:
               
chr5:60952407-60952891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
847-1329
               

               
Cow position:
               
chr5:66257390-66257870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
847-1337
               

               
Cow position:
               
chr5:44796970-44796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
847-1340
               

               
Cow position:
               
chr5:66338832-66339322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
847-1341
               

               
Cow position:
               
chr5:27179402-27179915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
848-965
               

               
Cow position:
               
chr5:58208501-58208615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
848-975
               

               
Cow position:
               
chr5:39284532-39284404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
848-981
               

               
Cow position:
               
chr5:56648384-56648252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
848-982
               

               
Cow position:
               
chr5:51746990-51747124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
848-1095
               

               
Cow position:
               
chr5:54337672-54337918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
848-1106
               

               
Cow position:
               
chr5:5035762-5035498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 258
               

               
Conread position:
               
848-1106
               

               
Cow position:
               
chr5:6575833-6575574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 5
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr5:43437168-43436897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr5:49220723-49220463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 224
               

               
Conread position:
               
848-1107
               

               
Cow position:
               
chr5:63566055-63566327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 257
               

               
Conread position:
               
848-1112
               

               
Cow position:
               
chr5:42676983-42677254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 119
               

               
Conread position:
               
848-1116
               

               
Cow position:
               
chr5:50950302-50950579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 250
               

               
Conread position:
               
848-1123
               

               
Cow position:
               
chr5:51357753-51357469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
848-1133
               

               
Cow position:
               
chr5:34915891-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
848-1137
               

               
Cow position:
               
chr5:27015441-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
848-1174
               

               
Cow position:
               
chr5:47313222-47313556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 251
               

               
Conread position:
               
848-1238
               

               
Cow position:
               
chr5:72564507-72564909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
848-1249
               

               
Cow position:
               
chr5:5111328-5110913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 396
               

               
Conread position:
               
848-1277
               

               
Cow position:
               
chr5:7193181-7193599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
848-1318
               

               
Cow position:
               
chr5:30302647-30303108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
848-1319
               

               
Cow position:
               
chr5:17087281-17086789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 229
               

               
Conread position:
               
848-1325
               

               
Cow position:
               
chr5:28330583-28330107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 252
               

               
Conread position:
               
848-1327
               

               
Cow position:
               
chr5:22737854-22738333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
848-1337
               

               
Cow position:
               
chr5:35208014-35208507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
848-1339
               

               
Cow position:
               
chr5:14550837-14550332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 253
               

               
Conread position:
               
848-1340
               

               
Cow position:
               
chr5:55233027-55232576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
849-985
               

               
Cow position:
               
chr5:52269436-52269303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
849-1014
               

               
Cow position:
               
chr5:31604882-31604713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
849-1066
               

               
Cow position:
               
chr5:54869167-54869395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
849-1126
               

               
Cow position:
               
chr5:49558909-49559216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 234
               

               
Conread position:
               
849-1248
               

               
Cow position:
               
chr5:4710394-4709997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
849-1285
               

               
Cow position:
               
chr5:28302990-28302557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 131
               

               
Conread position:
               
850-957
               

               
Cow position:
               
chr5:2288808-2288702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
850-1213
               

               
Cow position:
               
chr5:65588463-65588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
850-1332
               

               
Cow position:
               
chr5:57935362-57934882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
850-1334
               

               
Cow position:
               
chr5:59082441-59081949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
851-1116
               

               
Cow position:
               
chr5:72150000-72150275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
852-1089
               

               
Cow position:
               
chr5:36679687-36679436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
852-1221
               

               
Cow position:
               
chr5:75828981-75828623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
853-1249
               

               
Cow position:
               
chr5:9090269-9089870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
854-982
               

               
Cow position:
               
chr5:13044654-13044528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
854-1088
               

               
Cow position:
               
chr5:27690304-27690057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 113
               

               
Conread position:
               
854-1169
               

               
Cow position:
               
chr5:28926429-28926102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
854-1169
               

               
Cow position:
               
chr5:70102053-70101745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
856-1226
               

               
Cow position:
               
chr5:67243681-67244053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 191
               

               
Conread position:
               
856-1318
               

               
Cow position:
               
chr5:3582346-3582782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
857-1063
               

               
Cow position:
               
chr5:46104178-46103967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
857-1157
               

               
Cow position:
               
chr5:32378625-32378912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
857-1219
               

               
Cow position:
               
chr5:48574005-48573648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
857-1239
               

               
Cow position:
               
chr5:75437139-75436743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
126, 255
               

               
Conread position:
               
857-1243
               

               
Cow position:
               
chr5:49685523-49685127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 255
               

               
Conread position:
               
857-1327
               

               
Cow position:
               
chr5:32975793-32975322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
857-1339
               

               
Cow position:
               
chr5:57074577-57074086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 381
               

               
Conread position:
               
858-1057
               

               
Cow position:
               
chr5:12563247-12563041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
858-1215
               

               
Cow position:
               
chr5:59438926-59439295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 270
               

               
Conread position:
               
858-1288
               

               
Cow position:
               
chr5:68871951-68872392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
859-1013
               

               
Cow position:
               
chr5:34923347-34923192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
859-1016
               

               
Cow position:
               
chr5:57890259-57890413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
859-1028
               

               
Cow position:
               
chr5:20691699-20691534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
859-1036
               

               
Cow position:
               
chr5:24837180-24837002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
859-1039
               

               
Cow position:
               
chr5:6032998-6033187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 100
               

               
Conread position:
               
859-1045
               

               
Cow position:
               
chr5:24642962-24642773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 131
               

               
Conread position:
               
859-1047
               

               
Cow position:
               
chr5:2851074-2851273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
859-1050
               

               
Cow position:
               
chr5:25225889-25225693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
859-1063
               

               
Cow position:
               
chr5:2332754-2332538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 214
               

               
Conread position:
               
859-1081
               

               
Cow position:
               
chr5:40928213-40927990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
859-1095
               

               
Cow position:
               
chr5:34922075-34921832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 220
               

               
Conread position:
               
859-1100
               

               
Cow position:
               
chr5:40357109-40356855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
859-1102
               

               
Cow position:
               
chr5:10789917-10789661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
859-1108
               

               
Cow position:
               
chr5:26046094-26046351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
859-1130
               

               
Cow position:
               
chr5:54713978-54713692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 250
               

               
Conread position:
               
859-1137
               

               
Cow position:
               
chr5:37714145-37713848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
859-1190
               

               
Cow position:
               
chr5:73079972-73080304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
859-1215
               

               
Cow position:
               
chr5:42744557-42744904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
859-1223
               

               
Cow position:
               
chr5:75244530-75244145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 229
               

               
Conread position:
               
859-1226
               

               
Cow position:
               
chr5:37814383-37814761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 161
               

               
Conread position:
               
859-1235
               

               
Cow position:
               
chr5:28229917-28230308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
859-1246
               

               
Cow position:
               
chr5:37646792-37646389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 343
               

               
Conread position:
               
859-1248
               

               
Cow position:
               
chr5:34300685-34301071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr5:27615274-27615667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
859-1249
               

               
Cow position:
               
chr5:43929974-43929580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 282
               

               
Conread position:
               
859-1251
               

               
Cow position:
               
chr5:44994277-44993891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
859-1251
               

               
Cow position:
               
chr5:54311093-54311494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
859-1288
               

               
Cow position:
               
chr5:54350601-54350174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 106
               

               
Conread position:
               
859-1303
               

               
Cow position:
               
chr5:68604619-68605075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
859-1317
               

               
Cow position:
               
chr5:25035467-25035028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 94
               

               
Conread position:
               
859-1319
               

               
Cow position:
               
chr5:53835477-53835949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
859-1331
               

               
Cow position:
               
chr5:47601577-47602048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
859-1335
               

               
Cow position:
               
chr5:55967123-55966627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 234
               

               
Conread position:
               
859-1337
               

               
Cow position:
               
chr5:72903464-72902997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
859-1338
               

               
Cow position:
               
chr5:15363650-15364117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 190
               

               
Conread position:
               
859-1340
               

               
Cow position:
               
chr5:69337592-69338063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
860-974
               

               
Cow position:
               
chr5:35125777-35125891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
860-981
               

               
Cow position:
               
chr5:35151220-35151100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
860-985
               

               
Cow position:
               
chr5:32087960-32087835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
860-985
               

               
Cow position:
               
chr5:35683832-35683957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
860-1085
               

               
Cow position:
               
chr5:51076884-51076652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
860-1116
               

               
Cow position:
               
chr5:30639089-30638838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
860-1122
               

               
Cow position:
               
chr5:34115423-34115684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
860-1123
               

               
Cow position:
               
chr5:694348-694607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
152, 35
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr5:10261476-10261184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
860-1154
               

               
Cow position:
               
chr5:2500420-2500116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
860-1154
               

               
Cow position:
               
chr5:65593642-65593935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
860-1157
               

               
Cow position:
               
chr5:32956331-32956026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
860-1190
               

               
Cow position:
               
chr5:46798013-46798343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
142, 60
               

               
Conread position:
               
860-1199
               

               
Cow position:
               
chr5:43738187-43737855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
860-1216
               

               
Cow position:
               
chr5:58855865-58856227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
860-1227
               

               
Cow position:
               
chr5:51999980-52000354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
860-1231
               

               
Cow position:
               
chr5:46323051-46322663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 253
               

               
Conread position:
               
860-1236
               

               
Cow position:
               
chr5:13536918-13537277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
860-1242
               

               
Cow position:
               
chr5:54086301-54086687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
860-1249
               

               
Cow position:
               
chr5:26477232-26476862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
234, 94
               

               
Conread position:
               
860-1251
               

               
Cow position:
               
chr5:458233-458650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 259
               

               
Conread position:
               
860-1319
               

               
Cow position:
               
chr5:35684695-35685161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 307
               

               
Conread position:
               
860-1326
               

               
Cow position:
               
chr5:58144845-58144369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 241
               

               
Conread position:
               
860-1328
               

               
Cow position:
               
chr5:30844873-30845343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
860-1341
               

               
Cow position:
               
chr5:11668417-11667937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
860-1343
               

               
Cow position:
               
chr5:38832878-38833368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 289
               

               
Conread position:
               
861-1082
               

               
Cow position:
               
chr5:60519928-60520155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
861-1116
               

               
Cow position:
               
chr5:9859956-9859686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
861-1225
               

               
Cow position:
               
chr5:46611328-46610964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
861-1330
               

               
Cow position:
               
chr5:40109263-40109723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
861-1338
               

               
Cow position:
               
chr5:16894014-16893532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 175
               

               
Conread position:
               
862-981
               

               
Cow position:
               
chr5:72605812-72605927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
862-1248
               

               
Cow position:
               
chr5:4032226-4031831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 79
               

               
Conread position:
               
862-1319
               

               
Cow position:
               
chr5:5257535-5257059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 384
               

               
Conread position:
               
862-1320
               

               
Cow position:
               
chr5:53842054-53842520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
862-1331
               

               
Cow position:
               
chr5:25495573-25495112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
863-981
               

               
Cow position:
               
chr5:56201357-56201241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
863-984
               

               
Cow position:
               
chr5:52162363-52162484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
863-1058
               

               
Cow position:
               
chr5:14630144-14629941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
863-1086
               

               
Cow position:
               
chr5:29504876-29505105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
863-1101
               

               
Cow position:
               
chr5:57113744-57113978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
125, 154
               

               
Conread position:
               
863-1132
               

               
Cow position:
               
chr5:54064543-54064817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 206
               

               
Conread position:
               
863-1303
               

               
Cow position:
               
chr5:65776622-65776165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 236
               

               
Conread position:
               
863-1334
               

               
Cow position:
               
chr5:12323039-12322567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 202
               

               
Conread position:
               
864-985
               

               
Cow position:
               
chr5:19905513-19905391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
864-1025
               

               
Cow position:
               
chr5:1460660-1460490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
864-1087
               

               
Cow position:
               
chr5:40595237-40595012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 90
               

               
Conread position:
               
864-1092
               

               
Cow position:
               
chr5:32963864-32963628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
864-1115
               

               
Cow position:
               
chr5:45036785-45037046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
864-1224
               

               
Cow position:
               
chr5:57626574-57626921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
864-1247
               

               
Cow position:
               
chr5:37377643-37378008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
864-1303
               

               
Cow position:
               
chr5:17063329-17062867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 88
               

               
Conread position:
               
864-1305
               

               
Cow position:
               
chr5:29353364-29352918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
864-1315
               

               
Cow position:
               
chr5:30253510-30253964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
865-1248
               

               
Cow position:
               
chr5:43992091-43992479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
865-1334
               

               
Cow position:
               
chr5:24996458-24995979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
866-982
               

               
Cow position:
               
chr5:14703201-14703084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
866-1084
               

               
Cow position:
               
chr5:26099603-26099384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
866-1128
               

               
Cow position:
               
chr5:56135202-56134929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
100, 163
               

               
Conread position:
               
866-1248
               

               
Cow position:
               
chr5:74858340-74858732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
866-1303
               

               
Cow position:
               
chr5:14904300-14903854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
868-1216
               

               
Cow position:
               
chr5:19813443-19813095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
869-1085
               

               
Cow position:
               
chr5:34885386-34885164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 181
               

               
Conread position:
               
869-1210
               

               
Cow position:
               
chr5:32697043-32696704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
869-1223
               

               
Cow position:
               
chr5:27172191-27171861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
869-1330
               

               
Cow position:
               
chr5:56070623-56071094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
869-1331
               

               
Cow position:
               
chr5:72895462-72895929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 143
               

               
Conread position:
               
869-1338
               

               
Cow position:
               
chr5:41303321-41302829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
114, 144
               

               
Conread position:
               
869-1342
               

               
Cow position:
               
chr5:27154792-27155253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
870-985
               

               
Cow position:
               
chr5:22102542-22102427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
870-1028
               

               
Cow position:
               
chr5:28035481-28035646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
870-1043
               

               
Cow position:
               
chr5:66297009-66297189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
870-1074
               

               
Cow position:
               
chr5:54530753-54530961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
117, 154
               

               
Conread position:
               
870-1084
               

               
Cow position:
               
chr5:69773342-69773561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
870-1091
               

               
Cow position:
               
chr5:33467270-33467040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
870-1099
               

               
Cow position:
               
chr5:9430688-9430454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 89
               

               
Conread position:
               
870-1125
               

               
Cow position:
               
chr5:9070718-9070458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
117, 123
               

               
Conread position:
               
870-1129
               

               
Cow position:
               
chr5:72310485-72310741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 144
               

               
Conread position:
               
870-1133
               

               
Cow position:
               
chr5:1779490-1779243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
870-1137
               

               
Cow position:
               
chr5:22815311-22815037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 229
               

               
Conread position:
               
870-1154
               

               
Cow position:
               
chr5:21964062-21964352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
870-1175
               

               
Cow position:
               
chr5:46122578-46122269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
870-1201
               

               
Cow position:
               
chr5:41636644-41636977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
870-1226
               

               
Cow position:
               
chr5:4218648-4218992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 159
               

               
Conread position:
               
870-1226
               

               
Cow position:
               
chr5:6683577-6683232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
870-1246
               

               
Cow position:
               
chr5:36854983-36855359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
870-1246
               

               
Cow position:
               
chr5:67212149-67212513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 126
               

               
Conread position:
               
870-1267
               

               
Cow position:
               
chr5:12709657-12710056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
870-1267
               

               
Cow position:
               
chr5:42777535-42777925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
117, 257
               

               
Conread position:
               
870-1302
               

               
Cow position:
               
chr5:20127825-20128265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
870-1303
               

               
Cow position:
               
chr5:67932690-67932254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
870-1304
               

               
Cow position:
               
chr5:64137022-64137471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
870-1309
               

               
Cow position:
               
chr5:20779609-20779181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
870-1316
               

               
Cow position:
               
chr5:3771617-3772067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 261
               

               
Conread position:
               
870-1316
               

               
Cow position:
               
chr5:11229903-11229446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 223
               

               
Conread position:
               
870-1327
               

               
Cow position:
               
chr5:28324116-28324596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 295
               

               
Conread position:
               
870-1331
               

               
Cow position:
               
chr5:22243014-22242532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
870-1333
               

               
Cow position:
               
chr5:62172189-62172642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 222
               

               
Conread position:
               
870-1335
               

               
Cow position:
               
chr5:6839308-6838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
115, 193
               

               
Conread position:
               
870-1343
               

               
Cow position:
               
chr5:36868516-36868989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 169
               

               
Conread position:
               
871-985
               

               
Cow position:
               
chr5:33977970-33978083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
871-1110
               

               
Cow position:
               
chr5:73252868-73253107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
107, 88
               

               
Conread position:
               
871-1146
               

               
Cow position:
               
chr5:3627396-3627097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 245
               

               
Conread position:
               
871-1226
               

               
Cow position:
               
chr5:72007081-72006730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 213
               

               
Conread position:
               
871-1231
               

               
Cow position:
               
chr5:71454824-71454472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
871-1303
               

               
Cow position:
               
chr5:37064865-37065311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
116, 225
               

               
Conread position:
               
871-1303
               

               
Cow position:
               
chr5:68718655-68719079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
871-1311
               

               
Cow position:
               
chr5:65765340-65764905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
871-1330
               

               
Cow position:
               
chr5:21828636-21829104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 322
               

               
Conread position:
               
871-1334
               

               
Cow position:
               
chr5:16938236-16937791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
872-985
               

               
Cow position:
               
chr5:61455527-61455640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
872-1088
               

               
Cow position:
               
chr5:16668350-16668560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
872-1114
               

               
Cow position:
               
chr5:1766572-1766326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
872-1131
               

               
Cow position:
               
chr5:51490981-51490724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
872-1154
               

               
Cow position:
               
chr5:64823540-64823248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 173
               

               
Conread position:
               
872-1163
               

               
Cow position:
               
chr5:56820487-56820189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
872-1175
               

               
Cow position:
               
chr5:31145005-31144703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
872-1223
               

               
Cow position:
               
chr5:15426301-15426670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
872-1242
               

               
Cow position:
               
chr5:8821239-8820864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
872-1251
               

               
Cow position:
               
chr5:74015713-74016099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
872-1294
               

               
Cow position:
               
chr5:1105098-1104674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 193
               

               
Conread position:
               
872-1304
               

               
Cow position:
               
chr5:37645846-37646288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 204
               

               
Conread position:
               
872-1315
               

               
Cow position:
               
chr5:39447759-39447301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
873-1087
               

               
Cow position:
               
chr5:36793810-36794032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
873-1121
               

               
Cow position:
               
chr5:18090501-18090754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 235
               

               
Conread position:
               
873-1232
               

               
Cow position:
               
chr5:7723446-7723806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
873-1341
               

               
Cow position:
               
chr5:1247050-1247516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 92
               

               
Conread position:
               
874-985
               

               
Cow position:
               
chr5:24933980-24934092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
874-1180
               

               
Cow position:
               
chr5:72172798-72173116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 165
               

               
Conread position:
               
874-1215
               

               
Cow position:
               
chr5:51502787-51503127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
874-1227
               

               
Cow position:
               
chr5:27306093-27306440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
875-1091
               

               
Cow position:
               
chr5:14415549-14415777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
876-1074
               

               
Cow position:
               
chr5:5848410-5848205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
877-985
               

               
Cow position:
               
chr5:62378280-62378386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
877-1332
               

               
Cow position:
               
chr5:56028752-56028303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
878-1203
               

               
Cow position:
               
chr5:48757723-48758052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
878-1224
               

               
Cow position:
               
chr5:15722275-15721941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
878-1341
               

               
Cow position:
               
chr5:16025682-16025233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 179
               

               
Conread position:
               
878-1342
               

               
Cow position:
               
chr5:40152254-40152738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
94, 344
               

               
Conread position:
               
879-980
               

               
Cow position:
               
chr5:15412472-15412573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
879-1105
               

               
Cow position:
               
chr5:31434045-31434275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
879-1337
               

               
Cow position:
               
chr5:2309785-2309312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 232
               

               
Conread position:
               
880-1217
               

               
Cow position:
               
chr5:39442073-39442423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
881-1169
               

               
Cow position:
               
chr5:63964391-63964091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 190
               

               
Conread position:
               
881-1226
               

               
Cow position:
               
chr5:62142452-62142811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 160
               

               
Conread position:
               
881-1317
               

               
Cow position:
               
chr5:7044929-7044480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
882-984
               

               
Cow position:
               
chr5:60183308-60183406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
882-1080
               

               
Cow position:
               
chr5:57271483-57271274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
882-1143
               

               
Cow position:
               
chr5:60126156-60126425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
883-1171
               

               
Cow position:
               
chr5:49362207-49361915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
883-1319
               

               
Cow position:
               
chr5:26262890-26262457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
884-1215
               

               
Cow position:
               
chr5:33537675-33537998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
304, 84
               

               
Conread position:
               
884-1240
               

               
Cow position:
               
chr5:31660856-31660509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
884-1317
               

               
Cow position:
               
chr5:8024407-8023989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
885-1140
               

               
Cow position:
               
chr5:7140319-7140057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
885-1140
               

               
Cow position:
               
chr5:35235923-35235660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 143
               

               
Conread position:
               
886-1224
               

               
Cow position:
               
chr5:45803847-45804193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
886-1294
               

               
Cow position:
               
chr5:6504093-6503673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 165
               

               
Conread position:
               
886-1318
               

               
Cow position:
               
chr5:71158477-71158054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
333, 93
               

               
Conread position:
               
886-1327
               

               
Cow position:
               
chr5:35969329-35969776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 146
               

               
Conread position:
               
887-1192
               

               
Cow position:
               
chr5:68265176-68264857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
887-1243
               

               
Cow position:
               
chr5:39258325-39258656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
887-1337
               

               
Cow position:
               
chr5:3242686-3242251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 200
               

               
Conread position:
               
887-1339
               

               
Cow position:
               
chr5:48154685-48154217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
888-1183
               

               
Cow position:
               
chr5:47547928-47547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
888-1251
               

               
Cow position:
               
chr5:58320673-58320309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
889-1106
               

               
Cow position:
               
chr5:43395348-43395126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
889-1137
               

               
Cow position:
               
chr5:40039981-40039722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
889-1235
               

               
Cow position:
               
chr5:57736904-57737241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
889-1280
               

               
Cow position:
               
chr5:71494606-71495011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 352
               

               
Conread position:
               
889-1318
               

               
Cow position:
               
chr5:18898773-18899183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
890-1185
               

               
Cow position:
               
chr5:29212739-29213032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
890-1325
               

               
Cow position:
               
chr5:71768670-71768274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
891-1227
               

               
Cow position:
               
chr5:64758972-64758632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
891-1344
               

               
Cow position:
               
chr5:4280255-4280695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
892-1298
               

               
Cow position:
               
chr5:41713109-41713495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
892-1337
               

               
Cow position:
               
chr5:51053855-51053400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 206
               

               
Conread position:
               
892-1341
               

               
Cow position:
               
chr5:44049495-44049949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
894-1131
               

               
Cow position:
               
chr5:8994771-8994525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
895-1167
               

               
Cow position:
               
chr5:35449049-35449312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
896-1249
               

               
Cow position:
               
chr5:23169022-23168668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
896-1287
               

               
Cow position:
               
chr5:34977039-34976643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
897-1342
               

               
Cow position:
               
chr5:45409123-45409574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
898-1018
               

               
Cow position:
               
chr5:55950221-55950099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
900-1085
               

               
Cow position:
               
chr5:1027891-1027696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
901-1243
               

               
Cow position:
               
chr5:57575567-57575925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
901-1344
               

               
Cow position:
               
chr5:50943352-50942907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
902-1294
               

               
Cow position:
               
chr5:52040517-52040118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
903-1340
               

               
Cow position:
               
chr5:44447083-44446629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 211
               

               
Conread position:
               
904-1236
               

               
Cow position:
               
chr5:69731322-69731643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
904-1333
               

               
Cow position:
               
chr5:34561813-34562249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 339
               

               
Conread position:
               
905-1153
               

               
Cow position:
               
chr5:1678204-1678454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
905-1191
               

               
Cow position:
               
chr5:8163018-8162717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
53, 203
               

               
Conread position:
               
906-1236
               

               
Cow position:
               
chr5:22643411-22643087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
907-1224
               

               
Cow position:
               
chr5:74003820-74003502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
908-1320
               

               
Cow position:
               
chr5:74610883-74610471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
909-1248
               

               
Cow position:
               
chr5:4220790-4221136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 194
               

               
Conread position:
               
909-1318
               

               
Cow position:
               
chr5:5855689-5856087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 56
               

               
Conread position:
               
909-1337
               

               
Cow position:
               
chr5:69461144-69461590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
909-1338
               

               
Cow position:
               
chr5:4322220-4322661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
909-1341
               

               
Cow position:
               
chr5:17371891-17371442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
910-1216
               

               
Cow position:
               
chr5:48010036-48009734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
910-1271
               

               
Cow position:
               
chr5:7755742-7755383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
910-1344
               

               
Cow position:
               
chr5:57591501-57591937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
913-1117
               

               
Cow position:
               
chr5:17644842-17644628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
914-1332
               

               
Cow position:
               
chr5:52667844-52668280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
915-1164
               

               
Cow position:
               
chr5:6670382-6670120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
915-1249
               

               
Cow position:
               
chr5:61810608-61810927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
915-1344
               

               
Cow position:
               
chr5:46512951-46512515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
916-1236
               

               
Cow position:
               
chr5:37808848-37808520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
916-1329
               

               
Cow position:
               
chr5:34624785-34625187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 115
               

               
Conread position:
               
917-1203
               

               
Cow position:
               
chr5:55928760-55929056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
917-1299
               

               
Cow position:
               
chr5:17768326-17767945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
919-1243
               

               
Cow position:
               
chr5:14629996-14629655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
921-1288
               

               
Cow position:
               
chr5:65136105-65136456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
921-1324
               

               
Cow position:
               
chr5:44028480-44028073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
922-1224
               

               
Cow position:
               
chr5:6286604-6286300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
923-1318
               

               
Cow position:
               
chr5:31217235-31216826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
923-1344
               

               
Cow position:
               
chr5:57266074-57265648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
924-1186
               

               
Cow position:
               
chr5:69520715-69520986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
924-1225
               

               
Cow position:
               
chr5:62638730-62639038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 180
               

               
Conread position:
               
924-1287
               

               
Cow position:
               
chr5:45472090-45472475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 315
               

               
Conread position:
               
926-1344
               

               
Cow position:
               
chr5:3549951-3549552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
929-1236
               

               
Cow position:
               
chr5:56317124-56317432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
929-1340
               

               
Cow position:
               
chr5:41010167-41009761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
930-1302
               

               
Cow position:
               
chr5:74580623-74580997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
931-1246
               

               
Cow position:
               
chr5:30950088-30949762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
932-1304
               

               
Cow position:
               
chr5:64697613-64698001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
932-1325
               

               
Cow position:
               
chr5:30178678-30178268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
932-1333
               

               
Cow position:
               
chr5:56014567-56014964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
933-1250
               

               
Cow position:
               
chr5:59115214-59115540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
933-1322
               

               
Cow position:
               
chr5:30629324-30628922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
934-1287
               

               
Cow position:
               
chr5:65967897-65967537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
934-1303
               

               
Cow position:
               
chr5:55955740-55956122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
936-1249
               

               
Cow position:
               
chr5:54060110-54060432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 216
               

               
Conread position:
               
937-1318
               

               
Cow position:
               
chr5:57768135-57767761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
939-1241
               

               
Cow position:
               
chr5:46426011-46425706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
939-1292
               

               
Cow position:
               
chr5:45397418-45397768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
939-1338
               

               
Cow position:
               
chr5:35247271-35246861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
939-1344
               

               
Cow position:
               
chr5:66581803-66582223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
943-1325
               

               
Cow position:
               
chr5:42050391-42050778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 188
               

               
Conread position:
               
944-1303
               

               
Cow position:
               
chr5:47696598-47696248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
944-1304
               

               
Cow position:
               
chr5:12673620-12673267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
944-1317
               

               
Cow position:
               
chr5:54048504-54048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
944-1343
               

               
Cow position:
               
chr5:20843531-20843146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
948-1251
               

               
Cow position:
               
chr5:7697862-7698158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
955-1291
               

               
Cow position:
               
chr5:61006936-61007267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
955-1335
               

               
Cow position:
               
chr5:49919782-49920167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
963-1245
               

               
Cow position:
               
chr5:45574487-45574772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
963-1247
               

               
Cow position:
               
chr5:20422319-20422035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
968-1330
               

               
Cow position:
               
chr5:73168133-73167774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
973-1183
               

               
Cow position:
               
chr5:37893214-37893426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
973-1339
               

               
Cow position:
               
chr5:33560854-33560490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
975-1333
               

               
Cow position:
               
chr5:60016049-60016401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 184
               

               
Conread position:
               
976-1300
               

               
Cow position:
               
chr5:64168357-64168028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
976-1330
               

               
Cow position:
               
chr5:49474662-49474313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
978-1248
               

               
Cow position:
               
chr5:54768025-54767754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
979-1167
               

               
Cow position:
               
chr5:38647244-38647430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
979-1243
               

               
Cow position:
               
chr5:54375619-54375352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
979-1243
               

               
Cow position:
               
chr5:63865681-63865958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 175
               

               
Conread position:
               
979-1248
               

               
Cow position:
               
chr5:64592206-64591938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
979-1249
               

               
Cow position:
               
chr5:44726440-44726179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
979-1294
               

               
Cow position:
               
chr5:64027122-64026812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
979-1327
               

               
Cow position:
               
chr5:70951990-70951656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
979-1330
               

               
Cow position:
               
chr5:12557403-12557048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
979-1334
               

               
Cow position:
               
chr5:18289015-18289362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
982-1325
               

               
Cow position:
               
chr5:64140420-64140772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
984-1203
               

               
Cow position:
               
chr5:56635792-56636007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
985-1245
               

               
Cow position:
               
chr5:49440979-49440724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 227
               

               
Conread position:
               
985-1246
               

               
Cow position:
               
chr5:23678811-23678550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 176
               

               
Conread position:
               
985-1246
               

               
Cow position:
               
chr5:45273608-45273351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
985-1246
               

               
Cow position:
               
chr5:60599292-60599050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
985-1251
               

               
Cow position:
               
chr5:58446696-58446966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
985-1275
               

               
Cow position:
               
chr5:60183694-60183984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 248
               

               
Conread position:
               
985-1299
               

               
Cow position:
               
chr5:12434428-12434743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
985-1312
               

               
Cow position:
               
chr5:22666986-22667291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
985-1321
               

               
Cow position:
               
chr5:12901808-12902149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
985-1327
               

               
Cow position:
               
chr5:32339071-32338725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 124
               

               
Conread position:
               
985-1327
               

               
Cow position:
               
chr5:42670963-42670637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
985-1332
               

               
Cow position:
               
chr5:991359-991715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
985-1343
               

               
Cow position:
               
chr5:43371305-43370941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
985-1343
               

               
Cow position:
               
chr5:54750729-54751065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
987-1224
               

               
Cow position:
               
chr5:72951736-72951977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
987-1312
               

               
Cow position:
               
chr5:56877383-56877691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
987-1324
               

               
Cow position:
               
chr5:14921035-14920693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
990-1293
               

               
Cow position:
               
chr5:60175367-60175689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
990-1344
               

               
Cow position:
               
chr5:36039106-36038750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
991-1308
               

               
Cow position:
               
chr5:53946794-53947116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
992-1244
               

               
Cow position:
               
chr5:35125953-35126206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 217
               

               
Conread position:
               
992-1248
               

               
Cow position:
               
chr5:73418382-73418134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
994-1334
               

               
Cow position:
               
chr5:33833947-33834281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
995-1295
               

               
Cow position:
               
chr5:57419889-57419592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
995-1317
               

               
Cow position:
               
chr5:56548481-56548792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
995-1332
               

               
Cow position:
               
chr5:30232802-30233150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 212
               

               
Conread position:
               
997-1246
               

               
Cow position:
               
chr5:62378696-62378933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
997-1340
               

               
Cow position:
               
chr5:25365994-25366351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 222
               

               
Conread position:
               
1000-1203
               

               
Cow position:
               
chr5:65883865-65883660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1000-1226
               

               
Cow position:
               
chr5:35976429-35976645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1000-1249
               

               
Cow position:
               
chr5:19523808-19524060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
1000-1252
               

               
Cow position:
               
chr5:14473505-14473240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1000-1303
               

               
Cow position:
               
chr5:71846012-71845714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
1000-1317
               

               
Cow position:
               
chr5:31475592-31475910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
1000-1317
               

               
Cow position:
               
chr5:57101866-57101571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
1000-1318
               

               
Cow position:
               
chr5:71015972-71015658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
1000-1327
               

               
Cow position:
               
chr5:59384782-59384447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
1002-1303
               

               
Cow position:
               
chr5:57527008-57526715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
1007-1315
               

               
Cow position:
               
chr5:12761197-12760896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
227, 58
               

               
Conread position:
               
1007-1319
               

               
Cow position:
               
chr5:7057485-7057169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
1009-1317
               

               
Cow position:
               
chr5:43402817-43403135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1010-1249
               

               
Cow position:
               
chr5:55019213-55019451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
1010-1303
               

               
Cow position:
               
chr5:17555113-17554823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
1010-1335
               

               
Cow position:
               
chr5:29097285-29097606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
1011-1303
               

               
Cow position:
               
chr5:66551980-66551680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1012-1334
               

               
Cow position:
               
chr5:61914490-61914811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
1013-1242
               

               
Cow position:
               
chr5:69636156-69636377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
1013-1319
               

               
Cow position:
               
chr5:19752226-19752529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
1014-1251
               

               
Cow position:
               
chr5:29912341-29912581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
137, 189
               

               
Conread position:
               
1018-1344
               

               
Cow position:
               
chr5:65883703-65883371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 192
               

               
Conread position:
               
1020-1338
               

               
Cow position:
               
chr5:6439105-6438778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
1021-1299
               

               
Cow position:
               
chr5:34109130-34108849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
1021-1303
               

               
Cow position:
               
chr5:63234897-63234611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
1024-1332
               

               
Cow position:
               
chr5:14345163-14344854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
1025-1228
               

               
Cow position:
               
chr5:26150488-26150285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
1028-1282
               

               
Cow position:
               
chr5:17602263-17602014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
1030-1319
               

               
Cow position:
               
chr5:59627036-59626744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
1030-1336
               

               
Cow position:
               
chr5:41935713-41935409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
1033-1337
               

               
Cow position:
               
chr5:63627584-63627294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
1034-1341
               

               
Cow position:
               
chr5:63240918-63241227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
1038-1236
               

               
Cow position:
               
chr5:35982793-35982592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1039-1249
               

               
Cow position:
               
chr5:56339071-56338865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1039-1288
               

               
Cow position:
               
chr5:55796014-55795773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
1039-1316
               

               
Cow position:
               
chr5:20288314-20288033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
1039-1336
               

               
Cow position:
               
chr5:37090690-37090389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
1039-1343
               

               
Cow position:
               
chr5:59395606-59395918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
1040-1242
               

               
Cow position:
               
chr5:63150219-63150019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
1043-1304
               

               
Cow position:
               
chr5:72006540-72006284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 185
               

               
Conread position:
               
1043-1320
               

               
Cow position:
               
chr5:63192789-63192525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
1044-1249
               

               
Cow position:
               
chr5:67118372-67118578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1044-1251
               

               
Cow position:
               
chr5:24136667-24136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
1044-1295
               

               
Cow position:
               
chr5:61784774-61784521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
172, 160
               

               
Conread position:
               
1044-1343
               

               
Cow position:
               
chr5:74658617-74658915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
186, 130
               

               
Conread position:
               
1045-1226
               

               
Cow position:
               
chr5:56517057-56517239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
1045-1325
               

               
Cow position:
               
chr5:37255383-37255099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1045-1343
               

               
Cow position:
               
chr5:52001666-52001372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
1047-1316
               

               
Cow position:
               
chr5:69099675-69099944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
1049-1298
               

               
Cow position:
               
chr5:49501868-49501611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
1049-1323
               

               
Cow position:
               
chr5:49342090-49341802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
1052-1224
               

               
Cow position:
               
chr5:61102676-61102849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
1053-1309
               

               
Cow position:
               
chr5:66466281-66466531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
1054-1248
               

               
Cow position:
               
chr5:24069362-24069544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
1054-1287
               

               
Cow position:
               
chr5:71724264-71724485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
1054-1319
               

               
Cow position:
               
chr5:57101562-57101298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
1055-1319
               

               
Cow position:
               
chr5:22795178-22795434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
1055-1332
               

               
Cow position:
               
chr5:30247555-30247284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
181, 36
               

               
Conread position:
               
1055-1338
               

               
Cow position:
               
chr5:50101413-50101132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
1055-1338
               

               
Cow position:
               
chr5:57686776-57686500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 176
               

               
Conread position:
               
1058-1319
               

               
Cow position:
               
chr5:31052353-31052616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
1058-1327
               

               
Cow position:
               
chr5:8736322-8736041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
1058-1336
               

               
Cow position:
               
chr5:73253383-73253650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1058-1338
               

               
Cow position:
               
chr5:62811791-62812074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
181, 146
               

               
Conread position:
               
1058-1339
               

               
Cow position:
               
chr5:26549174-26548896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
1065-1246
               

               
Cow position:
               
chr5:57230365-57230184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
1068-1330
               

               
Cow position:
               
chr5:45187142-45186876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
1074-1327
               

               
Cow position:
               
chr5:52137920-52138174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
1077-1249
               

               
Cow position:
               
chr5:9170593-9170430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1077-1326
               

               
Cow position:
               
chr5:17104839-17105080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1080-1313
               

               
Cow position:
               
chr5:60523722-60523949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
1081-1247
               

               
Cow position:
               
chr5:9233999-9233832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 148
               

               
Conread position:
               
1081-1321
               

               
Cow position:
               
chr5:46541065-46540830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
1081-1341
               

               
Cow position:
               
chr5:56613573-56613314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 8
               

               
Conread position:
               
1082-1313
               

               
Cow position:
               
chr5:4267662-4267882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1083-1275
               

               
Cow position:
               
chr5:11289401-11289204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
1083-1313
               

               
Cow position:
               
chr5:69383247-69383473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1083-1335
               

               
Cow position:
               
chr5:33273689-33273941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
1083-1342
               

               
Cow position:
               
chr5:17835164-17834909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
1087-1340
               

               
Cow position:
               
chr5:61049328-61049581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 118
               

               
Conread position:
               
1087-1342
               

               
Cow position:
               
chr5:52852967-52853216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 118
               

               
Conread position:
               
1088-1283
               

               
Cow position:
               
chr5:17605137-17604944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 142
               

               
Conread position:
               
1092-1330
               

               
Cow position:
               
chr5:36142988-36143216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1093-1338
               

               
Cow position:
               
chr5:67634515-67634261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1094-1342
               

               
Cow position:
               
chr5:60515025-60514774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 86
               

               
Conread position:
               
1095-1319
               

               
Cow position:
               
chr5:51298709-51298487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
1101-1286
               

               
Cow position:
               
chr5:51247121-51246937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
1101-1318
               

               
Cow position:
               
chr5:60948143-60948359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
1101-1338
               

               
Cow position:
               
chr5:17828469-17828230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1102-1243
               

               
Cow position:
               
chr5:35647354-35647495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1102-1291
               

               
Cow position:
               
chr5:38168905-38169093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
1102-1338
               

               
Cow position:
               
chr5:7177162-7177399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
112, 103
               

               
Conread position:
               
1103-1295
               

               
Cow position:
               
chr5:46704287-46704096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1103-1339
               

               
Cow position:
               
chr5:52137042-52136804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1104-1339
               

               
Cow position:
               
chr5:2240976-2240739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
1107-1242
               

               
Cow position:
               
chr5:5847829-5847697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1107-1338
               

               
Cow position:
               
chr5:26167437-26167666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1108-1327
               

               
Cow position:
               
chr5:26147609-26147826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
207, 7
               

               
Conread position:
               
1109-1327
               

               
Cow position:
               
chr5:54312619-54312834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 119
               

               
Conread position:
               
1113-1336
               

               
Cow position:
               
chr5:35190132-35190351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1114-1316
               

               
Cow position:
               
chr5:37842256-37842054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 111
               

               
Conread position:
               
1114-1334
               

               
Cow position:
               
chr5:51289568-51289357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
205, 42
               

               
Conread position:
               
1117-1317
               

               
Cow position:
               
chr5:34288224-34288028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1119-1334
               

               
Cow position:
               
chr5:54127317-54127530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
1119-1335
               

               
Cow position:
               
chr5:1694060-1693848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1120-1303
               

               
Cow position:
               
chr5:16668726-16668905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1120-1312
               

               
Cow position:
               
chr5:44734696-44734506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1120-1319
               

               
Cow position:
               
chr5:6086314-6086113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1120-1339
               

               
Cow position:
               
chr5:49821457-49821679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1122-1327
               

               
Cow position:
               
chr5:15991608-15991407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
197, 83
               

               
Conread position:
               
1126-1327
               

               
Cow position:
               
chr5:30221743-30221541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
1127-1317
               

               
Cow position:
               
chr5:74887864-74887673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
1128-1326
               

               
Cow position:
               
chr5:57497387-57497191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1128-1330
               

               
Cow position:
               
chr5:12562723-12562520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
1129-1321
               

               
Cow position:
               
chr5:35394395-35394209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1129-1332
               

               
Cow position:
               
chr5:3817649-3817441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
1133-1319
               

               
Cow position:
               
chr5:6876926-6876737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
1139-1337
               

               
Cow position:
               
chr5:43465573-43465775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
1140-1327
               

               
Cow position:
               
chr5:37253477-37253660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
1141-1329
               

               
Cow position:
               
chr5:29895221-29895411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
1144-1327
               

               
Cow position:
               
chr5:29599493-29599316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1144-1327
               

               
Cow position:
               
chr5:49207274-49207092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
175, 84
               

               
Conread position:
               
1144-1328
               

               
Cow position:
               
chr5:52192376-52192201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1144-1335
               

               
Cow position:
               
chr5:34918399-34918585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1147-1335
               

               
Cow position:
               
chr5:25462145-25462328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 5
               

               
Conread position:
               
1148-1336
               

               
Cow position:
               
chr5:21721413-21721231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1338
               

               
Cow position:
               
chr5:58401626-58401810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1152-1303
               

               
Cow position:
               
chr5:66287006-66287154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1152-1319
               

               
Cow position:
               
chr5:34787635-34787800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1157-1299
               

               
Cow position:
               
chr5:52849151-52849289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1157-1319
               

               
Cow position:
               
chr5:6245597-6245437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1157-1331
               

               
Cow position:
               
chr5:5030509-5030679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1157-1344
               

               
Cow position:
               
chr5:67339949-67340131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1158-1341
               

               
Cow position:
               
chr5:63300145-63300327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
1160-1341
               

               
Cow position:
               
chr5:32975827-32976014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
1161-1337
               

               
Cow position:
               
chr5:47960191-47960020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1165-1342
               

               
Cow position:
               
chr5:56624443-56624264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
1166-1319
               

               
Cow position:
               
chr5:64061094-64061241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1166-1343
               

               
Cow position:
               
chr5:19626653-19626829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
1168-1319
               

               
Cow position:
               
chr5:34639199-34639352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1168-1339
               

               
Cow position:
               
chr5:47335105-47335274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
1174-1317
               

               
Cow position:
               
chr5:18578975-18579115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
1177-1335
               

               
Cow position:
               
chr5:74049910-74050068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1178-1319
               

               
Cow position:
               
chr5:48104348-48104488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
1199-1335
               

               
Cow position:
               
chr5:21237783-21237649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
1200-1327
               

               
Cow position:
               
chr5:20407366-20407238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1201-1334
               

               
Cow position:
               
chr5:8149196-8149066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.