Cow genome map

Conread name: Ss1.1-Pig4-TMW8044K22.5.5

Conread position: 812-1137
Cow position: chrX:14463028-14463364 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 15

Conread position: 822-1118
Cow position: chrX:48370823-48371119 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 89, 5

Conread position: 827-935
Cow position: chrX:9771103-9770995 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1315
Cow position: chrX:27509290-27508798 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 9

Conread position: 828-981
Cow position: chrX:30919661-30919509 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 828-1107
Cow position: chrX:45903909-45904199 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 15

Conread position: 828-1234
Cow position: chrX:23583289-23583705 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 15

Conread position: 828-1318
Cow position: chrX:40183619-40183125 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 15

Conread position: 828-1321
Cow position: chrX:31250122-31250622 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 71

Conread position: 829-1143
Cow position: chrX:39549062-39549377 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 14

Conread position: 829-1249
Cow position: chrX:38227359-38226951 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 148, 132

Conread position: 829-1343
Cow position: chrX:27206545-27207045 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 350
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 9, 93

Conread position: 830-1014
Cow position: chrX:46990057-46989867 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 830-1226
Cow position: chrX:10412253-10411848 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 13

Conread position: 830-1246
Cow position: chrX:34401730-34402164 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 11

Conread position: 831-982
Cow position: chrX:39347052-39346902 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 12

Conread position: 831-991
Cow position: chrX:32747392-32747553 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 12

Conread position: 831-1006
Cow position: chrX:16853655-16853482 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 12

Conread position: 831-1047
Cow position: chrX:7806111-7806338 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 12

Conread position: 831-1085
Cow position: chrX:21665860-21665597 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 64

Conread position: 831-1095
Cow position: chrX:19290506-19290767 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 12

Conread position: 831-1097
Cow position: chrX:35409402-35409668 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 12

Conread position: 831-1120
Cow position: chrX:3653497-3653791 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 142, 12

Conread position: 831-1137
Cow position: chrX:14458433-14458123 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 142, 12

Conread position: 831-1186
Cow position: chrX:26441047-26440689 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 257

Conread position: 831-1216
Cow position: chrX:9161322-9161701 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 12

Conread position: 831-1339
Cow position: chrX:25816165-25815650 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 130

Conread position: 831-1339
Cow position: chrX:41879197-41878688 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 12

Conread position: 832-981
Cow position: chrX:21861941-21861791 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 128

Conread position: 832-1203
Cow position: chrX:38936433-38936813 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 68

Conread position: 832-1319
Cow position: chrX:23497929-23497467 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 832-1327
Cow position: chrX:32020388-32019895 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 255

Conread position: 832-1339
Cow position: chrX:27705327-27705836 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 68

Conread position: 833-958
Cow position: chrX:2351798-2351922 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 833-1106
Cow position: chrX:15577905-15577621 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 154, 10

Conread position: 833-1128
Cow position: chrX:22772391-22772697 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 154, 10

Conread position: 833-1165
Cow position: chrX:35533587-35533931 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 151, 10

Conread position: 833-1177
Cow position: chrX:48800273-48800625 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 154, 10

Conread position: 833-1244
Cow position: chrX:24424657-24424249 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 8

Conread position: 834-985
Cow position: chrX:42587692-42587543 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 834-1082
Cow position: chrX:35388171-35387909 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 834-1114
Cow position: chrX:17497832-17498109 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 211, 131

Conread position: 834-1116
Cow position: chrX:36250126-36249835 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 247

Conread position: 834-1130
Cow position: chrX:28157221-28157538 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 204

Conread position: 834-1203
Cow position: chrX:45404098-45403712 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 292

Conread position: 834-1203
Cow position: chrX:46723005-46722621 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 254

Conread position: 834-1242
Cow position: chrX:29289312-29289728 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 199

Conread position: 834-1278
Cow position: chrX:34754456-34753985 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 394

Conread position: 834-1299
Cow position: chrX:34238457-34238933 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 317
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 130, 62

Conread position: 834-1304
Cow position: chrX:47344030-47344514 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 834-1331
Cow position: chrX:25035652-25035141 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 62

Conread position: 834-1339
Cow position: chrX:41238627-41238112 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 62

Conread position: 834-1342
Cow position: chrX:33466353-33466875 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 835-1098
Cow position: chrX:27105996-27106271 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 152, 8

Conread position: 835-1320
Cow position: chrX:38094787-38094295 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 8

Conread position: 836-1190
Cow position: chrX:17541702-17542063 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 59

Conread position: 836-1249
Cow position: chrX:14599271-14599687 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 837-1137
Cow position: chrX:10123604-10123306 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 17

Conread position: 837-1302
Cow position: chrX:1616312-1615845 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 325

Conread position: 838-1137
Cow position: chrX:2576204-2575897 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 146, 32

Conread position: 838-1186
Cow position: chrX:27680144-27680494 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 19

Conread position: 839-1007
Cow position: chrX:26619622-26619459 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 840-1126
Cow position: chrX:41743654-41743950 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 56

Conread position: 840-1237
Cow position: chrX:41733442-41733052 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 253
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 294, 41

Conread position: 841-1126
Cow position: chrX:45412913-45412625 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 188

Conread position: 841-1140
Cow position: chrX:15139803-15139497 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 67

Conread position: 841-1150
Cow position: chrX:7718595-7718909 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 245

Conread position: 841-1172
Cow position: chrX:38072028-38071684 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 133, 238

Conread position: 841-1174
Cow position: chrX:18293675-18294002 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 54

Conread position: 841-1189
Cow position: chrX:39546230-39545880 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 60

Conread position: 841-1192
Cow position: chrX:7496988-7497344 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 48

Conread position: 841-1216
Cow position: chrX:19689961-19690341 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 146, 54

Conread position: 841-1294
Cow position: chrX:28632739-28632277 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 298
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 103

Conread position: 841-1320
Cow position: chrX:3654347-3654834 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 315
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 146, 262

Conread position: 842-957
Cow position: chrX:45955925-45956039 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 842-965
Cow position: chrX:29723195-29723315 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 842-973
Cow position: chrX:12096503-12096375 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 842-978
Cow position: chrX:45410298-45410158 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 842-980
Cow position: chrX:33205248-33205114 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 842-981
Cow position: chrX:12018019-12018155 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 842-981
Cow position: chrX:22811630-22811768 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 842-981
Cow position: chrX:24102723-24102862 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 842-981
Cow position: chrX:27458999-27459139 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 842-981
Cow position: chrX:45420931-45420790 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 842-981
Cow position: chrX:47247165-47247030 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 842-982
Cow position: chrX:34333456-34333316 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 842-983
Cow position: chrX:31556754-31556613 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 842-984
Cow position: chrX:6012363-6012221 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 95

Conread position: 842-984
Cow position: chrX:9651301-9651160 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 842-985
Cow position: chrX:6659117-6659259 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 842-985
Cow position: chrX:32871042-32870900 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 842-985
Cow position: chrX:32978513-32978370 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 99

Conread position: 842-985
Cow position: chrX:37299340-37299483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 57

Conread position: 842-985
Cow position: chrX:41192434-41192569 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 842-985
Cow position: chrX:45043302-45043445 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 43

Conread position: 842-989
Cow position: chrX:45959316-45959168 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 124

Conread position: 842-990
Cow position: chrX:16531743-16531892 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 52

Conread position: 842-1001
Cow position: chrX:25283400-25283240 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 138, 29

Conread position: 842-1004
Cow position: chrX:2523986-2523824 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 842-1005
Cow position: chrX:39699070-39699232 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 117

Conread position: 842-1006
Cow position: chrX:41846790-41846624 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 149, 0

Conread position: 842-1008
Cow position: chrX:26759825-26759662 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 0

Conread position: 842-1008
Cow position: chrX:27627099-27627262 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 842-1008
Cow position: chrX:42165819-42165982 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 842-1013
Cow position: chrX:10916498-10916671 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 103

Conread position: 842-1043
Cow position: chrX:23061198-23061398 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 140, 53

Conread position: 842-1053
Cow position: chrX:4123579-4123802 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 123

Conread position: 842-1067
Cow position: chrX:23280750-23280986 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 141, 0

Conread position: 842-1072
Cow position: chrX:33020230-33020467 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 122, 53

Conread position: 842-1085
Cow position: chrX:31473266-31473504 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 145

Conread position: 842-1085
Cow position: chrX:40452469-40452214 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 145, 245

Conread position: 842-1088
Cow position: chrX:16722058-16721805 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 135, 186

Conread position: 842-1088
Cow position: chrX:27095863-27096111 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 131, 96

Conread position: 842-1089
Cow position: chrX:4905245-4904989 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 238

Conread position: 842-1089
Cow position: chrX:17271545-17271290 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 145, 241

Conread position: 842-1089
Cow position: chrX:20878019-20877761 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 240

Conread position: 842-1089
Cow position: chrX:35240608-35240863 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 145, 239

Conread position: 842-1090
Cow position: chrX:10415782-10415545 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 170, 141

Conread position: 842-1090
Cow position: chrX:19188680-19188940 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 138, 0

Conread position: 842-1090
Cow position: chrX:22493751-22494010 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 240

Conread position: 842-1097
Cow position: chrX:35609730-35609999 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 0

Conread position: 842-1098
Cow position: chrX:48205169-48204909 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 173

Conread position: 842-1099
Cow position: chrX:39704448-39704707 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 35

Conread position: 842-1107
Cow position: chrX:828635-828908 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 145, 258

Conread position: 842-1107
Cow position: chrX:6655523-6655247 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 145, 241

Conread position: 842-1107
Cow position: chrX:12466239-12466514 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 102

Conread position: 842-1107
Cow position: chrX:14152471-14152201 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 153, 141

Conread position: 842-1107
Cow position: chrX:14846330-14846053 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 262

Conread position: 842-1107
Cow position: chrX:16783238-16783508 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 128, 55

Conread position: 842-1107
Cow position: chrX:21833629-21833908 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 145, 243

Conread position: 842-1107
Cow position: chrX:32010775-32011052 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 145, 262

Conread position: 842-1107
Cow position: chrX:42591469-42591748 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 842-1107
Cow position: chrX:46425009-46424733 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 68

Conread position: 842-1111
Cow position: chrX:14924744-14925022 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 122, 76

Conread position: 842-1111
Cow position: chrX:20582774-20583043 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 204

Conread position: 842-1116
Cow position: chrX:10095770-10096058 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 155, 0

Conread position: 842-1116
Cow position: chrX:16289818-16289532 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 241

Conread position: 842-1116
Cow position: chrX:18451335-18451061 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 160, 141

Conread position: 842-1117
Cow position: chrX:21062960-21063245 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 223

Conread position: 842-1123
Cow position: chrX:38439217-38439514 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 842-1126
Cow position: chrX:19015186-19015473 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 108

Conread position: 842-1128
Cow position: chrX:16279393-16279691 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 262

Conread position: 842-1128
Cow position: chrX:30837117-30837405 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 148, 141

Conread position: 842-1128
Cow position: chrX:47608158-47608455 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 212

Conread position: 842-1130
Cow position: chrX:25237922-25238219 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 117, 31

Conread position: 842-1130
Cow position: chrX:40647722-40648026 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 53

Conread position: 842-1130
Cow position: chrX:42994358-42994653 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 93

Conread position: 842-1131
Cow position: chrX:46382032-46381736 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 139, 213

Conread position: 842-1131
Cow position: chrX:47379723-47379426 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 144, 112

Conread position: 842-1136
Cow position: chrX:27516277-27516576 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 124, 15

Conread position: 842-1137
Cow position: chrX:5123617-5123310 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 142, 260

Conread position: 842-1137
Cow position: chrX:28105666-28105965 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 28

Conread position: 842-1137
Cow position: chrX:40591430-40591727 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 252

Conread position: 842-1138
Cow position: chrX:22538210-22537904 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 243

Conread position: 842-1140
Cow position: chrX:28845588-28845883 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 56

Conread position: 842-1140
Cow position: chrX:48243708-48243416 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 137, 98

Conread position: 842-1143
Cow position: chrX:42462004-42461691 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 262

Conread position: 842-1145
Cow position: chrX:34990785-34991091 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 64

Conread position: 842-1146
Cow position: chrX:30197041-30197357 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 262

Conread position: 842-1146
Cow position: chrX:42874722-42875039 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 53

Conread position: 842-1155
Cow position: chrX:30162741-30163065 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 53

Conread position: 842-1165
Cow position: chrX:13971483-13971147 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 142, 262

Conread position: 842-1168
Cow position: chrX:24105370-24105702 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 207

Conread position: 842-1180
Cow position: chrX:37416331-37415982 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 135, 261

Conread position: 842-1182
Cow position: chrX:21255781-21256109 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 842-1183
Cow position: chrX:37843464-37843810 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 117, 241

Conread position: 842-1189
Cow position: chrX:47144826-47145184 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 251

Conread position: 842-1190
Cow position: chrX:2467624-2467984 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 21

Conread position: 842-1201
Cow position: chrX:27498512-27498883 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 238
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 255

Conread position: 842-1202
Cow position: chrX:14221827-14222187 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 39

Conread position: 842-1203
Cow position: chrX:47967344-47967720 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 131, 20

Conread position: 842-1203
Cow position: chrX:48195297-48194922 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 124, 268

Conread position: 842-1214
Cow position: chrX:45089181-45089568 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 85

Conread position: 842-1216
Cow position: chrX:7571650-7572032 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 166

Conread position: 842-1221
Cow position: chrX:35413374-35413741 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 118

Conread position: 842-1221
Cow position: chrX:42470193-42469810 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 842-1224
Cow position: chrX:35224046-35224431 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 53

Conread position: 842-1226
Cow position: chrX:11082869-11082486 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 117, 53

Conread position: 842-1226
Cow position: chrX:30543538-30543148 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 141, 39

Conread position: 842-1226
Cow position: chrX:41122816-41123195 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 53

Conread position: 842-1231
Cow position: chrX:25337921-25338328 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 360

Conread position: 842-1236
Cow position: chrX:43527247-43527652 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 262

Conread position: 842-1243
Cow position: chrX:11614465-11614847 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 152, 90

Conread position: 842-1245
Cow position: chrX:40557932-40557523 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 112

Conread position: 842-1246
Cow position: chrX:31373318-31373692 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 372, 53

Conread position: 842-1249
Cow position: chrX:5017662-5017262 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Conread position: 842-1249
Cow position: chrX:11718036-11717626 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 54

Conread position: 842-1249
Cow position: chrX:17725722-17726133 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 53

Conread position: 842-1249
Cow position: chrX:18695177-18694771 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 166

Conread position: 842-1249
Cow position: chrX:36311343-36311725 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 265
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 43

Conread position: 842-1249
Cow position: chrX:40269220-40269651 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 842-1252
Cow position: chrX:38007024-38006608 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 88

Conread position: 842-1253
Cow position: chrX:45414556-45414146 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 246

Conread position: 842-1256
Cow position: chrX:15329397-15329810 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 266
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 53

Conread position: 842-1278
Cow position: chrX:45373548-45373094 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 298
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 145, 77

Conread position: 842-1288
Cow position: chrX:1055644-1055182 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 54

Conread position: 842-1294
Cow position: chrX:8899768-8900224 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 259

Conread position: 842-1295
Cow position: chrX:47211106-47210630 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 313
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 383

Conread position: 842-1298
Cow position: chrX:31294796-31294360 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 17

Conread position: 842-1299
Cow position: chrX:8730823-8731304 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 333

Conread position: 842-1303
Cow position: chrX:10831768-10831267 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 338
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 400

Conread position: 842-1303
Cow position: chrX:15596782-15597242 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 53

Conread position: 842-1303
Cow position: chrX:20151594-20152062 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 144

Conread position: 842-1309
Cow position: chrX:31436224-31436689 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 125

Conread position: 842-1309
Cow position: chrX:35273088-35273592 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 207

Conread position: 842-1313
Cow position: chrX:22482945-22482465 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 214

Conread position: 842-1317
Cow position: chrX:31443077-31442611 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 53

Conread position: 842-1318
Cow position: chrX:4633108-4632625 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 242

Conread position: 842-1318
Cow position: chrX:15007407-15006930 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 100

Conread position: 842-1318
Cow position: chrX:46032974-46032499 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 324
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 141, 57

Conread position: 842-1319
Cow position: chrX:14884220-14883727 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 380

Conread position: 842-1319
Cow position: chrX:34376701-34377169 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 53

Conread position: 842-1319
Cow position: chrX:37072150-37072616 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 53

Conread position: 842-1319
Cow position: chrX:43114917-43115380 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 25

Conread position: 842-1319
Cow position: chrX:45430274-45429801 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 212

Conread position: 842-1321
Cow position: chrX:22115538-22115082 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 842-1325
Cow position: chrX:20340147-20339659 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 107

Conread position: 842-1327
Cow position: chrX:161172-161638 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 65

Conread position: 842-1328
Cow position: chrX:13912823-13913314 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 173

Conread position: 842-1329
Cow position: chrX:16762516-16763009 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 842-1332
Cow position: chrX:34454413-34454902 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 321
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 123, 237

Conread position: 842-1334
Cow position: chrX:12290480-12290962 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 842-1334
Cow position: chrX:34532275-34532755 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 842-1334
Cow position: chrX:41526775-41526288 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 842-1335
Cow position: chrX:31729202-31729682 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 842-1335
Cow position: chrX:31949187-31948688 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 129

Conread position: 842-1337
Cow position: chrX:6413790-6414277 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 92

Conread position: 842-1337
Cow position: chrX:6544000-6544491 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 229

Conread position: 842-1340
Cow position: chrX:4269324-4268820 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 245

Conread position: 842-1342
Cow position: chrX:151645-152158 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 98

Conread position: 842-1342
Cow position: chrX:15147442-15146942 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 842-1342
Cow position: chrX:31489256-31489774 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 68

Conread position: 842-1342
Cow position: chrX:41790696-41790177 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 43

Conread position: 842-1343
Cow position: chrX:754702-755197 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 338
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 141, 248

Conread position: 842-1343
Cow position: chrX:21064030-21064540 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 97

Conread position: 842-1343
Cow position: chrX:23564053-23563537 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 249

Conread position: 842-1344
Cow position: chrX:22812806-22813320 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 842-1344
Cow position: chrX:30133580-30133068 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 84

Conread position: 843-1033
Cow position: chrX:45693851-45694048 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 168

Conread position: 843-1222
Cow position: chrX:35288405-35288787 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 101

Conread position: 843-1227
Cow position: chrX:917625-917231 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 843-1231
Cow position: chrX:7646003-7646397 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 118

Conread position: 843-1303
Cow position: chrX:14973987-14973543 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 43

Conread position: 843-1313
Cow position: chrX:31260886-31260401 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 314
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 187

Conread position: 843-1326
Cow position: chrX:12249546-12250052 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 843-1333
Cow position: chrX:126536-127002 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 321
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 6, 139

Conread position: 843-1334
Cow position: chrX:4996356-4996832 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 79

Conread position: 844-979
Cow position: chrX:5919216-5919353 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 35

Conread position: 844-1050
Cow position: chrX:160287-160083 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 50

Conread position: 844-1072
Cow position: chrX:39556071-39555854 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 844-1096
Cow position: chrX:626299-626050 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 131

Conread position: 844-1107
Cow position: chrX:3649063-3648797 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 184

Conread position: 844-1135
Cow position: chrX:9997587-9997288 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 120, 51

Conread position: 844-1158
Cow position: chrX:1810416-1810092 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 47

Conread position: 844-1249
Cow position: chrX:34502666-34503079 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 52

Conread position: 844-1299
Cow position: chrX:12309643-12309175 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 844-1342
Cow position: chrX:44192697-44192190 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 82

Conread position: 845-984
Cow position: chrX:43983918-43984059 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 845-985
Cow position: chrX:5856576-5856440 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 845-985
Cow position: chrX:7382070-7382206 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 845-985
Cow position: chrX:21795243-21795378 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 845-985
Cow position: chrX:42585322-42585188 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 845-1056
Cow position: chrX:38967397-38967613 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 0

Conread position: 845-1088
Cow position: chrX:11806270-11806014 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 0

Conread position: 845-1090
Cow position: chrX:36778153-36778414 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 845-1091
Cow position: chrX:28097872-28098115 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 142, 50

Conread position: 845-1101
Cow position: chrX:11820105-11820363 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 209

Conread position: 845-1123
Cow position: chrX:42086609-42086886 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 142, 37

Conread position: 845-1154
Cow position: chrX:34192427-34192734 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 23

Conread position: 845-1182
Cow position: chrX:32743285-32743626 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 121, 307

Conread position: 845-1190
Cow position: chrX:11314031-11313685 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 93, 48

Conread position: 845-1192
Cow position: chrX:3161269-3160932 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 122

Conread position: 845-1192
Cow position: chrX:12826494-12826852 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 238

Conread position: 845-1224
Cow position: chrX:47481545-47481930 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 26, 259

Conread position: 845-1246
Cow position: chrX:28878415-28878020 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 119

Conread position: 845-1267
Cow position: chrX:32171135-32170714 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 133, 102

Conread position: 845-1279
Cow position: chrX:45967909-45968336 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 51, 115

Conread position: 845-1319
Cow position: chrX:24366082-24365592 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 845-1321
Cow position: chrX:34554477-34554956 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 845-1335
Cow position: chrX:41103535-41104048 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 318
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 190

Conread position: 845-1336
Cow position: chrX:10866120-10865621 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 50

Conread position: 845-1339
Cow position: chrX:34565044-34565534 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 59

Conread position: 845-1342
Cow position: chrX:40481126-40480598 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 845-1343
Cow position: chrX:41673849-41674353 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 347
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 86

Conread position: 845-1343
Cow position: chrX:47873594-47873079 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 332
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 137, 82

Conread position: 846-985
Cow position: chrX:10437919-10437780 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 11

Conread position: 846-1083
Cow position: chrX:19019361-19019110 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 11

Conread position: 846-1086
Cow position: chrX:48247084-48246853 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 199, 55

Conread position: 847-975
Cow position: chrX:616657-616528 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 847-985
Cow position: chrX:42855157-42855295 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 121
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 847-1088
Cow position: chrX:25946088-25945830 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 133, 0

Conread position: 847-1088
Cow position: chrX:40648412-40648650 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 847-1129
Cow position: chrX:10306419-10306714 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 255

Conread position: 847-1140
Cow position: chrX:34270162-34270452 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 133, 36

Conread position: 847-1165
Cow position: chrX:16074325-16074656 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 130, 207

Conread position: 847-1175
Cow position: chrX:42507898-42507563 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 112, 200

Conread position: 847-1192
Cow position: chrX:20376716-20377072 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 225
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 348

Conread position: 847-1222
Cow position: chrX:7277676-7278043 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 112, 31

Conread position: 847-1244
Cow position: chrX:878622-878226 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 48

Conread position: 847-1245
Cow position: chrX:20697857-20697454 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 847-1247
Cow position: chrX:28134095-28134497 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 48

Conread position: 847-1248
Cow position: chrX:8796996-8797405 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 52

Conread position: 847-1252
Cow position: chrX:42171550-42171136 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 48

Conread position: 847-1267
Cow position: chrX:24288167-24287755 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 276
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 43

Conread position: 847-1279
Cow position: chrX:28866243-28865814 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 40

Conread position: 847-1299
Cow position: chrX:13868443-13868914 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 317
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 119, 48

Conread position: 847-1317
Cow position: chrX:7695509-7695991 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 847-1319
Cow position: chrX:8925452-8925910 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 247

Conread position: 847-1319
Cow position: chrX:12437490-12437053 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 48

Conread position: 847-1320
Cow position: chrX:15485879-15485402 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 265

Conread position: 847-1326
Cow position: chrX:21593032-21593528 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 259

Conread position: 847-1328
Cow position: chrX:38963858-38964335 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 49

Conread position: 847-1330
Cow position: chrX:7351048-7351547 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 81

Conread position: 847-1333
Cow position: chrX:34441701-34441210 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 48

Conread position: 847-1334
Cow position: chrX:27442806-27442295 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 75

Conread position: 847-1337
Cow position: chrX:5118736-5118252 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 83

Conread position: 847-1338
Cow position: chrX:44054551-44055053 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 847-1340
Cow position: chrX:13177718-13177233 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 189

Conread position: 847-1342
Cow position: chrX:5872062-5872585 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 256

Conread position: 847-1342
Cow position: chrX:11844492-11843985 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 49

Conread position: 847-1343
Cow position: chrX:27446437-27446935 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 246

Conread position: 847-1344
Cow position: chrX:20887895-20887394 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 338
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 112, 48

Conread position: 847-1344
Cow position: chrX:38218464-38218968 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 48

Conread position: 848-981
Cow position: chrX:5556081-5555953 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 848-981
Cow position: chrX:48227865-48227734 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 112

Conread position: 848-1006
Cow position: chrX:10915788-10915949 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 848-1008
Cow position: chrX:24173419-24173261 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 110, 137

Conread position: 848-1010
Cow position: chrX:12314104-12314263 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 150

Conread position: 848-1098
Cow position: chrX:23572050-23571785 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 259

Conread position: 848-1107
Cow position: chrX:45939696-45939433 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 248

Conread position: 848-1107
Cow position: chrX:47362136-47361874 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 166

Conread position: 848-1128
Cow position: chrX:11581684-11581971 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 167

Conread position: 848-1154
Cow position: chrX:20709822-20710138 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 139, 22

Conread position: 848-1224
Cow position: chrX:37232159-37232541 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 245

Conread position: 848-1287
Cow position: chrX:13648034-13647586 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 106

Conread position: 848-1294
Cow position: chrX:46771222-46770757 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 306
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 246

Conread position: 848-1314
Cow position: chrX:35268640-35269081 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 848-1320
Cow position: chrX:40826997-40826519 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 91

Conread position: 848-1321
Cow position: chrX:28847129-28846661 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 240

Conread position: 848-1325
Cow position: chrX:26492752-26493243 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 253

Conread position: 848-1343
Cow position: chrX:5638419-5637919 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 47

Conread position: 848-1343
Cow position: chrX:15545647-15546135 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 48

Conread position: 849-1001
Cow position: chrX:45787405-45787561 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 849-1243
Cow position: chrX:11073440-11073038 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 849-1246
Cow position: chrX:37836337-37836734 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 250

Conread position: 850-1115
Cow position: chrX:48536914-48536655 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 57

Conread position: 850-1133
Cow position: chrX:44835064-44834763 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 293

Conread position: 851-1096
Cow position: chrX:35041972-35042234 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 851-1153
Cow position: chrX:25232343-25232656 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 851-1338
Cow position: chrX:27432166-27431675 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 239

Conread position: 852-1050
Cow position: chrX:21495512-21495705 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 184, 132

Conread position: 852-1073
Cow position: chrX:2648597-2648369 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 44

Conread position: 852-1086
Cow position: chrX:36840626-36840867 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 45

Conread position: 852-1150
Cow position: chrX:41167210-41166902 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 9

Conread position: 852-1333
Cow position: chrX:25571242-25570760 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 314
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 13

Conread position: 854-1238
Cow position: chrX:45174600-45174998 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 96, 183

Conread position: 854-1334
Cow position: chrX:11655842-11656322 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 237

Conread position: 855-1171
Cow position: chrX:678811-678474 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 200

Conread position: 856-1083
Cow position: chrX:35284375-35284615 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 857-1130
Cow position: chrX:32128221-32127952 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 38

Conread position: 857-1249
Cow position: chrX:45113387-45113775 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 101

Conread position: 857-1303
Cow position: chrX:4768509-4768942 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 93

Conread position: 857-1327
Cow position: chrX:45501909-45502375 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 12

Conread position: 858-1223
Cow position: chrX:11939164-11938801 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 46

Conread position: 858-1319
Cow position: chrX:9360643-9361116 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 84

Conread position: 859-973
Cow position: chrX:44908083-44908196 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 859-973
Cow position: chrX:48578176-48578290 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 859-981
Cow position: chrX:8492997-8492875 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 859-981
Cow position: chrX:20167965-20168089 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 859-982
Cow position: chrX:47243518-47243394 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 859-985
Cow position: chrX:33519378-33519504 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 859-1045
Cow position: chrX:2206783-2206596 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 142, 0

Conread position: 859-1114
Cow position: chrX:8558702-8558431 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 125, 180

Conread position: 859-1117
Cow position: chrX:44053019-44053287 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 859-1126
Cow position: chrX:9953902-9954175 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 200

Conread position: 859-1129
Cow position: chrX:23970150-23970418 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 36

Conread position: 859-1139
Cow position: chrX:11674825-11675113 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 185

Conread position: 859-1160
Cow position: chrX:26876120-26875811 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 36

Conread position: 859-1163
Cow position: chrX:9855061-9855369 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 123, 200

Conread position: 859-1175
Cow position: chrX:8517637-8517960 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 56

Conread position: 859-1186
Cow position: chrX:40692977-40692655 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 169, 76

Conread position: 859-1186
Cow position: chrX:42499268-42498952 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 108

Conread position: 859-1199
Cow position: chrX:26625916-26625562 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 196

Conread position: 859-1203
Cow position: chrX:2029151-2029498 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 36

Conread position: 859-1203
Cow position: chrX:21004445-21004797 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 124, 30

Conread position: 859-1203
Cow position: chrX:24132390-24132038 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 49

Conread position: 859-1203
Cow position: chrX:42011041-42011394 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 125, 36

Conread position: 859-1221
Cow position: chrX:17631041-17630670 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 39

Conread position: 859-1221
Cow position: chrX:25419400-25419023 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 36

Conread position: 859-1221
Cow position: chrX:27287958-27287606 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 233
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 36

Conread position: 859-1226
Cow position: chrX:37119360-37119728 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 100, 85

Conread position: 859-1245
Cow position: chrX:4044089-4043714 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 37

Conread position: 859-1245
Cow position: chrX:43567700-43568073 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 187, 83

Conread position: 859-1248
Cow position: chrX:9416932-9416526 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 278

Conread position: 859-1248
Cow position: chrX:32309867-32310264 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 36

Conread position: 859-1248
Cow position: chrX:33493536-33493933 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 36

Conread position: 859-1248
Cow position: chrX:41884657-41884256 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 383

Conread position: 859-1249
Cow position: chrX:619247-618849 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 334

Conread position: 859-1249
Cow position: chrX:27394253-27393869 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 148

Conread position: 859-1251
Cow position: chrX:23514257-23513861 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 56

Conread position: 859-1272
Cow position: chrX:16416269-16416686 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 126, 47

Conread position: 859-1279
Cow position: chrX:34663078-34662656 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 22

Conread position: 859-1304
Cow position: chrX:34543548-34544001 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 71

Conread position: 859-1313
Cow position: chrX:38642021-38642466 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 37

Conread position: 859-1318
Cow position: chrX:47249027-47248568 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 309

Conread position: 859-1332
Cow position: chrX:33855472-33854985 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 346

Conread position: 859-1334
Cow position: chrX:22624242-22624706 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 311
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 153, 66

Conread position: 859-1336
Cow position: chrX:21672312-21672810 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 242

Conread position: 859-1337
Cow position: chrX:32419971-32420458 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 245

Conread position: 859-1344
Cow position: chrX:38935042-38935534 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 287

Conread position: 859-1344
Cow position: chrX:44961508-44962015 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 860-977
Cow position: chrX:7710929-7710813 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 860-1007
Cow position: chrX:29049732-29049880 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 35

Conread position: 860-1062
Cow position: chrX:44731356-44731571 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 860-1115
Cow position: chrX:47232599-47232857 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 136

Conread position: 860-1189
Cow position: chrX:24259816-24259480 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 34

Conread position: 860-1203
Cow position: chrX:7508901-7509252 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 69

Conread position: 860-1203
Cow position: chrX:28111268-28111622 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 214

Conread position: 860-1222
Cow position: chrX:9041468-9041112 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 36

Conread position: 860-1237
Cow position: chrX:19930419-19930789 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 6

Conread position: 860-1249
Cow position: chrX:17888646-17888266 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 79

Conread position: 860-1291
Cow position: chrX:9635419-9634987 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 161

Conread position: 860-1299
Cow position: chrX:21663071-21663505 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 282
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 205, 51

Conread position: 860-1313
Cow position: chrX:17794747-17795203 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 183

Conread position: 860-1341
Cow position: chrX:42492748-42492269 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 21

Conread position: 861-1121
Cow position: chrX:40116188-40116448 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 42

Conread position: 861-1248
Cow position: chrX:27772193-27771812 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 34

Conread position: 861-1251
Cow position: chrX:6690485-6690099 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 104

Conread position: 862-985
Cow position: chrX:919527-919406 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 19

Conread position: 862-1216
Cow position: chrX:15814861-15815208 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 88

Conread position: 862-1231
Cow position: chrX:30421175-30420811 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 36

Conread position: 862-1320
Cow position: chrX:9252414-9251932 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 244

Conread position: 862-1330
Cow position: chrX:46532745-46532249 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 326
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 125, 33

Conread position: 863-1308
Cow position: chrX:27514633-27515078 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 182

Conread position: 863-1313
Cow position: chrX:22074565-22075019 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 193

Conread position: 864-1087
Cow position: chrX:2383255-2383488 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 100, 32

Conread position: 864-1111
Cow position: chrX:6639890-6640127 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 96

Conread position: 864-1130
Cow position: chrX:47757163-47756888 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 170

Conread position: 864-1223
Cow position: chrX:39558582-39558216 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 321

Conread position: 864-1248
Cow position: chrX:32623349-32623728 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 12

Conread position: 864-1248
Cow position: chrX:33639737-33640131 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 172

Conread position: 864-1318
Cow position: chrX:38549214-38549676 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 224

Conread position: 865-1324
Cow position: chrX:9201314-9201778 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 31

Conread position: 865-1327
Cow position: chrX:36975716-36976192 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 227

Conread position: 865-1343
Cow position: chrX:17231501-17231991 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 172

Conread position: 869-1130
Cow position: chrX:14900950-14900690 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 26

Conread position: 869-1344
Cow position: chrX:12980058-12979577 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 8

Conread position: 870-1062
Cow position: chrX:24234706-24234502 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 870-1080
Cow position: chrX:877251-877042 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 25

Conread position: 870-1085
Cow position: chrX:42339164-42338949 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 94, 131

Conread position: 870-1089
Cow position: chrX:7513288-7513511 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 89, 34

Conread position: 870-1092
Cow position: chrX:16790065-16789848 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 25

Conread position: 870-1097
Cow position: chrX:13265848-13265615 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 870-1104
Cow position: chrX:1728645-1728413 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 26

Conread position: 870-1116
Cow position: chrX:44870858-44870611 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 132, 78

Conread position: 870-1143
Cow position: chrX:41198876-41199159 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 233

Conread position: 870-1177
Cow position: chrX:40788976-40789296 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 290

Conread position: 870-1180
Cow position: chrX:12405597-12405291 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 31

Conread position: 870-1203
Cow position: chrX:3130353-3130685 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 213

Conread position: 870-1220
Cow position: chrX:11455280-11454919 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 85, 25

Conread position: 870-1221
Cow position: chrX:27176548-27176182 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 201

Conread position: 870-1226
Cow position: chrX:17662825-17662462 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 234

Conread position: 870-1236
Cow position: chrX:6278734-6278354 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 351

Conread position: 870-1249
Cow position: chrX:3154474-3154084 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 256
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 26

Conread position: 870-1298
Cow position: chrX:22821819-22822264 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 117, 216

Conread position: 870-1299
Cow position: chrX:35542663-35543094 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 234

Conread position: 870-1317
Cow position: chrX:2300705-2301151 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 284
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 90

Conread position: 870-1325
Cow position: chrX:42247412-42246944 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 139

Conread position: 870-1328
Cow position: chrX:37489502-37489968 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 160

Conread position: 870-1338
Cow position: chrX:30338154-30337705 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 92

Conread position: 870-1339
Cow position: chrX:42381328-42380862 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 164

Conread position: 870-1344
Cow position: chrX:30963100-30962622 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 212

Conread position: 871-1074
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 104

Conread position: 871-1101
Cow position: chrX:13245364-13245605 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 59

Conread position: 871-1140
Cow position: chrX:35681118-35681392 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 72

Conread position: 871-1183
Cow position: chrX:11856202-11856523 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 40

Conread position: 871-1221
Cow position: chrX:7425237-7425596 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 167

Conread position: 872-1065
Cow position: chrX:4942976-4942780 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 872-1203
Cow position: chrX:4865025-4865346 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 149

Conread position: 872-1226
Cow position: chrX:47054754-47054389 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 59

Conread position: 872-1249
Cow position: chrX:13382098-13382482 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 234

Conread position: 872-1299
Cow position: chrX:44396789-44397221 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 872-1338
Cow position: chrX:7721758-7722224 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 164

Conread position: 873-984
Cow position: chrX:33538723-33538829 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 873-990
Cow position: chrX:24318384-24318503 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 22

Conread position: 873-1085
Cow position: chrX:31745272-31745065 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 112

Conread position: 873-1087
Cow position: chrX:7362078-7361863 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 11

Conread position: 873-1111
Cow position: chrX:4750523-4750282 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 86, 26

Conread position: 873-1131
Cow position: chrX:29509669-29509397 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 240

Conread position: 873-1248
Cow position: chrX:15305513-15305139 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 239
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 52

Conread position: 873-1332
Cow position: chrX:1465962-1466407 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 85

Conread position: 873-1340
Cow position: chrX:21642703-21642232 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 873-1342
Cow position: chrX:28013665-28013187 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 317
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 113, 94

Conread position: 874-953
Cow position: chrX:21987554-21987475 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 73
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 874-1045
Cow position: chrX:16324187-16324010 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 13

Conread position: 874-1165
Cow position: chrX:13785591-13785285 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 96

Conread position: 874-1341
Cow position: chrX:13191768-13191317 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 320
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 103, 179

Conread position: 875-1221
Cow position: chrX:1514624-1514288 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 112

Conread position: 875-1253
Cow position: chrX:6265809-6265440 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 172, 92

Conread position: 875-1316
Cow position: chrX:6488363-6488792 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 90

Conread position: 875-1319
Cow position: chrX:40035670-40035212 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 152

Conread position: 875-1342
Cow position: chrX:16541899-16541403 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 323
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 21

Conread position: 876-985
Cow position: chrX:23017780-23017889 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 7

Conread position: 876-985
Cow position: chrX:29193786-29193890 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 19

Conread position: 876-1342
Cow position: chrX:33000679-33001150 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 300

Conread position: 877-1221
Cow position: chrX:37574635-37574971 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 82

Conread position: 877-1337
Cow position: chrX:48236590-48237066 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 319
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 231

Conread position: 878-1089
Cow position: chrX:41403752-41403980 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 878-1089
Cow position: chrX:41410300-41410528 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 878-1234
Cow position: chrX:10959623-10959251 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 878-1246
Cow position: chrX:23091661-23092027 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 138

Conread position: 878-1248
Cow position: chrX:1503119-1503484 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 17

Conread position: 878-1318
Cow position: chrX:36283125-36283569 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 213

Conread position: 878-1337
Cow position: chrX:29602053-29601579 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 878-1343
Cow position: chrX:46073042-46072576 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 363

Conread position: 879-1237
Cow position: chrX:20801560-20801915 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 56

Conread position: 880-1334
Cow position: chrX:11633460-11633927 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 360

Conread position: 881-979
Cow position: chrX:25036918-25036819 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 881-1130
Cow position: chrX:2186041-2186294 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 111, 130

Conread position: 881-1226
Cow position: chrX:29120841-29121183 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 15

Conread position: 881-1229
Cow position: chrX:37910235-37910583 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 172

Conread position: 881-1319
Cow position: chrX:37781330-37780881 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 19

Conread position: 882-1062
Cow position: chrX:46430075-46429887 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 882-1087
Cow position: chrX:45015369-45015577 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 105

Conread position: 882-1313
Cow position: chrX:40567383-40567829 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 99, 172

Conread position: 883-1080
Cow position: chrX:42282217-42282420 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 131

Conread position: 884-1335
Cow position: chrX:34411625-34412094 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 886-1331
Cow position: chrX:27174782-27175240 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 275

Conread position: 887-1117
Cow position: chrX:20752048-20752281 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 78

Conread position: 887-1291
Cow position: chrX:841947-842360 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 79, 217

Conread position: 887-1319
Cow position: chrX:29542430-29541998 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 306

Conread position: 887-1344
Cow position: chrX:3579735-3580203 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 12

Conread position: 888-1117
Cow position: chrX:29876277-29876046 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 119

Conread position: 889-1081
Cow position: chrX:47453917-47454122 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 889-1126
Cow position: chrX:28836110-28835866 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 21

Conread position: 889-1163
Cow position: chrX:6234658-6234376 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 889-1237
Cow position: chrX:45845886-45846248 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 254

Conread position: 889-1318
Cow position: chrX:9425951-9425533 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 98, 123

Conread position: 889-1324
Cow position: chrX:32329951-32330406 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 90, 33

Conread position: 890-1319
Cow position: chrX:38852988-38853441 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 189

Conread position: 890-1338
Cow position: chrX:45110447-45110898 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 210

Conread position: 891-1132
Cow position: chrX:26285772-26286023 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 139

Conread position: 891-1328
Cow position: chrX:4826035-4825610 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 93, 69

Conread position: 892-1325
Cow position: chrX:16996300-16996730 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 291
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 75, 135

Conread position: 892-1344
Cow position: chrX:46587611-46588074 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 75

Conread position: 893-1140
Cow position: chrX:39938728-39938473 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 127

Conread position: 895-1151
Cow position: chrX:17908487-17908227 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 65

Conread position: 895-1322
Cow position: chrX:29545083-29544652 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 300
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 92, 54

Conread position: 896-1331
Cow position: chrX:36355921-36356347 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 71, 8

Conread position: 897-1326
Cow position: chrX:1499468-1499891 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 68

Conread position: 899-1090
Cow position: chrX:30833045-30832846 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 899-1106
Cow position: chrX:4091448-4091664 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 78, 210

Conread position: 899-1203
Cow position: chrX:47303079-47302764 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 133

Conread position: 900-1203
Cow position: chrX:47301102-47300790 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 132

Conread position: 901-1183
Cow position: chrX:40809489-40809786 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 901-1321
Cow position: chrX:10252379-10251970 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 904-1294
Cow position: chrX:47484466-47484057 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 205

Conread position: 906-1169
Cow position: chrX:37540932-37541196 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 165

Conread position: 906-1174
Cow position: chrX:8991695-8991969 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 192

Conread position: 906-1317
Cow position: chrX:8869601-8869176 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 338

Conread position: 907-1249
Cow position: chrX:43730406-43730067 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 149

Conread position: 908-1209
Cow position: chrX:47362802-47362504 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 124

Conread position: 908-1244
Cow position: chrX:3489075-3488739 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 50

Conread position: 908-1245
Cow position: chrX:31311835-31312182 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 332

Conread position: 908-1249
Cow position: chrX:23785463-23785807 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 104

Conread position: 909-1099
Cow position: chrX:1505523-1505720 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 23

Conread position: 910-1248
Cow position: chrX:42235722-42235369 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 334

Conread position: 912-1097
Cow position: chrX:31256681-31256874 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 914-1249
Cow position: chrX:36067835-36068176 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 98

Conread position: 916-1344
Cow position: chrX:32820847-32821290 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 11

Conread position: 920-1279
Cow position: chrX:31252239-31252598 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 67, 21

Conread position: 920-1337
Cow position: chrX:36060973-36061405 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 277
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 291

Conread position: 921-1322
Cow position: chrX:47186498-47186093 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 259
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 170

Conread position: 922-1249
Cow position: chrX:47166061-47165730 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 21

Conread position: 923-1290
Cow position: chrX:169701-169340 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 44

Conread position: 923-1334
Cow position: chrX:27145447-27145844 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 142

Conread position: 923-1341
Cow position: chrX:18485619-18486054 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 284
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 180

Conread position: 925-1332
Cow position: chrX:22387421-22387001 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 164

Conread position: 925-1344
Cow position: chrX:35885903-35885479 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 926-1131
Cow position: chrX:37750426-37750213 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 927-1326
Cow position: chrX:34792482-34792086 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 162

Conread position: 927-1327
Cow position: chrX:4398954-4399356 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 127

Conread position: 932-1203
Cow position: chrX:44836828-44837089 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 53

Conread position: 932-1325
Cow position: chrX:6407382-6407780 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 103

Conread position: 932-1343
Cow position: chrX:22921147-22921573 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 272
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 15

Conread position: 933-1289
Cow position: chrX:14275901-14275548 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 934-1331
Cow position: chrX:25208011-25207619 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 143

Conread position: 935-1293
Cow position: chrX:41068564-41068924 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 66

Conread position: 936-1303
Cow position: chrX:45875239-45875604 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 29

Conread position: 942-1332
Cow position: chrX:35822184-35822574 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 7

Conread position: 944-1303
Cow position: chrX:27227969-27228343 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 161

Conread position: 949-1320
Cow position: chrX:4296963-4296593 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 139

Conread position: 961-1325
Cow position: chrX:34313892-34314257 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 963-1303
Cow position: chrX:30840417-30840755 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 50

Conread position: 963-1335
Cow position: chrX:34315397-34315773 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 17

Conread position: 965-1316
Cow position: chrX:20168435-20168782 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 19

Conread position: 965-1334
Cow position: chrX:9651152-9650780 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 264

Conread position: 970-1221
Cow position: chrX:11851792-11851548 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 107

Conread position: 972-1330
Cow position: chrX:29229889-29230249 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 106

Conread position: 973-1336
Cow position: chrX:46291020-46291388 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 74, 96

Conread position: 975-1216
Cow position: chrX:19273839-19273581 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 977-1249
Cow position: chrX:7710658-7710381 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 124

Conread position: 979-1231
Cow position: chrX:37986120-37986366 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 7, 63

Conread position: 979-1249
Cow position: chrX:616375-616099 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 106

Conread position: 979-1303
Cow position: chrX:42927932-42927616 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 105

Conread position: 979-1319
Cow position: chrX:26881681-26881332 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 303

Conread position: 979-1329
Cow position: chrX:41870960-41871300 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 51

Conread position: 979-1331
Cow position: chrX:20584211-20584552 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 253

Conread position: 979-1338
Cow position: chrX:41027044-41027408 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 7, 27

Conread position: 982-1340
Cow position: chrX:40320296-40320655 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 224
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 83

Conread position: 982-1343
Cow position: chrX:18111281-18111632 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 41

Conread position: 984-1243
Cow position: chrX:5679673-5679421 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 80

Conread position: 985-1249
Cow position: chrX:11085163-11084906 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 100

Conread position: 985-1303
Cow position: chrX:40685437-40685115 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 247

Conread position: 985-1316
Cow position: chrX:13923765-13924088 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 102

Conread position: 985-1327
Cow position: chrX:18204569-18204228 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 82

Conread position: 985-1335
Cow position: chrX:27946165-27945805 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 349

Conread position: 985-1337
Cow position: chrX:5919390-5919739 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 55

Conread position: 985-1340
Cow position: chrX:4403208-4403570 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 81

Conread position: 985-1341
Cow position: chrX:34505153-34504802 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 52

Conread position: 986-1222
Cow position: chrX:33539060-33539302 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 115

Conread position: 986-1240
Cow position: chrX:45670122-45670372 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 117, 17

Conread position: 986-1313
Cow position: chrX:21986397-21986077 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 149

Conread position: 990-1249
Cow position: chrX:16348671-16348412 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 162

Conread position: 992-1246
Cow position: chrX:18273156-18272901 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 7

Conread position: 992-1314
Cow position: chrX:10516157-10516479 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 49

Conread position: 992-1344
Cow position: chrX:45976821-45977179 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 231

Conread position: 993-1329
Cow position: chrX:42855358-42855704 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 12

Conread position: 993-1344
Cow position: chrX:34837152-34836819 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 995-1343
Cow position: chrX:12095870-12095512 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 101

Conread position: 996-1319
Cow position: chrX:38560462-38560780 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 75

Conread position: 997-1338
Cow position: chrX:47345240-47345580 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 52, 83

Conread position: 999-1320
Cow position: chrX:33654933-33654612 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 94

Conread position: 999-1327
Cow position: chrX:45648781-45649108 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 44

Conread position: 1000-1287
Cow position: chrX:918818-918528 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 47, 181

Conread position: 1000-1332
Cow position: chrX:27261097-27261432 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 39

Conread position: 1000-1332
Cow position: chrX:29050156-29050484 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 151

Conread position: 1005-1321
Cow position: chrX:6559531-6559223 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 83

Conread position: 1005-1328
Cow position: chrX:40680525-40680854 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1009-1303
Cow position: chrX:41192626-41192903 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 38

Conread position: 1010-1338
Cow position: chrX:46546954-46546626 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 27

Conread position: 1010-1342
Cow position: chrX:48071080-48071413 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 67

Conread position: 1011-1287
Cow position: chrX:39220000-39220284 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 69

Conread position: 1012-1248
Cow position: chrX:23562556-23562788 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 1012-1335
Cow position: chrX:36866092-36866419 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 185

Conread position: 1012-1344
Cow position: chrX:22283753-22284096 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 56

Conread position: 1013-1280
Cow position: chrX:4515606-4515879 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 76

Conread position: 1013-1333
Cow position: chrX:4153113-4152797 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 220

Conread position: 1016-1325
Cow position: chrX:19469575-19469279 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1018-1333
Cow position: chrX:1088209-1087902 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 62, 34

Conread position: 1025-1294
Cow position: chrX:19965468-19965190 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 52

Conread position: 1028-1343
Cow position: chrX:20957188-20957494 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 213, 11

Conread position: 1030-1317
Cow position: chrX:4109131-4109413 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 62

Conread position: 1030-1327
Cow position: chrX:13121869-13122182 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1030-1342
Cow position: chrX:2675018-2674700 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 69

Conread position: 1031-1226
Cow position: chrX:46429881-46429683 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 1031-1344
Cow position: chrX:27511367-27511677 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 58

Conread position: 1031-1344
Cow position: chrX:39352720-39353027 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 103

Conread position: 1032-1344
Cow position: chrX:36109675-36109359 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 13

Conread position: 1038-1324
Cow position: chrX:44339377-44339086 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 112

Conread position: 1039-1336
Cow position: chrX:296345-296639 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 83

Conread position: 1043-1314
Cow position: chrX:4645958-4645689 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 49

Conread position: 1044-1243
Cow position: chrX:22915081-22914891 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1044-1321
Cow position: chrX:36392233-36391956 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 47

Conread position: 1044-1321
Cow position: chrX:40108561-40108281 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 24

Conread position: 1044-1331
Cow position: chrX:22393031-22392749 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 171

Conread position: 1044-1337
Cow position: chrX:27306407-27306689 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 194

Conread position: 1044-1341
Cow position: chrX:35985773-35986069 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 1045-1335
Cow position: chrX:2523722-2523456 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1045-1343
Cow position: chrX:6599828-6599520 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 1046-1327
Cow position: chrX:11326143-11325869 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 155

Conread position: 1047-1222
Cow position: chrX:12082367-12082192 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 106

Conread position: 1049-1187
Cow position: chrX:44095218-44095357 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1049-1326
Cow position: chrX:24749047-24749326 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 176, 107

Conread position: 1049-1338
Cow position: chrX:16984587-16984882 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 29, 165

Conread position: 1052-1216
Cow position: chrX:29585083-29585245 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1052-1331
Cow position: chrX:19394515-19394797 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 1053-1248
Cow position: chrX:40532080-40531885 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 39

Conread position: 1054-1341
Cow position: chrX:4289404-4289687 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 178

Conread position: 1055-1342
Cow position: chrX:17956661-17956943 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 33

Conread position: 1063-1337
Cow position: chrX:28940219-28940491 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 35

Conread position: 1071-1288
Cow position: chrX:24633665-24633893 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 1071-1303
Cow position: chrX:42836166-42836395 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 150, 28

Conread position: 1072-1342
Cow position: chrX:16836304-16836041 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 1073-1308
Cow position: chrX:42282561-42282796 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 24

Conread position: 1073-1344
Cow position: chrX:42450031-42449759 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 24

Conread position: 1075-1319
Cow position: chrX:3806670-3806909 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 134, 18

Conread position: 1076-1319
Cow position: chrX:40336896-40337141 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 78

Conread position: 1076-1341
Cow position: chrX:26843281-26843012 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 140, 15

Conread position: 1080-1318
Cow position: chrX:38587853-38587616 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 147, 212

Conread position: 1081-1314
Cow position: chrX:4466958-4467176 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 0

Conread position: 1081-1340
Cow position: chrX:26205457-26205204 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 123

Conread position: 1082-1313
Cow position: chrX:8326896-8327129 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 27

Conread position: 1082-1341
Cow position: chrX:12972673-12972930 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 147

Conread position: 1084-1336
Cow position: chrX:11763007-11762762 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 237, 142

Conread position: 1085-1319
Cow position: chrX:2935952-2936183 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 141, 0

Conread position: 1093-1251
Cow position: chrX:29501878-29501726 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1093-1313
Cow position: chrX:11653767-11653991 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 141

Conread position: 1093-1318
Cow position: chrX:32208819-32208598 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 1093-1330
Cow position: chrX:39290362-39290597 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 190, 125

Conread position: 1093-1336
Cow position: chrX:35275989-35276233 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 32

Conread position: 1093-1337
Cow position: chrX:42479836-42480075 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 190, 135

Conread position: 1093-1343
Cow position: chrX:25049279-25049029 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 133, 231

Conread position: 1094-1340
Cow position: chrX:32943072-32942828 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 129, 195

Conread position: 1094-1342
Cow position: chrX:27668954-27668708 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 134

Conread position: 1101-1329
Cow position: chrX:16324003-16323777 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 51

Conread position: 1101-1330
Cow position: chrX:19018820-19018585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 1101-1334
Cow position: chrX:35285184-35285420 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 1101-1338
Cow position: chrX:4559750-4559983 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 36

Conread position: 1101-1344
Cow position: chrX:24170718-24170470 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 85

Conread position: 1102-1335
Cow position: chrX:29467766-29467537 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 0

Conread position: 1103-1285
Cow position: chrX:41862377-41862556 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1104-1313
Cow position: chrX:38301823-38302038 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 1105-1343
Cow position: chrX:35658814-35659048 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 51

Conread position: 1106-1313
Cow position: chrX:27075035-27074827 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 137

Conread position: 1106-1320
Cow position: chrX:23471849-23471637 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 1106-1321
Cow position: chrX:20583682-20583892 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 1106-1326
Cow position: chrX:31479987-31480203 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 59

Conread position: 1106-1336
Cow position: chrX:47079643-47079882 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 1107-1340
Cow position: chrX:47854998-47855229 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 219, 75

Conread position: 1108-1248
Cow position: chrX:34508562-34508700 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 1109-1335
Cow position: chrX:5026275-5026496 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 176, 119

Conread position: 1111-1333
Cow position: chrX:41453323-41453545 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 208, 117

Conread position: 1114-1339
Cow position: chrX:32866899-32867120 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 0

Conread position: 1116-1330
Cow position: chrX:23359085-23358874 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 202, 40

Conread position: 1121-1279
Cow position: chrX:29688144-29687985 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 84

Conread position: 1121-1324
Cow position: chrX:41858850-41858649 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 9

Conread position: 1122-1317
Cow position: chrX:48822310-48822114 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 1122-1335
Cow position: chrX:2314587-2314373 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 83

Conread position: 1125-1333
Cow position: chrX:34991399-34991606 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 198, 103

Conread position: 1132-1317
Cow position: chrX:31983543-31983350 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 1133-1333
Cow position: chrX:16763882-16763686 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 1133-1339
Cow position: chrX:46068716-46068514 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 1136-1335
Cow position: chrX:42875258-42875453 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 1136-1344
Cow position: chrX:10415207-10414996 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 66

Conread position: 1139-1319
Cow position: chrX:41166776-41166599 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1148-1327
Cow position: chrX:17525809-17525641 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1148-1339
Cow position: chrX:51843-51653 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 167, 0

Conread position: 1151-1320
Cow position: chrX:6480535-6480364 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 1153-1335
Cow position: chrX:41215385-41215569 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 1153-1336
Cow position: chrX:40556396-40556215 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 76

Conread position: 1153-1341
Cow position: chrX:41010961-41011141 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 51

Conread position: 1153-1342
Cow position: chrX:1938077-1938267 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 51

Conread position: 1157-1317
Cow position: chrX:42086894-42087054 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 135

Conread position: 1157-1333
Cow position: chrX:5487872-5487706 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 1157-1340
Cow position: chrX:11529410-11529588 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1157-1344
Cow position: chrX:14135745-14135929 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 1158-1330
Cow position: chrX:11589299-11589127 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 100

Conread position: 1160-1303
Cow position: chrX:4486954-4486810 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 1161-1319
Cow position: chrX:3494974-3494820 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1161-1336
Cow position: chrX:32215299-32215474 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 43

Conread position: 1162-1329
Cow position: chrX:29682039-29681876 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 157, 58

Conread position: 1166-1286
Cow position: chrX:231942-231824 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1166-1344
Cow position: chrX:43059175-43059003 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1172-1339
Cow position: chrX:43028314-43028479 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1173-1317
Cow position: chrX:31279841-31279699 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1174-1331
Cow position: chrX:37176958-37177110 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 145, 54

Conread position: 1176-1317
Cow position: chrX:17744710-17744849 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.