Cow genome map

Conread name: Ss1.1-Pig4-TMW8045H10.3

Conread position: 1-144
Cow position: chr20:41977237-41977385 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-148
Cow position: chr20:11043680-11043528 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-171
Cow position: chr20:11923423-11923241 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-171
Cow position: chr20:24002141-24002314 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 139

Conread position: 1-177
Cow position: chr20:12334198-12334383 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-181
Cow position: chr20:19328215-19328412 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 98

Conread position: 1-182
Cow position: chr20:23679330-23679135 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 1-183
Cow position: chr20:9379225-9379423 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-184
Cow position: chr20:26469249-26469048 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-192
Cow position: chr20:39377329-39377140 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 79

Conread position: 1-200
Cow position: chr20:22445819-22445607 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 117

Conread position: 1-201
Cow position: chr20:31261548-31261757 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 135

Conread position: 1-204
Cow position: chr20:8910740-8910952 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-220
Cow position: chr20:3781610-3781375 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 1-220
Cow position: chr20:27339882-27340111 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 135

Conread position: 1-224
Cow position: chr20:34364851-34365079 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 115

Conread position: 1-229
Cow position: chr20:20312921-20312690 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 189

Conread position: 1-244
Cow position: chr20:18185395-18185638 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 106

Conread position: 1-252
Cow position: chr20:13967442-13967176 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 1-259
Cow position: chr20:14735492-14735759 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 187

Conread position: 1-270
Cow position: chr20:39019511-39019797 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 106

Conread position: 1-271
Cow position: chr20:8607104-8606830 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 125

Conread position: 1-272
Cow position: chr20:23505644-23505931 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 102

Conread position: 1-275
Cow position: chr20:35958461-35958754 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 186

Conread position: 1-278
Cow position: chr20:34918095-34918380 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 86

Conread position: 1-285
Cow position: chr20:31323613-31323903 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 103

Conread position: 1-287
Cow position: chr20:22313341-22313042 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 56, 34

Conread position: 1-290
Cow position: chr20:3607138-3606840 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 151

Conread position: 1-291
Cow position: chr20:35364867-35365168 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 79

Conread position: 1-293
Cow position: chr20:4621523-4621230 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 244

Conread position: 1-293
Cow position: chr20:28067610-28067299 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 268

Conread position: 1-293
Cow position: chr20:37165542-37165834 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 147

Conread position: 1-320
Cow position: chr20:38578941-38578614 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 201

Conread position: 1-322
Cow position: chr20:15593112-15593438 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 132

Conread position: 1-327
Cow position: chr20:12996192-12995849 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 88

Conread position: 1-327
Cow position: chr20:36207618-36207971 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 117

Conread position: 1-330
Cow position: chr20:6096669-6096336 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 79

Conread position: 1-331
Cow position: chr20:18320979-18320633 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 215

Conread position: 1-333
Cow position: chr20:38768637-38768298 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 184

Conread position: 1-334
Cow position: chr20:11550182-11550531 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 309

Conread position: 1-334
Cow position: chr20:19751125-19751471 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 196

Conread position: 1-334
Cow position: chr20:23871000-23870655 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 147

Conread position: 1-338
Cow position: chr20:33144739-33144387 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 189

Conread position: 1-381
Cow position: chr20:22959526-22959128 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 198

Conread position: 1-382
Cow position: chr20:18551179-18551583 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 32

Conread position: 1-382
Cow position: chr20:24398816-24398425 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 258
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 170

Conread position: 1-389
Cow position: chr20:9433414-9433807 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 50

Conread position: 1-389
Cow position: chr20:30817353-30817746 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 262
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 181

Conread position: 1-395
Cow position: chr20:13752056-13752444 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 1-397
Cow position: chr20:25162293-25161898 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 35

Conread position: 1-401
Cow position: chr20:14620457-14620069 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 80

Conread position: 1-402
Cow position: chr20:398478-398074 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 1-402
Cow position: chr20:7659398-7658987 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 25

Conread position: 1-402
Cow position: chr20:13493554-13493964 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 281
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 205

Conread position: 1-402
Cow position: chr20:18618454-18618836 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 124

Conread position: 1-402
Cow position: chr20:25009827-25009395 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 124

Conread position: 1-402
Cow position: chr20:31740399-31739979 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 1-406
Cow position: chr20:33532127-33532532 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 1-407
Cow position: chr20:22064886-22065304 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 139

Conread position: 1-407
Cow position: chr20:29844871-29845298 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 60, 147

Conread position: 1-407
Cow position: chr20:33435353-33434916 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 339

Conread position: 1-407
Cow position: chr20:39418078-39417660 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 156

Conread position: 1-408
Cow position: chr20:4945429-4945006 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 153

Conread position: 1-408
Cow position: chr20:20353098-20352666 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 281
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 12

Conread position: 1-408
Cow position: chr20:32847169-32847586 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 150

Conread position: 1-408
Cow position: chr20:35176953-35176530 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 29

Conread position: 1-408
Cow position: chr20:39517827-39518255 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 34

Conread position: 1-408
Cow position: chr20:42310146-42309724 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 184

Conread position: 1-409
Cow position: chr20:15549081-15548647 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 336

Conread position: 1-409
Cow position: chr20:23846856-23846420 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 321

Conread position: 1-410
Cow position: chr20:12420805-12420373 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 1-410
Cow position: chr20:14806702-14807129 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 209

Conread position: 1-410
Cow position: chr20:20967156-20967565 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 275
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 43

Conread position: 1-410
Cow position: chr20:26996346-26996780 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 190

Conread position: 1-411
Cow position: chr20:6054697-6054260 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 388

Conread position: 1-411
Cow position: chr20:6602857-6603276 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 239

Conread position: 1-411
Cow position: chr20:11340989-11340558 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 60, 193

Conread position: 1-411
Cow position: chr20:13023662-13023255 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 267
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 72

Conread position: 1-411
Cow position: chr20:13994625-13995057 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 176

Conread position: 1-411
Cow position: chr20:14759848-14759428 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 193

Conread position: 1-411
Cow position: chr20:17251524-17251966 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 213

Conread position: 1-411
Cow position: chr20:20983823-20984244 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 58

Conread position: 1-411
Cow position: chr20:22235131-22235546 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 163

Conread position: 1-411
Cow position: chr20:28296106-28296545 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 278
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 213

Conread position: 1-411
Cow position: chr20:28605021-28605453 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 202

Conread position: 1-411
Cow position: chr20:34098142-34097701 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 209

Conread position: 1-411
Cow position: chr20:34251862-34251422 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 1-411
Cow position: chr20:38817826-38818236 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 206

Conread position: 1-411
Cow position: chr20:40177066-40177491 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 177

Conread position: 1-411
Cow position: chr20:40304032-40303635 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 294, 81

Conread position: 1-412
Cow position: chr20:7426373-7425950 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 115

Conread position: 1-412
Cow position: chr20:12582131-12581708 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 128

Conread position: 1-414
Cow position: chr20:3599574-3599152 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 182

Conread position: 1-414
Cow position: chr20:4756009-4755584 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 277
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 44

Conread position: 1-414
Cow position: chr20:39398304-39398732 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 49

Conread position: 1-415
Cow position: chr20:8556458-8556013 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 219

Conread position: 1-415
Cow position: chr20:40423274-40422848 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 159

Conread position: 1-419
Cow position: chr20:4205779-4206208 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 211

Conread position: 1-420
Cow position: chr20:40256786-40257207 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 193

Conread position: 2-281
Cow position: chr20:21714570-21714873 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 206

Conread position: 2-325
Cow position: chr20:33363337-33363672 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 2-327
Cow position: chr20:9412309-9412645 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 138

Conread position: 2-333
Cow position: chr20:35907230-35906887 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 194

Conread position: 2-334
Cow position: chr20:10818408-10818075 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 135

Conread position: 2-334
Cow position: chr20:42469582-42469923 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 16

Conread position: 2-401
Cow position: chr20:40511941-40511535 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 114

Conread position: 2-408
Cow position: chr20:6258247-6257830 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 204

Conread position: 2-411
Cow position: chr20:11045495-11045921 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 183

Conread position: 3-184
Cow position: chr20:5104617-5104428 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 180

Conread position: 3-186
Cow position: chr20:21324945-21325135 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 125

Conread position: 3-247
Cow position: chr20:9473796-9473539 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 92

Conread position: 3-268
Cow position: chr20:21019383-21019659 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 221

Conread position: 3-273
Cow position: chr20:24000961-24000693 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 48

Conread position: 3-278
Cow position: chr20:9923415-9923676 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 99

Conread position: 3-281
Cow position: chr20:9536952-9537244 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 210

Conread position: 3-321
Cow position: chr20:19363544-19363212 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 307

Conread position: 3-327
Cow position: chr20:19459829-19459508 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 39

Conread position: 3-334
Cow position: chr20:5826755-5827104 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 233

Conread position: 3-374
Cow position: chr20:20203034-20203425 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 207

Conread position: 3-385
Cow position: chr20:31746807-31746415 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 271
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 200

Conread position: 3-394
Cow position: chr20:1139955-1139535 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 282

Conread position: 3-398
Cow position: chr20:24069629-24070036 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 3-402
Cow position: chr20:1640629-1640229 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 145

Conread position: 3-404
Cow position: chr20:5998846-5998421 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 158

Conread position: 3-407
Cow position: chr20:5950815-5950397 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 273
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 205

Conread position: 3-408
Cow position: chr20:7442305-7441898 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 110

Conread position: 3-408
Cow position: chr20:10208620-10209051 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 186

Conread position: 3-411
Cow position: chr20:7756811-7756390 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 192

Conread position: 3-411
Cow position: chr20:13269441-13269861 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 164

Conread position: 3-412
Cow position: chr20:14572538-14572129 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 195

Conread position: 3-419
Cow position: chr20:21372134-21372550 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 271
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 97

Conread position: 4-292
Cow position: chr20:35797424-35797732 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 99

Conread position: 4-293
Cow position: chr20:38551193-38551492 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 96

Conread position: 4-320
Cow position: chr20:11542464-11542135 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 220

Conread position: 4-393
Cow position: chr20:5702564-5702951 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 66

Conread position: 4-412
Cow position: chr20:746771-747180 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 16

Conread position: 5-242
Cow position: chr20:17903980-17904229 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 189

Conread position: 8-334
Cow position: chr20:581098-580756 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 110

Conread position: 8-411
Cow position: chr20:27408055-27407648 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 184

Conread position: 9-411
Cow position: chr20:3141407-3141822 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 272
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 124

Conread position: 10-412
Cow position: chr20:16935478-16935058 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 12-157
Cow position: chr20:9729924-9730070 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 29

Conread position: 12-291
Cow position: chr20:23065002-23064713 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 113

Conread position: 12-402
Cow position: chr20:19236905-19237309 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 192

Conread position: 15-334
Cow position: chr20:3321308-3320980 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 212

Conread position: 20-395
Cow position: chr20:2819386-2819779 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 131

Conread position: 20-412
Cow position: chr20:7439014-7438607 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 21-334
Cow position: chr20:18392408-18392107 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 38

Conread position: 21-368
Cow position: chr20:13652521-13652166 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 95

Conread position: 24-411
Cow position: chr20:32523307-32523710 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 258
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 176

Conread position: 25-293
Cow position: chr20:13794841-13795101 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 21

Conread position: 29-248
Cow position: chr20:10348594-10348827 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 43-407
Cow position: chr20:28249051-28249426 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 134

Conread position: 48-368
Cow position: chr20:11188930-11188610 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 12

Conread position: 48-409
Cow position: chr20:34107987-34108335 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 41

Conread position: 51-293
Cow position: chr20:26076959-26077206 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 70

Conread position: 51-334
Cow position: chr20:20241975-20242249 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 62

Conread position: 51-334
Cow position: chr20:22484735-22485023 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 133

Conread position: 51-407
Cow position: chr20:14433553-14433177 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 261

Conread position: 51-409
Cow position: chr20:4334645-4334293 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 101, 21

Conread position: 51-412
Cow position: chr20:2298902-2298544 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 9, 97

Conread position: 52-292
Cow position: chr20:28955827-28955578 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 127

Conread position: 52-410
Cow position: chr20:8546944-8547305 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 247

Conread position: 52-417
Cow position: chr20:13025734-13025369 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 101

Conread position: 53-343
Cow position: chr20:40691934-40692238 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 126

Conread position: 55-412
Cow position: chr20:6240640-6240272 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 138

Conread position: 57-285
Cow position: chr20:5385859-5385628 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 116

Conread position: 57-293
Cow position: chr20:21928787-21929029 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 122

Conread position: 57-310
Cow position: chr20:15235652-15235892 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 119

Conread position: 57-411
Cow position: chr20:10200230-10200597 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 84

Conread position: 59-238
Cow position: chr20:28831853-28832037 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 137

Conread position: 59-278
Cow position: chr20:7210925-7211148 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 90, 117

Conread position: 59-292
Cow position: chr20:12430909-12430676 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 127, 19

Conread position: 59-330
Cow position: chr20:22978206-22978487 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 77, 135

Conread position: 59-410
Cow position: chr20:25686463-25686121 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 161

Conread position: 60-249
Cow position: chr20:18837270-18837078 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 89, 119

Conread position: 60-252
Cow position: chr20:22704178-22704375 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 60-275
Cow position: chr20:6890602-6890820 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 118

Conread position: 60-290
Cow position: chr20:11482249-11482013 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 131

Conread position: 60-290
Cow position: chr20:35407749-35407972 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 189, 90

Conread position: 60-292
Cow position: chr20:14100549-14100312 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 8

Conread position: 60-293
Cow position: chr20:36633703-36633936 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 131

Conread position: 60-293
Cow position: chr20:40449896-40450146 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 60-321
Cow position: chr20:17845849-17846111 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 15

Conread position: 60-334
Cow position: chr20:20099707-20099437 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 14

Conread position: 60-340
Cow position: chr20:7362855-7363132 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 191, 146

Conread position: 60-347
Cow position: chr20:5636370-5636658 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 134

Conread position: 60-366
Cow position: chr20:32463635-32463323 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 60-395
Cow position: chr20:3254939-3255265 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 48

Conread position: 60-401
Cow position: chr20:14879676-14880023 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 43

Conread position: 60-402
Cow position: chr20:28441216-28441557 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 68

Conread position: 60-402
Cow position: chr20:32084195-32083861 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 238

Conread position: 60-407
Cow position: chr20:15569060-15568720 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 107

Conread position: 60-409
Cow position: chr20:5814460-5814815 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 40, 76

Conread position: 60-409
Cow position: chr20:8578134-8578495 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 117

Conread position: 60-409
Cow position: chr20:28594166-28594537 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 146

Conread position: 60-410
Cow position: chr20:28982585-28982945 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 208

Conread position: 60-410
Cow position: chr20:38431109-38430773 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 278, 85

Conread position: 60-411
Cow position: chr20:8307903-8308251 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 121

Conread position: 60-411
Cow position: chr20:14980625-14980260 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 45

Conread position: 60-411
Cow position: chr20:23792497-23792842 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 64

Conread position: 60-411
Cow position: chr20:41089904-41089545 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 60

Conread position: 60-412
Cow position: chr20:8429631-8429988 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 138

Conread position: 60-412
Cow position: chr20:9267211-9266852 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 9

Conread position: 60-414
Cow position: chr20:39743205-39743553 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 55

Conread position: 60-415
Cow position: chr20:11741414-11741065 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 113

Conread position: 60-415
Cow position: chr20:15312549-15312900 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 240

Conread position: 60-415
Cow position: chr20:34597213-34596850 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 89, 12

Conread position: 61-252
Cow position: chr20:34901459-34901652 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 10

Conread position: 61-411
Cow position: chr20:8703021-8702683 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 189, 13

Conread position: 62-322
Cow position: chr20:39267071-39266806 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 72, 140

Conread position: 62-330
Cow position: chr20:15565939-15565670 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 63

Conread position: 62-392
Cow position: chr20:36010681-36011016 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 118

Conread position: 62-408
Cow position: chr20:3740112-3739765 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 93

Conread position: 62-408
Cow position: chr20:35145901-35146258 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 135

Conread position: 64-394
Cow position: chr20:10188165-10188505 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 40

Conread position: 64-406
Cow position: chr20:382220-381892 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 10

Conread position: 65-410
Cow position: chr20:25351510-25351180 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 12

Conread position: 67-343
Cow position: chr20:19616379-19616669 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 68-292
Cow position: chr20:29404282-29404051 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 144

Conread position: 71-408
Cow position: chr20:11611578-11611925 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 113

Conread position: 71-411
Cow position: chr20:24711732-24712087 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 231

Conread position: 76-411
Cow position: chr20:15118178-15118525 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 77

Conread position: 76-417
Cow position: chr20:18379284-18379630 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 77-281
Cow position: chr20:23103123-23103335 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 77-407
Cow position: chr20:7738323-7737991 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 77-411
Cow position: chr20:35710075-35710407 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 245

Conread position: 78-411
Cow position: chr20:23286419-23286084 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 232, 63

Conread position: 82-278
Cow position: chr20:13983271-13983465 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 167, 55

Conread position: 82-411
Cow position: chr20:22265337-22265021 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 93

Conread position: 83-399
Cow position: chr20:41473818-41473515 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 45

Conread position: 85-397
Cow position: chr20:38873097-38872766 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 95

Conread position: 86-376
Cow position: chr20:32866275-32865987 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 36

Conread position: 86-410
Cow position: chr20:26077745-26077446 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 163, 66

Conread position: 86-411
Cow position: chr20:38868557-38868868 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 63, 10

Conread position: 86-412
Cow position: chr20:36741388-36741710 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 93

Conread position: 89-385
Cow position: chr20:6423887-6424175 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 34

Conread position: 89-407
Cow position: chr20:5644702-5645019 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 105

Conread position: 91-412
Cow position: chr20:23541240-23540923 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 93

Conread position: 93-395
Cow position: chr20:33819136-33819460 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 105

Conread position: 93-411
Cow position: chr20:16818335-16818665 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 23

Conread position: 94-391
Cow position: chr20:16548356-16548045 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 10

Conread position: 95-267
Cow position: chr20:17530494-17530315 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 67

Conread position: 97-401
Cow position: chr20:21204283-21204570 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 73

Conread position: 98-412
Cow position: chr20:5078548-5078884 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 204

Conread position: 99-402
Cow position: chr20:4892167-4891880 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 230, 32

Conread position: 99-402
Cow position: chr20:5009664-5009970 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 150, 73

Conread position: 99-412
Cow position: chr20:11548797-11548480 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 90

Conread position: 99-418
Cow position: chr20:11135831-11135497 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 51

Conread position: 100-409
Cow position: chr20:30887960-30888273 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 76

Conread position: 103-411
Cow position: chr20:11359694-11359392 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 40

Conread position: 103-417
Cow position: chr20:38089841-38090169 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 97

Conread position: 105-420
Cow position: chr20:33067432-33067103 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 19

Conread position: 108-402
Cow position: chr20:11008105-11008411 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 85

Conread position: 108-411
Cow position: chr20:9376402-9376709 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 105

Conread position: 111-391
Cow position: chr20:354959-354671 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 98

Conread position: 111-401
Cow position: chr20:7624309-7624022 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 81

Conread position: 112-397
Cow position: chr20:23850559-23850854 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 97

Conread position: 113-411
Cow position: chr20:21428105-21428405 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 24

Conread position: 115-359
Cow position: chr20:17100302-17100553 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 185

Conread position: 116-334
Cow position: chr20:38514724-38514940 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 58

Conread position: 120-330
Cow position: chr20:10772150-10772366 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 150

Conread position: 121-402
Cow position: chr20:11751602-11751892 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 34

Conread position: 124-398
Cow position: chr20:20898640-20898355 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 48

Conread position: 128-402
Cow position: chr20:4787059-4786794 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 128

Conread position: 144-366
Cow position: chr20:19060865-19060638 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 151

Conread position: 148-407
Cow position: chr20:12126326-12126058 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 45

Conread position: 152-409
Cow position: chr20:42166800-42166544 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 40

Conread position: 153-285
Cow position: chr20:1009722-1009590 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 6

Conread position: 175-411
Cow position: chr20:20158137-20158381 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 128

Conread position: 177-404
Cow position: chr20:3148691-3148921 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 13

Conread position: 180-407
Cow position: chr20:14490259-14490485 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 28

Conread position: 181-407
Cow position: chr20:33623543-33623316 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 105

Conread position: 185-402
Cow position: chr20:15529874-15530098 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 77

Conread position: 186-408
Cow position: chr20:24097015-24097239 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 115

Conread position: 201-402
Cow position: chr20:3564189-3564391 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 62

Conread position: 201-402
Cow position: chr20:36312479-36312273 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 96

Conread position: 201-410
Cow position: chr20:15766139-15766362 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 97

Conread position: 202-402
Cow position: chr20:23358461-23358256 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 133, 65

Conread position: 202-417
Cow position: chr20:5364960-5365181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 43

Conread position: 208-402
Cow position: chr20:19636140-19635940 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 89

Conread position: 208-404
Cow position: chr20:24314997-24314797 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 73

Conread position: 208-411
Cow position: chr20:21325362-21325572 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 97

Conread position: 211-366
Cow position: chr20:630564-630726 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 22

Conread position: 212-411
Cow position: chr20:13805357-13805563 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 6

Conread position: 213-412
Cow position: chr20:26041057-26040849 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 88

Conread position: 213-412
Cow position: chr20:27315023-27315224 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 32

Conread position: 217-411
Cow position: chr20:20590256-20590058 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 84

Conread position: 222-411
Cow position: chr20:11499062-11499250 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 23

Conread position: 238-402
Cow position: chr20:24491962-24491789 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 86

Conread position: 249-410
Cow position: chr20:16977764-16977591 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 49

Conread position: 251-411
Cow position: chr20:38061684-38061526 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 256-407
Cow position: chr20:41313474-41313623 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 34

Conread position: 257-411
Cow position: chr20:14755752-14755596 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 258-410
Cow position: chr20:23506024-23506185 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 40

Conread position: 266-411
Cow position: chr20:21169665-21169522 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 32

Conread position: 270-411
Cow position: chr20:11368261-11368117 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 28

Show alignments to all cow chromosomes.