Cow genome map

Conread name: Ss1.1-Pig4-TMW8045H10.3

Conread position: 1-146
Cow position: chr28:2888208-2888366 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 1-148
Cow position: chr28:13447487-13447634 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 74

Conread position: 1-148
Cow position: chr28:16243980-16243822 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 135

Conread position: 1-160
Cow position: chr28:11827272-11827441 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 157

Conread position: 1-166
Cow position: chr28:5658332-5658510 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 124

Conread position: 1-171
Cow position: chr28:16253079-16252896 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-176
Cow position: chr28:8656957-8656772 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 1-177
Cow position: chr28:22170939-22170746 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-177
Cow position: chr28:23839987-23840171 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 104, 62

Conread position: 1-180
Cow position: chr28:8348874-8348679 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 175

Conread position: 1-188
Cow position: chr28:15007943-15008142 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 1-197
Cow position: chr28:23775824-23776035 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 134

Conread position: 1-201
Cow position: chr28:7590403-7590186 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 207

Conread position: 1-211
Cow position: chr28:27428531-27428748 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 99

Conread position: 1-220
Cow position: chr28:26784688-26784453 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 205

Conread position: 1-226
Cow position: chr28:2905359-2905591 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 146

Conread position: 1-228
Cow position: chr28:10212919-10212699 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 1-229
Cow position: chr28:10762452-10762680 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 148, 55

Conread position: 1-232
Cow position: chr28:19222819-19222580 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 200

Conread position: 1-232
Cow position: chr28:24646319-24646561 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 149

Conread position: 1-266
Cow position: chr28:5904514-5904787 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 141

Conread position: 1-267
Cow position: chr28:7751522-7751241 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 151

Conread position: 1-271
Cow position: chr28:22485027-22485317 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 11

Conread position: 1-276
Cow position: chr28:7549284-7548989 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 54, 111

Conread position: 1-278
Cow position: chr28:10529704-10529419 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 156

Conread position: 1-278
Cow position: chr28:16109723-16110008 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 143

Conread position: 1-282
Cow position: chr28:10534151-10533860 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 16

Conread position: 1-285
Cow position: chr28:8408518-8408812 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 1-285
Cow position: chr28:21672577-21672871 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 151

Conread position: 1-292
Cow position: chr28:11786930-11786632 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 157

Conread position: 1-292
Cow position: chr28:16686811-16687111 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 131

Conread position: 1-292
Cow position: chr28:21598475-21598167 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 193

Conread position: 1-292
Cow position: chr28:23621326-23621622 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 129

Conread position: 1-293
Cow position: chr28:20313054-20313363 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 32

Conread position: 1-293
Cow position: chr28:23675922-23676224 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 182

Conread position: 1-312
Cow position: chr28:26922586-26922264 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 104

Conread position: 1-319
Cow position: chr28:8022332-8021992 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 40

Conread position: 1-321
Cow position: chr28:34561137-34561456 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 149

Conread position: 1-326
Cow position: chr28:4188312-4188674 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 122

Conread position: 1-326
Cow position: chr28:6971561-6971230 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 132

Conread position: 1-327
Cow position: chr28:26220040-26220375 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 280

Conread position: 1-334
Cow position: chr28:19026224-19025879 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 78

Conread position: 1-334
Cow position: chr28:29199505-29199856 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 1-347
Cow position: chr28:12619341-12619715 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 60, 195

Conread position: 1-357
Cow position: chr28:25596411-25596778 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 1-359
Cow position: chr28:4938617-4938958 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 121

Conread position: 1-376
Cow position: chr28:26103494-26103872 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 109

Conread position: 1-382
Cow position: chr28:10682039-10681642 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 36

Conread position: 1-382
Cow position: chr28:30303416-30303028 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 262
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 19

Conread position: 1-394
Cow position: chr28:13865624-13866015 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 258

Conread position: 1-394
Cow position: chr28:16346748-16346346 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 119

Conread position: 1-401
Cow position: chr28:1099863-1099478 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 1-401
Cow position: chr28:12430388-12430804 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 174

Conread position: 1-401
Cow position: chr28:33163689-33163277 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 264

Conread position: 1-402
Cow position: chr28:3024133-3023716 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 200

Conread position: 1-402
Cow position: chr28:9285599-9285177 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 268

Conread position: 1-402
Cow position: chr28:10589250-10588833 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 1-402
Cow position: chr28:21868230-21868657 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 207

Conread position: 1-402
Cow position: chr28:25727156-25727568 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 152

Conread position: 1-404
Cow position: chr28:7268157-7267747 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 29

Conread position: 1-407
Cow position: chr28:13267560-13267974 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 213

Conread position: 1-408
Cow position: chr28:21844734-21845156 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 224

Conread position: 1-408
Cow position: chr28:23459923-23460349 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 287
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 52, 213

Conread position: 1-409
Cow position: chr28:3144113-3143677 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 322

Conread position: 1-409
Cow position: chr28:5144744-5144307 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 143

Conread position: 1-409
Cow position: chr28:5826727-5827138 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 207

Conread position: 1-409
Cow position: chr28:16919383-16918967 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 147

Conread position: 1-410
Cow position: chr28:3493006-3492579 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 192

Conread position: 1-410
Cow position: chr28:12951211-12951624 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 196

Conread position: 1-410
Cow position: chr28:13474084-13474507 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 188

Conread position: 1-410
Cow position: chr28:26719139-26719538 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 1-410
Cow position: chr28:30608403-30607989 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 278
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 117

Conread position: 1-411
Cow position: chr28:2801021-2801436 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 279
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 71

Conread position: 1-411
Cow position: chr28:4070747-4071167 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 188

Conread position: 1-411
Cow position: chr28:5273647-5273218 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 277
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 50

Conread position: 1-411
Cow position: chr28:5817626-5818047 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 276
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 16

Conread position: 1-411
Cow position: chr28:7698204-7697770 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 207

Conread position: 1-411
Cow position: chr28:20124564-20124990 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 197

Conread position: 1-412
Cow position: chr28:5931132-5931554 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 141

Conread position: 1-412
Cow position: chr28:18625001-18625445 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 289
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 218

Conread position: 1-412
Cow position: chr28:22500704-22500296 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 35

Conread position: 1-412
Cow position: chr28:23410545-23410124 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 91

Conread position: 1-413
Cow position: chr28:5203978-5204395 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 94

Conread position: 1-413
Cow position: chr28:11527477-11527043 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 200

Conread position: 1-414
Cow position: chr28:16370296-16369877 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 179

Conread position: 1-414
Cow position: chr28:34133642-34134070 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 135

Conread position: 1-418
Cow position: chr28:20409183-20409607 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 59

Conread position: 2-166
Cow position: chr28:5188622-5188445 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 2-181
Cow position: chr28:16215113-16214930 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 71

Conread position: 2-228
Cow position: chr28:19394410-19394637 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 55

Conread position: 2-382
Cow position: chr28:10744989-10745395 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 206

Conread position: 2-394
Cow position: chr28:3914489-3914897 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 315

Conread position: 2-401
Cow position: chr28:9740251-9740657 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 58, 42

Conread position: 2-401
Cow position: chr28:34230009-34230430 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 176

Conread position: 2-409
Cow position: chr28:11884743-11884324 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 201

Conread position: 2-410
Cow position: chr28:11426766-11426340 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 202

Conread position: 2-411
Cow position: chr28:7865103-7865516 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 36

Conread position: 3-148
Cow position: chr28:13371387-13371236 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 5

Conread position: 3-170
Cow position: chr28:3077773-3077952 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 3-214
Cow position: chr28:5805305-5805514 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 148

Conread position: 3-226
Cow position: chr28:32747720-32747936 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 160, 32

Conread position: 3-228
Cow position: chr28:3751099-3751332 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 145

Conread position: 3-228
Cow position: chr28:7980638-7980399 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 156

Conread position: 3-267
Cow position: chr28:3256573-3256858 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 211

Conread position: 3-278
Cow position: chr28:11752364-11752068 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 149

Conread position: 3-281
Cow position: chr28:31110225-31109930 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 205

Conread position: 3-288
Cow position: chr28:25806363-25806654 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 47

Conread position: 3-290
Cow position: chr28:4536251-4536542 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 54

Conread position: 3-293
Cow position: chr28:18354538-18354247 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 143

Conread position: 3-332
Cow position: chr28:14649129-14649469 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 217

Conread position: 3-348
Cow position: chr28:25249136-25249495 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 115

Conread position: 3-377
Cow position: chr28:16211316-16210926 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 150

Conread position: 3-378
Cow position: chr28:16085105-16085490 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 186

Conread position: 3-393
Cow position: chr28:26743402-26743822 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 205

Conread position: 3-395
Cow position: chr28:27218101-27218518 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 218

Conread position: 3-398
Cow position: chr28:11585427-11585013 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 312

Conread position: 3-402
Cow position: chr28:7144569-7145000 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 219

Conread position: 3-402
Cow position: chr28:21502175-21502582 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 272
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 190

Conread position: 3-407
Cow position: chr28:8347515-8347939 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 3-407
Cow position: chr28:10606839-10606434 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 3-407
Cow position: chr28:15263944-15263513 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 277
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 288

Conread position: 3-407
Cow position: chr28:33036685-33036280 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 273
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 149

Conread position: 3-409
Cow position: chr28:11423023-11422612 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 3-409
Cow position: chr28:23793522-23793113 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 114

Conread position: 3-410
Cow position: chr28:22345800-22346230 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 3-411
Cow position: chr28:3078897-3078484 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 182

Conread position: 3-411
Cow position: chr28:3769874-3769474 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 272
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 69

Conread position: 3-411
Cow position: chr28:10053558-10053123 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 189

Conread position: 3-411
Cow position: chr28:22308438-22308853 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 276
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 30

Conread position: 3-411
Cow position: chr28:25056753-25057165 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 190

Conread position: 3-415
Cow position: chr28:5074724-5074308 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 87

Conread position: 3-415
Cow position: chr28:12964358-12964795 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 32

Conread position: 3-418
Cow position: chr28:22332330-22332745 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 19

Conread position: 4-267
Cow position: chr28:2738030-2737746 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 204

Conread position: 4-408
Cow position: chr28:30327300-30326895 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 213

Conread position: 4-411
Cow position: chr28:8787327-8787748 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 201

Conread position: 5-213
Cow position: chr28:16364186-16363962 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 5-408
Cow position: chr28:9426559-9426146 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 122

Conread position: 8-329
Cow position: chr28:12892634-12892313 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 68

Conread position: 8-333
Cow position: chr28:24017789-24018110 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 158

Conread position: 8-396
Cow position: chr28:14997849-14998258 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 9

Conread position: 9-402
Cow position: chr28:24672060-24672468 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 170

Conread position: 9-415
Cow position: chr28:23007939-23007529 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 296

Conread position: 12-350
Cow position: chr28:28163881-28164230 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 228

Conread position: 12-410
Cow position: chr28:29416927-29416517 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 12-415
Cow position: chr28:22371889-22371462 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 14-361
Cow position: chr28:16386714-16386360 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 189

Conread position: 14-402
Cow position: chr28:30293798-30293386 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 274
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 194

Conread position: 15-235
Cow position: chr28:5553136-5552913 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 60

Conread position: 18-394
Cow position: chr28:4090249-4089867 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 166

Conread position: 26-414
Cow position: chr28:14720960-14720572 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 13

Conread position: 27-321
Cow position: chr28:3169386-3169074 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 75

Conread position: 31-402
Cow position: chr28:616200-616569 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 81

Conread position: 32-411
Cow position: chr28:19564413-19564026 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 108

Conread position: 37-414
Cow position: chr28:21046744-21046378 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 136

Conread position: 42-396
Cow position: chr28:12933898-12933542 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 209, 33

Conread position: 44-340
Cow position: chr28:12946776-12947086 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 154

Conread position: 46-407
Cow position: chr28:33884240-33884607 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 51-264
Cow position: chr28:4057823-4058039 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 45

Conread position: 51-320
Cow position: chr28:15044021-15043750 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 101, 45

Conread position: 51-394
Cow position: chr28:21363584-21363932 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 51

Conread position: 51-408
Cow position: chr28:10669412-10669793 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 8

Conread position: 51-409
Cow position: chr28:23724618-23724262 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 112

Conread position: 51-410
Cow position: chr28:4016376-4016731 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 86

Conread position: 52-293
Cow position: chr28:18186394-18186642 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 17, 151

Conread position: 53-282
Cow position: chr28:17235885-17235661 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 195, 30

Conread position: 53-395
Cow position: chr28:4282648-4282296 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 24

Conread position: 55-410
Cow position: chr28:24082114-24082478 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 56-285
Cow position: chr28:14512367-14512611 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 48

Conread position: 57-334
Cow position: chr28:1632809-1632531 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 69, 34

Conread position: 57-402
Cow position: chr28:751074-751428 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 141

Conread position: 59-407
Cow position: chr28:16204481-16204126 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 123

Conread position: 59-409
Cow position: chr28:30746880-30746531 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 107

Conread position: 59-419
Cow position: chr28:13290284-13289940 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 164

Conread position: 60-182
Cow position: chr28:8935786-8935909 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 104

Conread position: 60-238
Cow position: chr28:15063486-15063311 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 60-239
Cow position: chr28:7608131-7607947 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 60-273
Cow position: chr28:4587948-4588163 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 116

Conread position: 60-291
Cow position: chr28:4841543-4841306 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 119, 77

Conread position: 60-291
Cow position: chr28:21380727-21380966 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 60-296
Cow position: chr28:2872766-2873008 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 0

Conread position: 60-314
Cow position: chr28:2862714-2862974 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 104

Conread position: 60-321
Cow position: chr28:13607736-13608013 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 45

Conread position: 60-321
Cow position: chr28:16841897-16841655 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 60-327
Cow position: chr28:5128877-5128606 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 193, 75

Conread position: 60-334
Cow position: chr28:10172561-10172291 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 48

Conread position: 60-336
Cow position: chr28:33051877-33052164 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 252

Conread position: 60-368
Cow position: chr28:11687180-11686852 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 187

Conread position: 60-372
Cow position: chr28:2132070-2131767 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 129, 29

Conread position: 60-375
Cow position: chr28:4809646-4809948 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 191, 56

Conread position: 60-388
Cow position: chr28:657600-657279 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 190, 111

Conread position: 60-395
Cow position: chr28:9684468-9684144 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 58

Conread position: 60-397
Cow position: chr28:34430574-34430228 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 149

Conread position: 60-398
Cow position: chr28:5684562-5684896 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 16

Conread position: 60-402
Cow position: chr28:9636604-9636257 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 117

Conread position: 60-402
Cow position: chr28:23616256-23616605 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 148

Conread position: 60-407
Cow position: chr28:6091212-6091561 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 103

Conread position: 60-407
Cow position: chr28:7439094-7439444 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 68

Conread position: 60-408
Cow position: chr28:8358753-8359106 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 16

Conread position: 60-408
Cow position: chr28:18934304-18934640 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 48

Conread position: 60-408
Cow position: chr28:26982894-26982530 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 135

Conread position: 60-409
Cow position: chr28:13527052-13527405 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 83

Conread position: 60-410
Cow position: chr28:29989264-29988900 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 126

Conread position: 60-410
Cow position: chr28:31841487-31841143 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 83

Conread position: 60-411
Cow position: chr28:4643914-4643561 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 46

Conread position: 60-411
Cow position: chr28:4834993-4834634 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 111

Conread position: 60-411
Cow position: chr28:4881396-4881040 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 144

Conread position: 60-411
Cow position: chr28:4884414-4884044 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 60-411
Cow position: chr28:5437239-5436877 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 220

Conread position: 60-411
Cow position: chr28:6059620-6059262 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 99

Conread position: 60-411
Cow position: chr28:11829089-11828750 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 82

Conread position: 60-411
Cow position: chr28:11866817-11866459 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 75

Conread position: 60-411
Cow position: chr28:24966241-24966594 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 12

Conread position: 60-411
Cow position: chr28:30937814-30937474 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 101

Conread position: 60-412
Cow position: chr28:4158807-4159174 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 112

Conread position: 61-382
Cow position: chr28:4138820-4138487 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 43

Conread position: 62-321
Cow position: chr28:18591124-18591383 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 115, 86

Conread position: 62-327
Cow position: chr28:2960981-2960711 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 75, 238

Conread position: 62-382
Cow position: chr28:4440154-4440479 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 60

Conread position: 62-402
Cow position: chr28:3746056-3746397 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 113

Conread position: 62-406
Cow position: chr28:7512737-7512376 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 174

Conread position: 64-181
Cow position: chr28:9108299-9108420 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 65-409
Cow position: chr28:27313891-27313522 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 65-411
Cow position: chr28:10057738-10057378 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 150

Conread position: 66-412
Cow position: chr28:10863927-10863590 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 87

Conread position: 68-292
Cow position: chr28:25283064-25283279 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 52

Conread position: 71-334
Cow position: chr28:27161470-27161201 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 11

Conread position: 71-412
Cow position: chr28:3740744-3741079 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 49

Conread position: 72-408
Cow position: chr28:22571804-22571478 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 109

Conread position: 73-330
Cow position: chr28:32365708-32365967 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 47

Conread position: 73-402
Cow position: chr28:19262727-19262384 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 95

Conread position: 76-408
Cow position: chr28:7009110-7008775 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 31

Conread position: 79-398
Cow position: chr28:8140350-8140680 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 96

Conread position: 82-409
Cow position: chr28:11346614-11346282 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 98

Conread position: 89-414
Cow position: chr28:5193197-5193535 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 11, 222

Conread position: 90-334
Cow position: chr28:32174510-32174755 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 16

Conread position: 90-398
Cow position: chr28:11079185-11079496 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 93

Conread position: 96-411
Cow position: chr28:25128768-25129093 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 205

Conread position: 98-411
Cow position: chr28:5577412-5577741 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 91

Conread position: 98-411
Cow position: chr28:22813152-22813457 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 99-412
Cow position: chr28:3011385-3011057 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 97

Conread position: 104-397
Cow position: chr28:12363268-12362965 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 187

Conread position: 108-382
Cow position: chr28:26055372-26055658 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 243

Conread position: 112-411
Cow position: chr28:4012990-4013292 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 115-394
Cow position: chr28:17071237-17071532 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 116-326
Cow position: chr28:16246158-16245947 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 65, 26

Conread position: 128-395
Cow position: chr28:4045769-4046037 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 208, 37

Conread position: 128-398
Cow position: chr28:7350574-7350846 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 69

Conread position: 130-334
Cow position: chr28:12070154-12070357 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 89

Conread position: 130-398
Cow position: chr28:5139078-5138803 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 176

Conread position: 136-408
Cow position: chr28:777598-777882 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 144-408
Cow position: chr28:3411055-3410783 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 28

Conread position: 144-411
Cow position: chr28:4181940-4182210 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 107, 29

Conread position: 145-409
Cow position: chr28:3445545-3445272 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 59

Conread position: 145-409
Cow position: chr28:10977780-10978045 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 58

Conread position: 145-410
Cow position: chr28:7619215-7618952 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 45

Conread position: 148-412
Cow position: chr28:4006736-4006991 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 35

Conread position: 150-394
Cow position: chr28:26531339-26531089 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 54

Conread position: 156-402
Cow position: chr28:2762142-2762372 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 95, 28

Conread position: 165-412
Cow position: chr28:10964379-10964618 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 229, 23

Conread position: 170-410
Cow position: chr28:19216783-19217020 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 21

Conread position: 174-402
Cow position: chr28:11816703-11816484 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 124

Conread position: 176-402
Cow position: chr28:6975210-6975434 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 12

Conread position: 177-401
Cow position: chr28:2279626-2279403 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 76

Conread position: 177-411
Cow position: chr28:9705620-9705865 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 117

Conread position: 178-408
Cow position: chr28:12991104-12991341 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 55, 129

Conread position: 179-410
Cow position: chr28:5254844-5255079 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 75, 11

Conread position: 186-410
Cow position: chr28:7132110-7131883 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 76, 15

Conread position: 186-412
Cow position: chr28:7557755-7557522 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 68, 23

Conread position: 190-409
Cow position: chr28:8304227-8304449 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 111

Conread position: 190-410
Cow position: chr28:5205251-5205459 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 111

Conread position: 191-410
Cow position: chr28:4101501-4101720 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 112

Conread position: 193-394
Cow position: chr28:16879556-16879760 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 108

Conread position: 197-401
Cow position: chr28:11016393-11016603 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 23

Conread position: 197-418
Cow position: chr28:8396322-8396546 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 100

Conread position: 201-402
Cow position: chr28:17739816-17740025 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 49

Conread position: 201-402
Cow position: chr28:29850824-29850622 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 100

Conread position: 201-407
Cow position: chr28:24996622-24996413 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 96

Conread position: 202-402
Cow position: chr28:4185898-4186103 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 91

Conread position: 202-408
Cow position: chr28:4364830-4364617 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 92

Conread position: 202-410
Cow position: chr28:19039027-19038810 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 105

Conread position: 202-411
Cow position: chr28:5630090-5630308 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 84

Conread position: 202-411
Cow position: chr28:15362571-15362787 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 145

Conread position: 203-409
Cow position: chr28:17949120-17948910 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 98

Conread position: 207-408
Cow position: chr28:11411539-11411333 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 107

Conread position: 208-407
Cow position: chr28:30902124-30902326 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 93

Conread position: 208-420
Cow position: chr28:17728101-17727894 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 210-402
Cow position: chr28:4876443-4876638 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 90

Conread position: 210-411
Cow position: chr28:21207368-21207168 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 92

Conread position: 213-411
Cow position: chr28:8936153-8936357 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 15

Conread position: 217-402
Cow position: chr28:10890728-10890542 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 36, 84

Conread position: 218-411
Cow position: chr28:16362526-16362332 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 79

Conread position: 218-415
Cow position: chr28:9109224-9109426 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 83

Conread position: 225-409
Cow position: chr28:8681411-8681230 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 226-408
Cow position: chr28:2777546-2777736 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 75

Conread position: 230-402
Cow position: chr28:26868128-26867954 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 20

Conread position: 234-401
Cow position: chr28:4866543-4866379 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 15

Conread position: 234-411
Cow position: chr28:3678386-3678568 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 62

Conread position: 249-402
Cow position: chr28:10762936-10763088 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 49

Conread position: 249-411
Cow position: chr28:26960867-26960704 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 49

Conread position: 249-412
Cow position: chr28:11305591-11305427 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 49

Conread position: 249-420
Cow position: chr28:17943772-17943941 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 45

Conread position: 255-411
Cow position: chr28:27787614-27787773 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 43

Conread position: 257-409
Cow position: chr28:24238427-24238277 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 45

Conread position: 259-411
Cow position: chr28:4588370-4588523 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 39

Conread position: 262-409
Cow position: chr28:7750961-7750814 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 36

Show alignments to all cow chromosomes.