Cow genome map

Conread name: Ss1.1-Pig4-TMW8045H10.3

Conread position: 1-146
Cow position: chr9:57951073-57951223 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-148
Cow position: chr9:22616879-22616722 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 100

Conread position: 1-163
Cow position: chr9:22440267-22440431 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 16

Conread position: 1-177
Cow position: chr9:25958670-25958485 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 29

Conread position: 1-180
Cow position: chr9:22227830-22228021 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 1-182
Cow position: chr9:3924872-3924685 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 153

Conread position: 1-182
Cow position: chr9:36623196-36623384 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-197
Cow position: chr9:29034783-29034985 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 195

Conread position: 1-201
Cow position: chr9:49404009-49403798 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 157

Conread position: 1-214
Cow position: chr9:60037912-60037680 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 1-215
Cow position: chr9:23028050-23027833 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 138

Conread position: 1-224
Cow position: chr9:18002693-18002934 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 1-244
Cow position: chr9:30195452-30195214 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 16

Conread position: 1-266
Cow position: chr9:27697474-27697753 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 92

Conread position: 1-267
Cow position: chr9:9416151-9416421 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 167

Conread position: 1-267
Cow position: chr9:35533695-35533979 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 195

Conread position: 1-271
Cow position: chr9:38344150-38343860 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 60, 0

Conread position: 1-278
Cow position: chr9:35850155-35849867 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 215

Conread position: 1-281
Cow position: chr9:14796522-14796810 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 122

Conread position: 1-281
Cow position: chr9:22696473-22696183 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 50, 201

Conread position: 1-281
Cow position: chr9:63746060-63745775 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 181

Conread position: 1-282
Cow position: chr9:26434811-26435100 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 189

Conread position: 1-282
Cow position: chr9:49764912-49764620 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 117

Conread position: 1-285
Cow position: chr9:5509980-5509680 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 183

Conread position: 1-285
Cow position: chr9:35904495-35904789 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 188

Conread position: 1-286
Cow position: chr9:38961182-38961475 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 199

Conread position: 1-290
Cow position: chr9:5763374-5763680 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 151

Conread position: 1-291
Cow position: chr9:22114377-22114686 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 226

Conread position: 1-291
Cow position: chr9:25922079-25921773 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 23

Conread position: 1-292
Cow position: chr9:1950175-1949866 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 32

Conread position: 1-292
Cow position: chr9:9461399-9461708 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 220

Conread position: 1-292
Cow position: chr9:33093200-33092908 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 27

Conread position: 1-292
Cow position: chr9:64050299-64050613 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 180

Conread position: 1-293
Cow position: chr9:8534427-8534742 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 195

Conread position: 1-293
Cow position: chr9:9405799-9406105 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 186

Conread position: 1-293
Cow position: chr9:19714325-19714028 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 155

Conread position: 1-293
Cow position: chr9:37069313-37069611 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 187

Conread position: 1-293
Cow position: chr9:55890065-55889762 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 150

Conread position: 1-293
Cow position: chr9:62442538-62442238 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 19

Conread position: 1-311
Cow position: chr9:49689192-49688894 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 56

Conread position: 1-312
Cow position: chr9:5319885-5319552 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 285

Conread position: 1-312
Cow position: chr9:32371504-32371821 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 183

Conread position: 1-324
Cow position: chr9:3782619-3782286 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 183

Conread position: 1-327
Cow position: chr9:5218923-5219257 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 61, 199

Conread position: 1-332
Cow position: chr9:21888425-21888080 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 201

Conread position: 1-332
Cow position: chr9:34468337-34468670 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 23

Conread position: 1-333
Cow position: chr9:33598237-33597895 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 186

Conread position: 1-333
Cow position: chr9:62357275-62357619 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 52, 185

Conread position: 1-334
Cow position: chr9:40542370-40542044 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 191

Conread position: 1-334
Cow position: chr9:50080790-50081132 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 190

Conread position: 1-334
Cow position: chr9:54528771-54528422 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 106

Conread position: 1-334
Cow position: chr9:60110489-60110158 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 111

Conread position: 1-340
Cow position: chr9:5246105-5245753 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 139

Conread position: 1-351
Cow position: chr9:55074879-55075235 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 186

Conread position: 1-352
Cow position: chr9:9199528-9199892 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 118

Conread position: 1-361
Cow position: chr9:9624772-9625128 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 43

Conread position: 1-368
Cow position: chr9:43871228-43870854 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 306

Conread position: 1-375
Cow position: chr9:8546574-8546199 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 228
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 135

Conread position: 1-378
Cow position: chr9:64091944-64091544 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 317

Conread position: 1-381
Cow position: chr9:23388422-23388825 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 171

Conread position: 1-390
Cow position: chr9:29006816-29006405 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 95

Conread position: 1-393
Cow position: chr9:3070167-3070574 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 277
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 185

Conread position: 1-394
Cow position: chr9:10011056-10010654 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 191

Conread position: 1-394
Cow position: chr9:29184877-29185298 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 307

Conread position: 1-395
Cow position: chr9:26057192-26057588 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 193

Conread position: 1-395
Cow position: chr9:52484661-52485071 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 252
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 265

Conread position: 1-396
Cow position: chr9:51566231-51566658 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 276
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 16

Conread position: 1-397
Cow position: chr9:20321860-20322253 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 22

Conread position: 1-397
Cow position: chr9:59013079-59013499 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 313

Conread position: 1-399
Cow position: chr9:61739173-61738758 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 153

Conread position: 1-401
Cow position: chr9:6933816-6934246 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 137

Conread position: 1-401
Cow position: chr9:16300315-16300739 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 23

Conread position: 1-401
Cow position: chr9:30402164-30402594 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 220

Conread position: 1-401
Cow position: chr9:56032072-56032482 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 103

Conread position: 1-401
Cow position: chr9:58451841-58452235 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 81

Conread position: 1-402
Cow position: chr9:17871851-17872273 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 316

Conread position: 1-402
Cow position: chr9:22638356-22637933 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 276
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 169

Conread position: 1-402
Cow position: chr9:34287050-34286632 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 1-404
Cow position: chr9:55118334-55117914 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 29

Conread position: 1-407
Cow position: chr9:5327510-5327091 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 91

Conread position: 1-407
Cow position: chr9:20942355-20942790 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 9

Conread position: 1-407
Cow position: chr9:21459901-21460324 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 118

Conread position: 1-407
Cow position: chr9:28773373-28772970 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 194

Conread position: 1-407
Cow position: chr9:32732430-32732834 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 281
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 137

Conread position: 1-407
Cow position: chr9:45285275-45285710 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 104

Conread position: 1-408
Cow position: chr9:28948108-28947714 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 128

Conread position: 1-408
Cow position: chr9:34901859-34902269 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 283
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 113

Conread position: 1-409
Cow position: chr9:1751590-1751156 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 127

Conread position: 1-409
Cow position: chr9:18381115-18380694 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 1-409
Cow position: chr9:20091294-20090887 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 16

Conread position: 1-409
Cow position: chr9:23541162-23541573 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 294
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 112

Conread position: 1-409
Cow position: chr9:56453588-56453173 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 174

Conread position: 1-410
Cow position: chr9:5226908-5227334 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 219

Conread position: 1-410
Cow position: chr9:9516514-9516922 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 164

Conread position: 1-410
Cow position: chr9:30138382-30137949 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 56, 291

Conread position: 1-410
Cow position: chr9:47906033-47906459 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 393

Conread position: 1-411
Cow position: chr9:5433891-5433470 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 301

Conread position: 1-411
Cow position: chr9:6192203-6192632 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-411
Cow position: chr9:8998611-8998178 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 359

Conread position: 1-411
Cow position: chr9:9402929-9403346 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 34

Conread position: 1-411
Cow position: chr9:9595698-9596125 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 199

Conread position: 1-411
Cow position: chr9:11299441-11299848 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 1-411
Cow position: chr9:13670892-13670461 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 176

Conread position: 1-411
Cow position: chr9:21030572-21030129 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 295
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 207

Conread position: 1-411
Cow position: chr9:22318594-22318186 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 121

Conread position: 1-411
Cow position: chr9:26278917-26279348 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 183

Conread position: 1-411
Cow position: chr9:34689356-34689780 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 84

Conread position: 1-411
Cow position: chr9:36490639-36491079 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 313

Conread position: 1-411
Cow position: chr9:42498085-42497653 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 203

Conread position: 1-411
Cow position: chr9:51620692-51620269 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 202

Conread position: 1-411
Cow position: chr9:53257804-53258231 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 281
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 169

Conread position: 1-411
Cow position: chr9:54681758-54681346 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 183

Conread position: 1-412
Cow position: chr9:5501107-5500688 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 259

Conread position: 1-412
Cow position: chr9:13205314-13205744 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 58, 34

Conread position: 1-412
Cow position: chr9:28726470-28726905 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 1-412
Cow position: chr9:35167424-35166993 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 196

Conread position: 1-412
Cow position: chr9:41679991-41679586 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 1-412
Cow position: chr9:47869263-47868848 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 282
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 121

Conread position: 1-412
Cow position: chr9:61846894-61847291 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 175

Conread position: 1-414
Cow position: chr9:22151831-22152261 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 242

Conread position: 1-419
Cow position: chr9:19903308-19902910 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 71

Conread position: 2-171
Cow position: chr9:9491048-9490863 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 2-252
Cow position: chr9:6225197-6225463 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 205

Conread position: 2-292
Cow position: chr9:9823265-9823557 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 187, 55

Conread position: 2-292
Cow position: chr9:59386522-59386820 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 131

Conread position: 2-326
Cow position: chr9:62657047-62656719 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 109

Conread position: 2-334
Cow position: chr9:8288871-8288526 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 7

Conread position: 2-368
Cow position: chr9:7410037-7409638 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 324

Conread position: 2-408
Cow position: chr9:44822047-44822494 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 334

Conread position: 2-409
Cow position: chr9:48118447-48118860 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 277
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 126

Conread position: 3-204
Cow position: chr9:29330399-29330602 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 22

Conread position: 3-218
Cow position: chr9:34666663-34666446 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 179

Conread position: 3-230
Cow position: chr9:20810807-20811051 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 156

Conread position: 3-235
Cow position: chr9:1712231-1712467 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 16

Conread position: 3-235
Cow position: chr9:33681938-33681683 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 211

Conread position: 3-247
Cow position: chr9:4128530-4128784 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 205

Conread position: 3-270
Cow position: chr9:36827379-36827106 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 143

Conread position: 3-278
Cow position: chr9:5161812-5162087 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 173

Conread position: 3-278
Cow position: chr9:35375678-35375389 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 275

Conread position: 3-279
Cow position: chr9:6089351-6089051 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 295

Conread position: 3-282
Cow position: chr9:10118411-10118700 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 51, 185

Conread position: 3-282
Cow position: chr9:41789532-41789243 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 19

Conread position: 3-285
Cow position: chr9:33940861-33940561 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 200

Conread position: 3-292
Cow position: chr9:5594754-5594452 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 195

Conread position: 3-292
Cow position: chr9:44914841-44915148 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 204

Conread position: 3-293
Cow position: chr9:9443343-9443653 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 206

Conread position: 3-326
Cow position: chr9:17310308-17310645 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 80

Conread position: 3-333
Cow position: chr9:55084043-55084392 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 50, 121

Conread position: 3-334
Cow position: chr9:18342977-18342639 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 142

Conread position: 3-372
Cow position: chr9:44831801-44832184 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 183

Conread position: 3-376
Cow position: chr9:18072864-18073227 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 58, 5

Conread position: 3-398
Cow position: chr9:5836416-5835988 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 212

Conread position: 3-403
Cow position: chr9:26086321-26085890 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 288
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 203

Conread position: 3-407
Cow position: chr9:17740690-17741115 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 3-407
Cow position: chr9:20900876-20901289 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 58, 197

Conread position: 3-409
Cow position: chr9:33668961-33668571 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 261
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 184, 54

Conread position: 3-409
Cow position: chr9:58979655-58979232 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 263

Conread position: 3-410
Cow position: chr9:8724050-8723620 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 149

Conread position: 3-410
Cow position: chr9:26404043-26403621 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 202

Conread position: 3-410
Cow position: chr9:28747268-28747692 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 3-411
Cow position: chr9:15215427-15215865 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 208

Conread position: 3-411
Cow position: chr9:26344730-26345137 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 52

Conread position: 3-411
Cow position: chr9:34374675-34375101 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 167

Conread position: 3-411
Cow position: chr9:34697041-34697477 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 299
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 198

Conread position: 3-412
Cow position: chr9:25546888-25546481 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 279
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 110

Conread position: 4-135
Cow position: chr9:53109779-53109642 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 4-244
Cow position: chr9:10092140-10092393 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 177

Conread position: 4-296
Cow position: chr9:38614713-38615017 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 138

Conread position: 4-327
Cow position: chr9:31814125-31814471 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 314

Conread position: 4-341
Cow position: chr9:42445729-42446080 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 307

Conread position: 4-408
Cow position: chr9:13169415-13169837 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 4-409
Cow position: chr9:9723629-9724052 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 113

Conread position: 4-410
Cow position: chr9:50606700-50607104 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 192

Conread position: 4-411
Cow position: chr9:20681154-20681577 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 277
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 41

Conread position: 5-409
Cow position: chr9:10144220-10144654 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 245

Conread position: 5-411
Cow position: chr9:8636904-8636503 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 52

Conread position: 8-232
Cow position: chr9:21840324-21840084 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 178

Conread position: 8-261
Cow position: chr9:22361264-22360990 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 115

Conread position: 8-293
Cow position: chr9:7634516-7634219 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 8-398
Cow position: chr9:20848185-20847784 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 272

Conread position: 8-410
Cow position: chr9:24887449-24887031 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 8-411
Cow position: chr9:9753146-9753577 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 178

Conread position: 8-411
Cow position: chr9:20579371-20579763 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 49

Conread position: 9-265
Cow position: chr9:34742480-34742748 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 135

Conread position: 9-408
Cow position: chr9:55256301-55256721 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 10-394
Cow position: chr9:34957804-34958210 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 200

Conread position: 11-408
Cow position: chr9:43757769-43757373 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 11-412
Cow position: chr9:6397539-6397962 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 271
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 196

Conread position: 12-151
Cow position: chr9:23970693-23970831 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 12-334
Cow position: chr9:50139526-50139193 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 199

Conread position: 12-407
Cow position: chr9:8548054-8547638 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 273
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 37

Conread position: 13-404
Cow position: chr9:33823342-33822949 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 126

Conread position: 13-411
Cow position: chr9:32815882-32815477 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 268
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 170

Conread position: 15-267
Cow position: chr9:44921164-44921419 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 42

Conread position: 16-148
Cow position: chr9:49279703-49279572 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 31

Conread position: 19-291
Cow position: chr9:29825274-29824979 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 190

Conread position: 21-230
Cow position: chr9:59507317-59507103 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 120

Conread position: 25-201
Cow position: chr9:31292920-31292727 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 183

Conread position: 28-410
Cow position: chr9:25805049-25804654 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 14

Conread position: 30-411
Cow position: chr9:30477557-30477947 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 134

Conread position: 37-322
Cow position: chr9:60027406-60027117 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 22

Conread position: 37-408
Cow position: chr9:25557173-25556811 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 44-398
Cow position: chr9:11123279-11123642 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 226

Conread position: 46-319
Cow position: chr9:46316586-46316858 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 85

Conread position: 48-227
Cow position: chr9:50667624-50667438 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 139

Conread position: 51-202
Cow position: chr9:14358359-14358201 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 146

Conread position: 51-293
Cow position: chr9:1973139-1972896 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 141

Conread position: 51-352
Cow position: chr9:43443992-43443700 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 94

Conread position: 51-411
Cow position: chr9:43048429-43048792 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 129

Conread position: 51-411
Cow position: chr9:45141408-45141771 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 52-287
Cow position: chr9:48106924-48107162 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 124

Conread position: 53-281
Cow position: chr9:7363218-7362988 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 54-411
Cow position: chr9:11168922-11168570 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 130

Conread position: 57-293
Cow position: chr9:49417176-49416935 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 125

Conread position: 57-352
Cow position: chr9:28354707-28354407 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 240

Conread position: 57-394
Cow position: chr9:52578348-52578696 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 243

Conread position: 57-420
Cow position: chr9:3387880-3387532 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 137

Conread position: 59-281
Cow position: chr9:8317279-8317488 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 59-291
Cow position: chr9:58204846-58204623 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 188, 45

Conread position: 59-409
Cow position: chr9:64106094-64105730 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 200

Conread position: 59-416
Cow position: chr9:40543134-40543498 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 121

Conread position: 59-419
Cow position: chr9:52637973-52638353 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 60-181
Cow position: chr9:53608209-53608334 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 60-185
Cow position: chr9:8525020-8524891 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 15

Conread position: 60-198
Cow position: chr9:41652971-41652827 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 60-210
Cow position: chr9:4928813-4928659 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 60-219
Cow position: chr9:5238578-5238421 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 60-228
Cow position: chr9:1879562-1879396 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 101

Conread position: 60-265
Cow position: chr9:1952083-1952294 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 123

Conread position: 60-277
Cow position: chr9:214282-214497 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 85

Conread position: 60-287
Cow position: chr9:37678073-37677848 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 62

Conread position: 60-292
Cow position: chr9:34310216-34309978 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 158

Conread position: 60-293
Cow position: chr9:49710024-49709795 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 96

Conread position: 60-293
Cow position: chr9:62668438-62668196 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 76

Conread position: 60-312
Cow position: chr9:19493277-19493536 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 239

Conread position: 60-312
Cow position: chr9:23430960-23431217 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 138

Conread position: 60-320
Cow position: chr9:766967-767227 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 137

Conread position: 60-320
Cow position: chr9:20416327-20416584 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 58

Conread position: 60-326
Cow position: chr9:11319448-11319718 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 91, 239

Conread position: 60-326
Cow position: chr9:50076244-50075980 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 137

Conread position: 60-327
Cow position: chr9:9654126-9654392 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 85, 140

Conread position: 60-327
Cow position: chr9:31078899-31079164 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 89, 29

Conread position: 60-332
Cow position: chr9:30652523-30652799 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 12

Conread position: 60-334
Cow position: chr9:1520548-1520831 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 140

Conread position: 60-334
Cow position: chr9:8563023-8562730 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 90, 254

Conread position: 60-334
Cow position: chr9:19067963-19067692 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 189, 76

Conread position: 60-334
Cow position: chr9:51204906-51204640 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 116, 85

Conread position: 60-336
Cow position: chr9:11313324-11313608 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 149

Conread position: 60-336
Cow position: chr9:18216918-18217193 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 189, 119

Conread position: 60-337
Cow position: chr9:4267798-4268079 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 89, 106

Conread position: 60-337
Cow position: chr9:8338212-8337932 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 56

Conread position: 60-347
Cow position: chr9:56773265-56772972 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 75

Conread position: 60-352
Cow position: chr9:61997413-61997715 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 127

Conread position: 60-381
Cow position: chr9:33119700-33120036 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 241

Conread position: 60-392
Cow position: chr9:55287712-55288045 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 279, 82

Conread position: 60-397
Cow position: chr9:17799813-17799474 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 17

Conread position: 60-397
Cow position: chr9:22443436-22443784 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 132

Conread position: 60-397
Cow position: chr9:53138945-53139296 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 136

Conread position: 60-399
Cow position: chr9:31347140-31346786 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 44

Conread position: 60-401
Cow position: chr9:38793199-38792850 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 117

Conread position: 60-402
Cow position: chr9:53762883-53762533 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 80

Conread position: 60-402
Cow position: chr9:58614675-58614331 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 121

Conread position: 60-404
Cow position: chr9:8937330-8936980 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 68

Conread position: 60-404
Cow position: chr9:30124106-30123762 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 165

Conread position: 60-406
Cow position: chr9:15805739-15806096 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 57

Conread position: 60-407
Cow position: chr9:32676868-32676506 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 133

Conread position: 60-408
Cow position: chr9:6879952-6879628 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 66

Conread position: 60-408
Cow position: chr9:36410170-36410522 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 132

Conread position: 60-409
Cow position: chr9:6840193-6839819 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 250

Conread position: 60-409
Cow position: chr9:9552273-9551916 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 41

Conread position: 60-409
Cow position: chr9:33218766-33219132 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 153

Conread position: 60-410
Cow position: chr9:4861574-4861222 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 144

Conread position: 60-410
Cow position: chr9:41283209-41282838 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 148

Conread position: 60-410
Cow position: chr9:61303189-61302829 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 242

Conread position: 60-411
Cow position: chr9:4340984-4341331 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 115

Conread position: 60-411
Cow position: chr9:5442178-5441836 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 221

Conread position: 60-412
Cow position: chr9:28983365-28983024 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 44

Conread position: 60-412
Cow position: chr9:40302943-40303311 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 92

Conread position: 60-412
Cow position: chr9:48628213-48627847 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 71

Conread position: 60-412
Cow position: chr9:56065734-56065390 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 274, 46

Conread position: 60-415
Cow position: chr9:19555560-19555210 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 237

Conread position: 60-417
Cow position: chr9:44710011-44709652 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 118

Conread position: 61-285
Cow position: chr9:24873019-24872792 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 61-397
Cow position: chr9:9815598-9815252 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 9

Conread position: 61-402
Cow position: chr9:55321822-55321488 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 59

Conread position: 61-411
Cow position: chr9:41728440-41728085 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 7

Conread position: 61-412
Cow position: chr9:58447938-58448302 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 107

Conread position: 62-412
Cow position: chr9:42264401-42264045 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 154

Conread position: 63-293
Cow position: chr9:24997339-24997569 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 14

Conread position: 63-334
Cow position: chr9:3738039-3738316 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 107

Conread position: 63-393
Cow position: chr9:12910216-12910557 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 63-411
Cow position: chr9:55795939-55795583 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 87, 45

Conread position: 64-293
Cow position: chr9:43875540-43875771 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 40

Conread position: 64-411
Cow position: chr9:8901042-8901404 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 23

Conread position: 65-411
Cow position: chr9:51720721-51721062 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 65-411
Cow position: chr9:52689444-52689789 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 58

Conread position: 66-402
Cow position: chr9:10650124-10650454 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 10

Conread position: 66-410
Cow position: chr9:47445847-47446192 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 101

Conread position: 66-411
Cow position: chr9:12281149-12280798 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 73

Conread position: 67-407
Cow position: chr9:40215422-40215076 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 39, 112

Conread position: 68-334
Cow position: chr9:50543246-50543517 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 28

Conread position: 71-228
Cow position: chr9:4323983-4324141 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 112

Conread position: 72-293
Cow position: chr9:17928933-17928705 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 107

Conread position: 72-332
Cow position: chr9:17518315-17518579 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 117

Conread position: 72-339
Cow position: chr9:49292970-49293237 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 103

Conread position: 72-380
Cow position: chr9:44833790-44834110 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 120

Conread position: 75-281
Cow position: chr9:50202740-50202533 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 85

Conread position: 76-403
Cow position: chr9:60394881-60395216 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 120

Conread position: 76-411
Cow position: chr9:6851898-6852226 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 173

Conread position: 76-411
Cow position: chr9:26477386-26477037 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 67

Conread position: 76-413
Cow position: chr9:19034510-19034178 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 108

Conread position: 77-409
Cow position: chr9:5263669-5263331 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 43

Conread position: 77-411
Cow position: chr9:5456005-5456351 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 101

Conread position: 77-411
Cow position: chr9:48564251-48563900 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 138

Conread position: 83-293
Cow position: chr9:3774327-3774113 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 98

Conread position: 83-411
Cow position: chr9:47590817-47591159 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 74

Conread position: 84-411
Cow position: chr9:3378906-3378587 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 199, 41

Conread position: 85-340
Cow position: chr9:11303917-11304173 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 100

Conread position: 85-394
Cow position: chr9:39211768-39211453 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 114

Conread position: 85-407
Cow position: chr9:27356081-27355747 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 19

Conread position: 85-407
Cow position: chr9:27358867-27358533 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 19

Conread position: 86-293
Cow position: chr9:58670887-58670690 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 89-287
Cow position: chr9:5077564-5077758 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 161, 37

Conread position: 89-390
Cow position: chr9:52267600-52267916 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 61, 90

Conread position: 89-411
Cow position: chr9:27279466-27279131 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 87

Conread position: 91-409
Cow position: chr9:39011322-39011640 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 52

Conread position: 93-231
Cow position: chr9:42509267-42509129 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 82

Conread position: 95-407
Cow position: chr9:63896686-63896375 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 55

Conread position: 96-412
Cow position: chr9:7953049-7952726 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 95

Conread position: 97-412
Cow position: chr9:32669799-32670122 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 96

Conread position: 99-393
Cow position: chr9:3186274-3185972 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 80

Conread position: 99-407
Cow position: chr9:8628776-8629083 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 99-408
Cow position: chr9:62940898-62941193 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 150, 55

Conread position: 99-411
Cow position: chr9:4262946-4263263 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 134

Conread position: 99-411
Cow position: chr9:34284094-34283780 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 79, 63

Conread position: 100-411
Cow position: chr9:62724682-62724367 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 156

Conread position: 101-411
Cow position: chr9:1867594-1867296 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 88

Conread position: 105-291
Cow position: chr9:41486100-41486293 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 108-411
Cow position: chr9:1877868-1878173 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 84

Conread position: 111-293
Cow position: chr9:26310637-26310454 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 26

Conread position: 111-361
Cow position: chr9:6596100-6596350 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 39, 66

Conread position: 111-402
Cow position: chr9:44396794-44396493 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 84

Conread position: 111-412
Cow position: chr9:6189237-6189539 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 79

Conread position: 111-412
Cow position: chr9:31359735-31359429 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 83

Conread position: 111-415
Cow position: chr9:36628238-36627942 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 37

Conread position: 114-412
Cow position: chr9:34410264-34410569 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 65

Conread position: 116-404
Cow position: chr9:4630234-4629941 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 72

Conread position: 120-408
Cow position: chr9:17840554-17840851 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 122-410
Cow position: chr9:52518701-52518995 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 177

Conread position: 125-410
Cow position: chr9:33584562-33584858 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 93

Conread position: 125-411
Cow position: chr9:9311975-9311684 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 125, 25

Conread position: 125-411
Cow position: chr9:37199238-37198952 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 129, 7

Conread position: 128-405
Cow position: chr9:20465849-20466113 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 15

Conread position: 128-408
Cow position: chr9:53109370-53109079 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 176

Conread position: 129-409
Cow position: chr9:41785337-41785048 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 183

Conread position: 129-412
Cow position: chr9:54493254-54492962 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 21, 9

Conread position: 132-402
Cow position: chr9:23955870-23956143 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 62

Conread position: 138-410
Cow position: chr9:59997931-59998204 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 8

Conread position: 141-411
Cow position: chr9:5342152-5342420 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 5

Conread position: 144-291
Cow position: chr9:28754917-28754766 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 48

Conread position: 144-321
Cow position: chr9:32981974-32982154 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 46

Conread position: 144-392
Cow position: chr9:29194925-29195188 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 111, 17

Conread position: 144-411
Cow position: chr9:9460073-9459814 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 33

Conread position: 146-412
Cow position: chr9:13460323-13460584 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 89

Conread position: 148-395
Cow position: chr9:21387516-21387271 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 39

Conread position: 150-412
Cow position: chr9:29819807-29819550 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 23

Conread position: 154-411
Cow position: chr9:34024789-34024524 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 100, 147

Conread position: 155-327
Cow position: chr9:54615214-54615385 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 34

Conread position: 155-398
Cow position: chr9:9686327-9686580 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 29

Conread position: 172-402
Cow position: chr9:2037500-2037270 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 145, 18

Conread position: 175-411
Cow position: chr9:63361650-63361886 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 74, 122

Conread position: 176-407
Cow position: chr9:57131561-57131327 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 14

Conread position: 178-387
Cow position: chr9:59835023-59834821 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 190-412
Cow position: chr9:4241460-4241232 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 213

Conread position: 190-414
Cow position: chr9:33151796-33151571 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 115

Conread position: 191-411
Cow position: chr9:22440430-22440647 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 13

Conread position: 193-408
Cow position: chr9:11098405-11098623 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 56

Conread position: 197-409
Cow position: chr9:58131906-58132121 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 99

Conread position: 201-334
Cow position: chr9:55354654-55354519 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 105

Conread position: 202-394
Cow position: chr9:22165671-22165875 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 99

Conread position: 202-400
Cow position: chr9:60355170-60355364 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 99

Conread position: 202-408
Cow position: chr9:12337944-12337728 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 99

Conread position: 202-411
Cow position: chr9:7805919-7806129 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 99

Conread position: 202-411
Cow position: chr9:59897631-59897421 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 125, 40

Conread position: 202-412
Cow position: chr9:13742565-13742361 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 103

Conread position: 203-402
Cow position: chr9:23970855-23971059 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 103

Conread position: 203-411
Cow position: chr9:3924484-3924281 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 122

Conread position: 210-412
Cow position: chr9:42586522-42586723 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 91

Conread position: 211-378
Cow position: chr9:43202367-43202193 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 86

Conread position: 213-402
Cow position: chr9:27345553-27345755 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 88

Conread position: 214-401
Cow position: chr9:34707282-34707475 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 64

Conread position: 215-402
Cow position: chr9:40603697-40603501 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 86

Conread position: 215-412
Cow position: chr9:42508861-42508652 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 91

Conread position: 218-401
Cow position: chr9:12773716-12773529 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 78

Conread position: 222-412
Cow position: chr9:5186845-5187035 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 114, 72

Conread position: 223-398
Cow position: chr9:26394329-26394510 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 19

Conread position: 223-418
Cow position: chr9:32878075-32877872 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 59

Conread position: 224-394
Cow position: chr9:1712686-1712866 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 81

Conread position: 224-407
Cow position: chr9:19718320-19718505 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 77

Conread position: 225-418
Cow position: chr9:24079321-24079123 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 76

Conread position: 226-408
Cow position: chr9:40984523-40984332 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 81

Conread position: 226-412
Cow position: chr9:36401647-36401836 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 75

Conread position: 226-418
Cow position: chr9:55807649-55807452 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 75

Conread position: 227-409
Cow position: chr9:32052293-32052103 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 74

Conread position: 228-411
Cow position: chr9:32773229-32773047 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 77

Conread position: 234-411
Cow position: chr9:22447284-22447469 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 67

Conread position: 238-402
Cow position: chr9:11873302-11873461 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 11

Conread position: 239-415
Cow position: chr9:61300972-61301156 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 66

Conread position: 241-409
Cow position: chr9:34666444-34666279 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 243-411
Cow position: chr9:9495154-9494984 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 51

Conread position: 246-409
Cow position: chr9:53323789-53323960 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 52

Conread position: 249-402
Cow position: chr9:14519388-14519541 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 55

Conread position: 249-402
Cow position: chr9:44918288-44918444 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 45

Conread position: 249-410
Cow position: chr9:33101123-33101279 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 249-411
Cow position: chr9:12269022-12268860 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 47

Conread position: 249-415
Cow position: chr9:11380654-11380823 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 49

Conread position: 259-410
Cow position: chr9:30194993-30194837 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 43

Conread position: 302-408
Cow position: chr9:60036559-60036455 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.