Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8045I23.3
        

               Conread position:
               3-83
               

               Cow position:
               chr24:27108223-27108143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-228
               

               Cow position:
               chr24:27107347-27107202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               138
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-460
               

               Cow position:
               chr24:27105823-27105554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               434-591
               

               Cow position:
               chr24:27101883-27101726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               585-696
               

               Cow position:
               chr24:27099415-27099307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               678-771
               

               Cow position:
               chr24:27091873-27091780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               790-904
               

               Cow position:
               chr24:27091452-27091338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               902-1004
               

               Cow position:
               chr24:27090559-27090457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1003-1285
               

               Cow position:
               chr24:27088252-27087969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 252
               

               Conread position:
               1278-1378
               

               Cow position:
               chr24:27087935-27087835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 94
               
Show alignments to all cow chromosomes.